Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_02205 | 14 | 0.29 | Mlig455_027460 | Neo: - Age: - |
WDR17 | Mlig455_027460 {REF} {Length: 4333} {Pfam: WD domain, G-beta repeat [PF00400.34, score=104.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=57.5]} {Human: ENSG00000150627, WDR17, WD repeat domain 17, [Score=842, Expect=0.0]} {Mouse: ENSMUSG00000039375, Wdr17, WD repeat domain 17, [Score=858, Expect=0.0]} {Dmel: FBgn0263933, ebi, [Score=84.7, Expect=3e-16]} {Celegans: WBGene00004767, sel-10, F-box/WD repeat-containing protein sel-10, [Score=88.6, Expect=1e-17]} {Smed: dd_Smed_v6_2866_0_1, dd_Smed_v6_2866_0_1, [Score=80.9, Expect=3e-16]} {RNA1310_124405} {RNA815_31576} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | - | - | - | - | |
RegionR2 | - | - | - | - | |
RegionR3 | - | - | - | - | |
RegionR4 | - | - | - | - | |
RegionR5 | - | - | - | - | |
RegionR6 | - | - | - | - | |
RegionR7 | - | - | - | - | |
RegionR8 | - | - | - | - |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | - | - | - | - | |
RegenerationR2 | - | - | - | - | |
RegenerationR3 | - | - | - | - | |
RegenerationR4 | - | - | - | - | |
RegenerationR5 | - | - | - | - | |
RegenerationR6 | - | - | - | - | |
RegenerationBL | - | - | - | - | |
RegenerationTP | - | - | - | - |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_02205 | 14 | 0.29 | Mlig455_027460 | Neo: - Age: - |
WDR17 | 1 | - | - | - | - | 1.000 | - | Mlig455_027460 {REF} {Length: 4333} {Pfam: WD domain, G-beta repeat [PF00400.34, score=104.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=57.5]} {Human: ENSG00000150627, WDR17, WD repeat domain 17, [Score=842, Expect=0.0]} {Mouse: ENSMUSG00000039375, Wdr17, WD repeat domain 17, [Score=858, Expect=0.0]} {Dmel: FBgn0263933, ebi, [Score=84.7, Expect=3e-16]} {Celegans: WBGene00004767, sel-10, F-box/WD repeat-containing protein sel-10, [Score=88.6, Expect=1e-17]} {Smed: dd_Smed_v6_2866_0_1, dd_Smed_v6_2866_0_1, [Score=80.9, Expect=3e-16]} {RNA1310_124405} {RNA815_31576} |
2. | MligTC455_23239 | 32 | 0.67 | Mlig455_030867 | Neo: - Age: - |
PRKCB | 0.997 | - | - | - | - | 0.997 | - | Mlig455_030867 {REF} {Length: 3999} {Pfam: Protein kinase domain [PF00069.27, score=228.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=131.0]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=118.5]; C2 domain [PF00168.32, score=93.9]; Protein kinase C terminal domain [PF00433.26, score=35.3]; C1 domain [PF03107.18, score=22.2]; Kinase-like [PF14531.8, score=19.0]} {Human: ENSG00000166501, PRKCB, protein kinase C beta, [RH, Score=962, Expect=0.0]; ENSG00000154229, PRKCA, protein kinase C alpha, [RH, Score=952, Expect=0.0]} {Mouse: ENSMUSG00000052889, Prkcb, protein kinase C, beta, [RH, Score=963, Expect=0.0]; ENSMUSG00000050965, Prkca, protein kinase C, alpha, [RH, Score=952, Expect=0.0]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [RH, Score=941, Expect=0.0]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [RH, Score=940, Expect=0.0]} {Smed: dd_Smed_v6_4244_0_2, dd_Smed_v6_4244_0_2, [RH, Score=1049, Expect=0.0]} {RNA1509_51260} {RNA1310_9698, RNA1509_51260} {RNA1509_51260, RNA815_24870} |
3. | MligTC455_15747 | 66 | 1.38 | Mlig455_044205 | Neo: - Age: Down-Up-Up |
