Data search
Results for MligTC455_22806
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22806 | 482 | 10.04 | Mlig455_001302 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.381/0.02439 |
TBPL1 | Mlig455_001302 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=114.7]} {Human: ENSG00000028839, TBPL1, TATA-box binding protein like 1, [RH, Score=166, Expect=2e-49]} {Mouse: ENSMUSG00000071359, Tbpl1, TATA box binding protein-like 1, [RH, Score=166, Expect=1e-49]} {Dmel: FBgn0261793, Trf2, TATA box binding protein-related factor 2, [Score=161, Expect=9e-44]} {Celegans: WBGene00006542, tbp-1, TATA-box-binding protein, [Score=130, Expect=1e-34]} {Smed: dd_Smed_v6_17006_0_1, dd_Smed_v6_17006_0_1, [Score=106, Expect=2e-26]} {RNA1509_4579} {RNA1310_3410, RNA1509_4579} {RNA1509_4579, RNA815_18482} |
Cumulative graph for MligTC455_22806
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.126 | 3.818 | 0.90436 | 1.00000 | |
| RegionR2 | -0.225 | 3.818 | 0.71313 | 1.00000 | |
| RegionR3 | -0.409 | 3.818 | 0.37738 | 0.91058 | |
| RegionR4 | 1.381 | 3.818 | 0.00298 | 0.02439 | |
| RegionR5 | 1.137 | 3.818 | 0.00138 | 0.01321 | |
| RegionR6 | -0.421 | 3.818 | 0.38582 | 0.96293 | |
| RegionR7 | -1.233 | 3.818 | 0.10050 | 0.60546 | |
| RegionR8 | -0.355 | 3.818 | 0.66939 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.807 | 3.818 | 0.22167 | 0.95604 | |
| RegenerationR2 | 1.287 | 3.818 | 0.01060 | 0.16642 | |
| RegenerationR3 | 1.03 | 3.818 | 0.05837 | 0.41407 | |
| RegenerationR4 | -0.55 | 3.818 | 0.26332 | 0.71095 | |
| RegenerationR5 | 0.143 | 3.818 | 0.72534 | 0.96137 | |
| RegenerationR6 | 1.129 | 3.818 | 0.04208 | 0.25605 | |
| RegenerationBL | 1.023 | 3.818 | 0.17904 | 0.50772 | |
| RegenerationTP | 0.728 | 3.818 | 0.38546 | 0.81922 |
Genes with expression patterns similar to MligTC455_22806
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22806 | 482 | 10.04 | Mlig455_001302 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 1.381/0.02439 |
TBPL1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_001302 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=114.7]} {Human: ENSG00000028839, TBPL1, TATA-box binding protein like 1, [RH, Score=166, Expect=2e-49]} {Mouse: ENSMUSG00000071359, Tbpl1, TATA box binding protein-like 1, [RH, Score=166, Expect=1e-49]} {Dmel: FBgn0261793, Trf2, TATA box binding protein-related factor 2, [Score=161, Expect=9e-44]} {Celegans: WBGene00006542, tbp-1, TATA-box-binding protein, [Score=130, Expect=1e-34]} {Smed: dd_Smed_v6_17006_0_1, dd_Smed_v6_17006_0_1, [Score=106, Expect=2e-26]} {RNA1509_4579} {RNA1310_3410, RNA1509_4579} {RNA1509_4579, RNA815_18482} |
| 2. | MligTC455_22805 | 472 | 9.83 | Mlig455_001140 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.391/0.01072 |
TBPL1 | 5.688 | 0.998 | 0.936 | 0.966 | 0.917 | 0.880 | 0.991 | Mlig455_001140 {REF} {Length: 3177} {TRANSSPLICED} {Pfam: Transcription factor TFIID (or TATA-binding protein, TBP) [PF00352.23, score=114.7]} {Human: ENSG00000028839, TBPL1, TATA-box binding protein like 1, [RH, Score=166, Expect=3e-49]} {Mouse: ENSMUSG00000071359, Tbpl1, TATA box binding protein-like 1, [RH, Score=166, Expect=2e-49]} {Dmel: FBgn0261793, Trf2, TATA box binding protein-related factor 2, [Score=161, Expect=8e-44]} {Celegans: WBGene00006542, tbp-1, TATA-box-binding protein, [Score=130, Expect=1e-34]} {Smed: dd_Smed_v6_10894_0_1, dd_Smed_v6_10894_0_1, [RH, Score=100, Expect=9e-24]} {RNA1509_4579, RNA1509_56915} {RNA1310_3410, RNA1509_56915} {RNA1509_56915, RNA815_18415} |