0.99 | - | - | - | - | 0.990 | - | Mlig455_044205 {REF} {Length: 935} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_28325.2} {RNA815_29746} | |
4. | MligTC455_13789 | 45 | 0.93 | Mlig455_015853 | Neo: Irradiation Age: Down-Up-Down |
SYT7 | 0.987 | - | - | - | - | 0.987 | - | Mlig455_015853 {REF} {Length: 2964} {Pfam: C2 domain [PF00168.32, score=37.6]} {Human: ENSG00000011347, SYT7, synaptotagmin 7, [Score=57.8, Expect=1e-08]} {Mouse: ENSMUSG00000024743, Syt7, synaptotagmin VII, [Score=53.9, Expect=1e-07]} {Smed: dd_Smed_v6_20523_0_1, dd_Smed_v6_20523_0_1, [Score=82.0, Expect=3e-17]} {RNA1509_40740} {RNA1310_34364} {RNA815_36355} |
5. | MligTC455_10753 | 13 | 0.27 | Mlig455_036562 | Neo: - Age: - |
0.984 | - | - | - | - | 0.984 | - | Mlig455_036562 {REF} {Length: 1200} | |
6. | MligTC455_18935 | 141 | 2.93 | Mlig455_012123, Mlig455_029004 | Neo: - Age: logFC(26M/2M)=-1.032 |
IRF1 | 0.98 | - | - | - | - | 0.980 | - | Mlig455_012123 {REF} {Length: 1962} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=61.2]} {Human: ENSG00000125347, IRF1, interferon regulatory factor 1, [Score=58.9, Expect=3e-09]} {Mouse: ENSMUSG00000018899, Irf1, interferon regulatory factor 1, [Score=58.5, Expect=4e-09]; ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [Score=55.8, Expect=3e-08]} {RNA1509_44213} {RNA1310_27978.1} {RNA815_17421} Mlig455_029004 {REF} {Length: 1330} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=59.6]} {Human: ENSG00000125347, IRF1, interferon regulatory factor 1, [Score=57.4, Expect=4e-09]; ENSG00000168310, IRF2, interferon regulatory factor 2, [Score=55.1, Expect=3e-08]} {Mouse: ENSMUSG00000018899, Irf1, interferon regulatory factor 1, [Score=56.6, Expect=6e-09]; ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [Score=54.7, Expect=2e-08]} {RNA1310_27978.1} {RNA815_17421} |
7. | MligTC455_08055 | 15 | 0.32 | Mlig455_001917 | Neo: - Age: - |
0.978 | - | - | - | - | 0.978 | - | Mlig455_001917 {REF} {Length: 754} {NoTransDecoderORF} {RNA1509_12583} {RNA1310_111677} | |
8. | MligTC455_08812 | 20 | 0.42 | Mlig455_054364 | Neo: - Age: - |
LIMK1 | 0.978 | - | - | - | - | 0.978 | - | Mlig455_054364 {REF} {Length: 1447} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=105.5]; Protein kinase domain [PF00069.27, score=95.1]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=20.0]} {Human: ENSG00000106683, LIMK1, LIM domain kinase 1, [Score=120, Expect=9e-30]; ENSG00000182541, LIMK2, LIM domain kinase 2, [Score=116, Expect=1e-28]} {Mouse: ENSMUSG00000029674, Limk1, LIM-domain containing, protein kinase, [Score=120, Expect=5e-30]; ENSMUSG00000020451, Limk2, LIM motif-containing protein kinase 2, [Score=116, Expect=4e-29]} {Dmel: FBgn0283712, LIMK1, LIM domain kinase 1, [Score=129, Expect=2e-33]} {Celegans: WBGene00003030, lin-45, Raf homolog serine/threonine-protein kinase, [Score=84.7, Expect=4e-18]} {Smed: dd_Smed_v6_9329_0_1, dd_Smed_v6_9329_0_1, [RH, Score=102, Expect=2e-24]} {RNA1509_32349} {RNA1310_20379.1} {RNA815_32665} |
9. | MligTC455_22257 | 24 | 0.49 | Mlig455_002961 | Neo: - Age: - |
0.978 | - | - | - | - | 0.978 | - | Mlig455_002961 {REF} {Length: 1429} {NoTransDecoderORF} {RNA1509_19236} {RNA1310_28041.2} {RNA815_50832.1} | |
10. | MligTC455_03465 | 10 | 0.21 | Mlig455_066976 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_066976 {REF} {Length: 746} {NoTransDecoderORF} {RNA1310_90111} | |