| 3. | MligTC455_15939 | 1099 | 22.89 | Mlig455_011669, Mlig455_049918 | Neo: Germline Age: Up-Down-Up Region-specific R4: 2.996 Region-enriched R4: 1.761/0.00914 |
SERAC1 | 2.577 | 0.770 | 0.841 | - | - | - | 0.966 | Mlig455_011669 {REF} {Length: 2563} {TRANSSPLICED} {Pfam: Putative serine esterase (DUF676) [PF05057.16, score=22.0]} {Human: ENSG00000122335, SERAC1, serine active site containing 1, [RH, Score=130, Expect=2e-31]} {Mouse: ENSMUSG00000015659, Serac1, serine active site containing 1, [RH, Score=130, Expect=2e-31]} {Dmel: FBgn0039430, CG5455, [RH, Score=91.7, Expect=5e-19]} {Celegans: WBGene00008925, F17H10.1, [RH, Score=111, Expect=1e-25]} {Smed: dd_Smed_v6_7655_0_1, dd_Smed_v6_7655_0_1, [RH, Score=157, Expect=2e-41]} {RNA1509_7857} {RNA1310_11884.1, RNA1509_7857} {RNA1509_7857, RNA815_14956} Mlig455_049918 {REF} {Length: 2185} {TRANSSPLICED} {Pfam: Putative serine esterase (DUF676) [PF05057.16, score=22.0]} {Human: ENSG00000122335, SERAC1, serine active site containing 1, [RH, Score=130, Expect=2e-31]} {Mouse: ENSMUSG00000015659, Serac1, serine active site containing 1, [RH, Score=130, Expect=2e-31]} {Dmel: FBgn0039430, CG5455, [RH, Score=92.0, Expect=5e-19]} {Celegans: WBGene00008925, F17H10.1, [RH, Score=111, Expect=1e-25]} {Smed: dd_Smed_v6_7655_0_1, dd_Smed_v6_7655_0_1, [RH, Score=157, Expect=2e-41]} {RNA1509_7857} {RNA1310_11884.1} {RNA815_14956} |
| 4. | MligTC455_44404 | 1497 | 31.19 | Mlig455_001573 | Neo: Irradiation Age: - Region-specific R4: 3.161 Region-enriched R4: 1.799/0.00000 Regeneration-downregulated R4: -2.215 Regeneration-depleted R4: -2.215 |
BRCA1 | 2.495 | 0.710 | 0.822 | - | - | - | 0.963 | Mlig455_001573 {REF} {Length: 1099} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=29.2]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=23.3]} {Human: ENSG00000012048, BRCA1, BRCA1, DNA repair associated, [RH, Score=119, Expect=2e-29]} {Mouse: ENSMUSG00000017146, Brca1, breast cancer 1, early onset, [RH, Score=112, Expect=7e-26]} {Celegans: WBGene00000264, brc-1, BRCa homolog (Tumor suppressor gene Brca1), [Score=60.8, Expect=1e-09]} {RNA1509_8035} {RNA1310_8504.2} {RNA815_14377} |
| 5. | MligTC455_01383 | 207 | 4.32 | Mlig455_006582 | Neo: - Age: - |
EDRF1 | 1.706 | - | - | - | 0.953 | - | 0.753 | Mlig455_006582 {REF} {Length: 4325} {TRANSSPLICED} {Human: ENSG00000107938, EDRF1, erythroid differentiation regulatory factor 1, [RH, Score=203, Expect=1e-52]} {Mouse: ENSMUSG00000039990, Edrf1, erythroid differentiation regulatory factor 1, [RH, Score=211, Expect=3e-55]} {Dmel: FBgn0035923, CG6511, [Score=228, Expect=8e-61]} {Smed: dd_Smed_v6_6203_0_1, dd_Smed_v6_6203_0_1, [RH, Score=185, Expect=1e-47]} {RNA1509_12637} {RNA1310_1900.1, RNA1509_12637} {RNA1509_12637, RNA815_1389.1} |
| 6. | MligTC455_37000 | 879 | 18.31 | Mlig455_014002 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.301 Region-enriched R5: 2.293/0.00000 |
PIWIL2 | 1.685 | - | 0.735 | - | - | - | 0.950 | Mlig455_014002 {REF} {Length: 4047} {TRANSSPLICED} {Pfam: Piwi domain [PF02171.19, score=254.6]; PAZ domain [PF02170.24, score=101.2]} {Human: ENSG00000197181, PIWIL2, piwi like RNA-mediated gene silencing 2, [RH, Score=478, Expect=9e-154]} {Mouse: ENSMUSG00000033644, Piwil2, piwi-like RNA-mediated gene silencing 2, [RH, Score=492, Expect=5e-159]} {Dmel: FBgn0250816, AGO3, Argonaute 3, [RH, Score=503, Expect=1e-164]} {Celegans: WBGene00004178, prg-1, Piwi-like protein, [RH, Score=400, Expect=4e-126]} {Smed: dd_Smed_v6_1258_0_1, dd_Smed_v6_1258_0_1, [RH, Score=568, Expect=0.0]} {RNA1509_28867, RNA1509_3459, RNA1509_46283, RNA1509_49214} {RNA1310_2376, RNA1509_28867, RNA1509_3459, RNA1509_46283, RNA1509_49214} {RNA1509_28867, RNA1509_3459, RNA1509_46283, RNA1509_49214, RNA815_980} |
| 7. | MligTC455_48066 | 328 | 6.84 | Mlig455_036125, Mlig455_036160 | Neo: - Age: - Region-enriched R2: 2.674/0.01484 |
1.671 | - | 0.720 | - | - | - | 0.951 | Mlig455_036125 {REF} {Length: 1205} {NoTransDecoderORF} {RNA1509_25368} {RNA1310_58162} {RNA815_17371} Mlig455_036160 {REF} {Length: 2487} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=204.5]; Sulfotransferase family [PF13469.8, score=22.2]} {Smed: dd_Smed_v6_5024_0_1, dd_Smed_v6_5024_0_1, [Score=168, Expect=2e-51]} {RNA1509_29042} {RNA1310_28759.2} {RNA815_17371} |
|
| 8. | MligTC455_38797 | 792 | 16.49 | Mlig455_024169, Mlig455_024189 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.215/0.01657 |
EDEM2 | 0.974 | - | - | - | - | - | 0.974 | Mlig455_024169 {REF} {Length: 1916} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=360.5]} {Human: ENSG00000088298, EDEM2, ER degradation enhancing alpha-mannosidase like protein 2, [RH, Score=598, Expect=0.0]} {Mouse: ENSMUSG00000038312, Edem2, ER degradation enhancer, mannosidase alpha-like 2, [RH, Score=607, Expect=0.0]} {Dmel: FBgn0023511, Edem1, ER degradation enhancer, mannosidase alpha-like 1, [RH, Score=602, Expect=0.0]} {Celegans: WBGene00008646, F10C2.5, alpha-1,2-Mannosidase, [RH, Score=553, Expect=0.0]} {Smed: dd_Smed_v6_7363_0_1, dd_Smed_v6_7363_0_1, [RH, Score=618, Expect=0.0]} {RNA1509_25116} {RNA1310_3599.2} {RNA815_2981.1} Mlig455_024189 {REF} {Length: 2736} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=359.8]} {Human: ENSG00000088298, EDEM2, ER degradation enhancing alpha-mannosidase like protein 2, [RH, Score=598, Expect=0.0]} {Mouse: ENSMUSG00000038312, Edem2, ER degradation enhancer, mannosidase alpha-like 2, [RH, Score=608, Expect=0.0]} {Dmel: FBgn0023511, Edem1, ER degradation enhancer, mannosidase alpha-like 1, [RH, Score=601, Expect=0.0]} {Celegans: WBGene00008646, F10C2.5, alpha-1,2-Mannosidase, [RH, Score=555, Expect=0.0]} {Smed: dd_Smed_v6_7363_0_1, dd_Smed_v6_7363_0_1, [RH, Score=619, Expect=0.0]} {RNA1509_24142} {RNA1310_3599.2} {RNA815_2981.1} |
| 9. | MligTC455_41687 | 1319 | 27.47 | Mlig455_065436, Mlig455_067200 | Neo: Int S/G2/M Age: Down-Up-Up, logFC(26M/2M)=0.268 Region-specific R5: 1.722 Region-enriched R5: 1.741/0.00000 |