11. | MligTC455_08025 | 12 | 0.25 | Mlig455_069437 | Neo: - Age: - |
0.97 | - | - | - | - | 0.970 | - | Mlig455_069437 {REF} {Length: 817} {NoTransDecoderORF} {RNA1509_36807} {RNA1310_149325} {RNA815_52347} | |
12. | MligTC455_28871 | 42 | 0.88 | Mlig455_014977, Mlig455_045105, Mlig455_070240 | Neo: Irradiation |
NYNRIN | 0.97 | - | - | - | - | 0.970 | - | Mlig455_014977 {REF} {Length: 5538} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=43.5, Expect=4e-07]} {RNA1509_43263} {RNA1310_12394.1} {RNA815_22479} Mlig455_045105 {REF} {Length: 712} {Pfam: Integrase core domain [PF00665.28, score=48.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=48.5, Expect=1e-05]} {Smed: dd_Smed_v6_3718_0_1, dd_Smed_v6_3718_0_1, [Score=66.2, Expect=3e-12]} {RNA1509_43263} {RNA1310_12394.2} {RNA815_26248.2} Mlig455_070240 {REF} {Length: 8589} {TRANSSPLICED} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=43.5, Expect=4e-07]} {RNA1509_43263} {RNA1310_12394.1, RNA1509_43263} {RNA1509_43263, RNA815_166} |
13. | MligTC455_11681 | 9 | 0.19 | Mlig455_022655 | Neo: - Age: - |
0.969 | - | - | - | - | 0.969 | - | Mlig455_022655 {REF} {Length: 693} {NoTransDecoderORF} {RNA1310_74751.2} | |
14. | MligTC455_42364 | 9 | 0.2 | Mlig455_007252 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_007252 {REF} {Length: 523} {RNA1509_2515} {RNA1310_11307} {RNA815_3258.1} | |
15. | MligTC455_15974 | 179 | 3.73 | Mlig455_046153, Mlig455_046238 | Neo: - Age: - Region-enriched R2: 9.367/0.02495 |
0.962 | - | - | - | - | 0.962 | - | Mlig455_046153 {REF} {Length: 345} {Pfam: Pancreatic hormone peptide [PF00159.20, score=36.0]} {RNA1310_79109} {RNA815_46493} Mlig455_046238 {REF} {Length: 211} {NoTransDecoderORF} {RNA1310_79109} {RNA815_46493} |
|
16. | MligTC455_41483 | 50 | 1.05 | Mlig455_006754 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_006754 {REF} {Length: 3493} {RNA1310_64559} {RNA815_57833} | |
17. | MligTC455_43020 | 180 | 3.74 | Mlig455_066595 | Neo: Int S/G2/M Age: - |
TRIT1 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_066595 {REF} {Length: 5766} {TRANSSPLICED} {Pfam: IPP transferase [PF01715.19, score=210.8]; AAA ATPase domain [PF13191.8, score=23.1]; Isopentenyl transferase [PF01745.18, score=20.3]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=20.1]; Zinc-finger of C2H2 type [PF12874.9, score=19.7]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=19.3]; AAA domain [PF13671.8, score=19.0]} {Human: ENSG00000043514, TRIT1, tRNA isopentenyltransferase 1, [RH, Score=285, Expect=1e-90]} {Mouse: ENSMUSG00000028653, Trit1, tRNA isopentenyltransferase 1, [RH, Score=288, Expect=6e-92]} {Dmel: FBgn0043799, CG31381, [RH, Score=252, Expect=5e-78]} {Celegans: WBGene00001740, gro-1, tRNA isopentenyl transferase, [RH, Score=188, Expect=2e-54]} {Smed: dd_Smed_v6_11495_0_1, dd_Smed_v6_11495_0_1, [RH, Score=239, Expect=5e-74]} {RNA1509_51518} {RNA1310_17884} {RNA815_5793.1} |
18. | MligTC455_35022 | 166 | 3.45 | Mlig455_007549 | Neo: - Age: logFC(26M/2M)=1.108 |