CRCP | 0.958 | - | - | - | - | - | 0.958 | Mlig455_065436 {REF} {Length: 524} {TRANSSPLICED} {Pfam: RNA polymerase Rpb4 [PF03874.18, score=73.8]} {Human: ENSG00000241258, CRCP, CGRP receptor component, [RH, Score=61.2, Expect=3e-12]} {Mouse: ENSMUSG00000025532, Crcp, calcitonin gene-related peptide-receptor component protein, [RH, Score=58.9, Expect=1e-11]} {RNA1509_24920} {RNA1310_66593} {RNA815_24495} Mlig455_067200 {REF} {Length: 524} {TRANSSPLICED} {Pfam: RNA polymerase Rpb4 [PF03874.18, score=73.8]} {Human: ENSG00000241258, CRCP, CGRP receptor component, [RH, Score=61.2, Expect=3e-12]} {Mouse: ENSMUSG00000025532, Crcp, calcitonin gene-related peptide-receptor component protein, [RH, Score=58.9, Expect=1e-11]} {RNA1509_24920, RNA1509_35655, RNA1509_40192} {RNA1310_66593, RNA1509_24920, RNA1509_35655, RNA1509_40192} {RNA1509_24920, RNA1509_35655, RNA1509_40192, RNA815_24495} |
| 10. | MligTC455_52017 | 167 | 3.48 | Mlig455_067647 | Neo: Irradiation Age: - Region-enriched R5: 2.117/0.02703 |
0.954 | - | - | - | - | - | 0.954 | Mlig455_067647 {REF} {Length: 1606} {TRANSSPLICED} {Pfam: Protein aurora borealis N-terminus [PF15280.8, score=21.2]} {RNA1509_41161, RNA1509_55413} {RNA1310_19202.1, RNA1509_41161, RNA1509_55413} {RNA1509_41161, RNA1509_55413, RNA815_21758} | |
| 11. | MligTC455_19706 | 198 | 4.12 | Mlig455_049566 | Neo: Int S/G2/M Age: - |
DNA2 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_049566 {REF} {Length: 5005} {TRANSSPLICED} {Pfam: AAA domain [PF13087.8, score=141.8]; DNA replication factor Dna2 [PF08696.13, score=130.0]; AAA domain [PF13086.8, score=117.0]; AAA domain [PF13604.8, score=53.2]; AAA domain [PF13245.8, score=31.7]; Viral (Superfamily 1) RNA helicase [PF01443.20, score=20.1]; Threonylcarbamoyl adenosine biosynthesis protein TsaE [PF02367.19, score=19.6]; AAA domain [PF13481.8, score=18.3]} {Human: ENSG00000138346, DNA2, DNA replication helicase/nuclease 2, [RH, Score=411, Expect=2e-124]} {Mouse: ENSMUSG00000036875, Dna2, DNA replication helicase/nuclease 2, [RH, Score=416, Expect=2e-126]} {Dmel: FBgn0030170, CG2990, [RH, Score=364, Expect=3e-107]} {Celegans: WBGene00001016, dna-2, Yeast DNA helicase/endonuclease family, [RH, Score=351, Expect=7e-103]} {Smed: dd_Smed_v6_12638_0_1, dd_Smed_v6_12638_0_1, [RH, Score=404, Expect=1e-121]} {RNA1509_15095} {RNA1310_5852, RNA1509_15095} {RNA1509_15095, RNA815_1653.1} |
| 12. | MligTC455_44606 | 95 | 1.97 | Mlig455_031339 | Neo: - Age: - |
CHRNA9 | 0.95 | - | - | - | 0.950 | - | - | Mlig455_031339 {REF} {Length: 3943} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=143.9]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=114.8]} {Human: ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=213, Expect=9e-62]} {Mouse: ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=209, Expect=1e-60]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=196, Expect=1e-55]} {Celegans: WBGene00000050, acr-11, AcetylCholine Receptor, [Score=189, Expect=2e-53]} {Smed: dd_Smed_v6_10322_0_1, dd_Smed_v6_10322_0_1, [RH, Score=446, Expect=4e-151]} {RNA1509_46245, RNA1509_58340} {RNA1310_16441, RNA1509_58340} {RNA1509_58340, RNA815_17572} |