NDUFA2 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_007549 {REF} {Length: 645} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain [PF05047.18, score=49.8]} {Human: ENSG00000131495, NDUFA2, NADH:ubiquinone oxidoreductase subunit A2, [RH, Score=97.1, Expect=2e-27]} {Mouse: ENSMUSG00000014294, Ndufa2, NADH:ubiquinone oxidoreductase subunit A2, [RH, Score=94.7, Expect=1e-26]} {Dmel: FBgn0040705, ND-B8, NADH dehydrogenase (ubiquinone) B8 subunit, [RH, Score=68.6, Expect=2e-16]} {Celegans: WBGene00013406, Y63D3A.7, [RH, Score=88.2, Expect=2e-24]} {Smed: dd_Smed_v6_1815_0_1, dd_Smed_v6_1815_0_1, [RH, Score=87.4, Expect=3e-24]} {RNA1509_16031} {RNA1310_56837.1} {RNA815_28457} |
19. | MligTC455_02672 | 334 | 6.95 | Mlig455_042012 | Neo: - Age: Up-Up-Down Region-enriched R2: 3.139/0.00043 Regeneration-upregulated TP: 4.172 Regeneration-enriched TP: 4.172 |
PPP1R3A | 0.95 | - | - | - | - | 0.950 | - | Mlig455_042012 {REF} {Length: 4507} {TRANSSPLICED} {Pfam: Carbohydrate/starch-binding module (family 21) [PF03370.15, score=87.8]; Starch/carbohydrate-binding module (family 53) [PF16760.7, score=44.2]; BTB/POZ domain [PF00651.33, score=27.4]} {Human: ENSG00000154415, PPP1R3A, protein phosphatase 1 regulatory subunit 3A, [RH, Score=110, Expect=5e-24]} {Mouse: ENSMUSG00000046794, Ppp1r3b, protein phosphatase 1, regulatory subunit 3B, [Score=89.4, Expect=5e-19]} {Dmel: FBgn0036862, Gbs-76A, Glycogen binding subunit 76A, [Score=103, Expect=2e-22]} {Celegans: WBGene00019211, H18N23.2, Protein phosphatase 1 regulatory subunit, [Score=85.5, Expect=1e-17]} {Smed: dd_Smed_v6_8791_0_1, dd_Smed_v6_8791_0_1, [RH, Score=122, Expect=2e-30]} {RNA1509_16470, RNA1509_22847} {RNA1310_2197, RNA1509_16470, RNA1509_22847} {RNA1509_16470, RNA1509_22847, RNA815_5976} |
20. | MligTC455_11689 | 80 | 1.67 | Mlig455_070711 | Neo: - Age: logFC(26M/2M)=-0.676 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_070711 {REF} {Length: 3973} {Pfam: CUB domain [PF00431.22, score=40.4]} {RNA1509_53207} {RNA1310_4616.1, RNA1509_53207} {RNA1509_53207, RNA815_5995} | |
21. | MligTC455_28253 | 2049 | 42.69 | Mlig455_026878 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.424/0.00004 |
DUSP8 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_026878 {REF} {Length: 3039} {TRANSSPLICED} {tRNA: Lys(CTT),pseudo, score=29.7} {Pfam: Dual specificity phosphatase, catalytic domain [PF00782.22, score=131.6]; Rhodanese-like domain [PF00581.22, score=24.6]; Protein-tyrosine phosphatase [PF00102.29, score=18.7]} {Human: ENSG00000278165, DUSP8, dual specificity phosphatase 8, [RH, Score=246, Expect=1e-73]; ENSG00000273793, DUSP8, dual specificity phosphatase 8, [RH, Score=246, Expect=1e-73]; ENSG00000184545, DUSP8, dual specificity phosphatase 8, [RH, Score=246, Expect=1e-73]; ENSG00000280962, DUSP16, dual specificity phosphatase 16, [RH, Score=242, Expect=4e-72]; ENSG00000111266, DUSP16, dual specificity phosphatase 16, [RH, Score=242, Expect=4e-72]} {Mouse: ENSMUSG00000037887, Dusp8, dual specificity phosphatase 8, [RH, Score=248, Expect=2e-74]; ENSMUSG00000030203, Dusp16, dual specificity phosphatase 16, [RH, Score=242, Expect=2e-72]} {Dmel: FBgn0036844, Mkp3, Mitogen-activated protein kinase phosphatase 3, [RH, Score=145, Expect=1e-37]} {Celegans: WBGene00006923, vhp-1, Tyrosine-protein phosphatase vhp-1, [RH, Score=207, Expect=1e-59]} {Smed: dd_Smed_v6_8066_0_1, dd_Smed_v6_8066_0_1, [Score=158, Expect=8e-42]} {RNA1509_51626} {RNA1310_8102.1, RNA1509_51626} {RNA1509_51626, RNA815_3235} |