TomoSeq data search

Data search

Results for MligTC455_41483

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_41483	50	1.05	Mlig455_006754	Neo: - Age: -		Mlig455_006754 {REF} {Length: 3493} {RNA1310_64559} {RNA815_57833}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_41483

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.083	1.255	1.00000	1.00000
RegionR2	2.315	1.255	0.99993	1.00000
RegionR3	-0.094	1.255	0.99999	1.00000
RegionR4	-1.966	1.255	0.99986	1.00000
RegionR5	-0.942	1.255	0.99989	1.00000
RegionR6	0.044	1.255	1.00000	1.00000
RegionR7	0.806	1.255	0.99996	1.00000
RegionR8	0.919	1.255	0.99996	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	3.103	1.255	0.99999	1.00000
RegenerationR2	5.635	1.255	0.00009	0.01169
RegenerationR3	6.31	1.255	0.00140	0.06141
RegenerationR4	6.167	1.255	0.00120	0.04000
RegenerationR5	6.538	1.255	0.00012	0.01492
RegenerationR6	5.64	1.255	0.00619	0.09564
RegenerationBL	6.001	1.255	0.00458	0.06198
RegenerationTP	7.537	1.255	0.00050	0.03174

Genes with expression patterns similar to MligTC455_41483

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_41483	50	1.05	Mlig455_006754	Neo: - Age: -		3	-	-	-	1.000	1.000	1.000	Mlig455_006754 {REF} {Length: 3493} {RNA1310_64559} {RNA815_57833}
2.	MligTC455_22257	24	0.49	Mlig455_002961	Neo: - Age: -		1.754	-	-	-	0.780	0.974	-	Mlig455_002961 {REF} {Length: 1429} {NoTransDecoderORF} {RNA1509_19236} {RNA1310_28041.2} {RNA815_50832.1}
3.	MligTC455_28128	70	1.46	Mlig455_069808	Neo: - Age: -		1.752	-	-	-	-	0.796	0.956	Mlig455_069808 {REF} {Length: 2180} {NoTransDecoderORF} {RNA1509_13222} {RNA1310_34828.2} {RNA815_11419.1}
4.	MligTC455_19231	149	3.11	Mlig455_064092	Neo: - Age: - Region-enriched R7: 4.202/0.00037 Region-enriched R6: 3.700/0.00828		1.724	-	-	-	-	0.953	0.771	Mlig455_064092 {REF} {Length: 1757} {RNA1509_35166} {RNA1310_79280} {RNA815_45488}
5.	MligTC455_47766	84	1.76	Mlig455_014161, Mlig455_014170	Neo: - Age: -	ASIC3	1	-	-	-	1.000	-	-	Mlig455_014161 {REF} {Length: 4188} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=211.0]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=78.2, Expect=1e-14]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=82.4, Expect=5e-16]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=84.7, Expect=9e-17]} {Smed: dd_Smed_v6_16346_0_1, dd_Smed_v6_16346_0_1, [Score=73.6, Expect=3e-13]} {RNA1509_40855} {RNA1310_23427} {RNA815_12118} Mlig455_014170 {REF} {Length: 3524} {RNA1509_40855} {RNA1310_23427} {RNA815_12118}
6.	MligTC455_51479	285	5.94	Mlig455_015075	Neo: - Age: -		0.982	-	-	-	-	0.982	-	Mlig455_015075 {REF} {Length: 2603} {NoTransDecoderORF} {RNA1509_22350, RNA1509_37697} {RNA1310_36377, RNA1509_22350, RNA1509_37697} {RNA1509_22350, RNA1509_37697, RNA815_27320}
7.	MligTC455_33069	146	3.04	Mlig455_011944	Neo: - Age: Down-Up-Down		0.977	-	-	-	-	0.977	-	Mlig455_011944 {REF} {Length: 1422} {TRANSSPLICED} {RNA1509_20571, RNA1509_24355, RNA1509_56123} {RNA1310_38731, RNA1509_24355, RNA1509_56123} {RNA1509_24355, RNA1509_56123, RNA815_19943}
8.	MligTC455_51480	270	5.62	Mlig455_027153	Neo: - Age: -		0.976	-	-	-	-	0.976	-	Mlig455_027153 {REF} {Length: 479} {NoTransDecoderORF} {RNA1509_37697} {RNA1310_36377} {RNA815_27320}
9.	MligTC455_35022	166	3.45	Mlig455_007549	Neo: - Age: logFC(26M/2M)=1.108	NDUFA2	0.974	-	-	-	-	0.974	-	Mlig455_007549 {REF} {Length: 645} {TRANSSPLICED} {Pfam: Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain [PF05047.18, score=49.8]} {Human: ENSG00000131495, NDUFA2, NADH:ubiquinone oxidoreductase subunit A2, [RH, Score=97.1, Expect=2e-27]} {Mouse: ENSMUSG00000014294, Ndufa2, NADH:ubiquinone oxidoreductase subunit A2, [RH, Score=94.7, Expect=1e-26]} {Dmel: FBgn0040705, ND-B8, NADH dehydrogenase (ubiquinone) B8 subunit, [RH, Score=68.6, Expect=2e-16]} {Celegans: WBGene00013406, Y63D3A.7, [RH, Score=88.2, Expect=2e-24]} {Smed: dd_Smed_v6_1815_0_1, dd_Smed_v6_1815_0_1, [RH, Score=87.4, Expect=3e-24]} {RNA1509_16031} {RNA1310_56837.1} {RNA815_28457}
10.	MligTC455_10289	10	0.21	Mlig455_012272	Neo: - Age: Down-Up-Up, logFC(26M/2M)=1.129		0.971	-	-	-	0.971	-	-	Mlig455_012272 {REF} {Length: 2644} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=23.6]} {RNA1310_76907} {RNA815_46853}
11.	MligTC455_33068	138	2.87	Mlig455_011936	Neo: - Age: -		0.969	-	-	-	-	0.969	-	Mlig455_011936 {REF} {Length: 1402} {TRANSSPLICED} {RNA1509_20571} {RNA1310_38731} {RNA815_19943}
12.	MligTC455_25021	137	2.86	Mlig455_008215	Neo: - Age: Down-Up-Up		0.968	-	-	-	-	0.968	-	Mlig455_008215 {REF} {Length: 725} {Pfam: Transglutaminase family [PF00868.22, score=45.1]} {Dmel: FBgn0031975, Tg, Transglutaminase, [Score=46.2, Expect=5e-07]} {RNA1509_27288} {RNA1310_46156} {RNA815_13515.1}
13.	MligTC455_28550	147	3.06	Mlig455_048750	Neo: - Age: logFC(26M/2M)=1.038 Region-enriched R5: 2.521/0.03072	NDRG1	0.966	-	-	-	-	0.966	-	Mlig455_048750 {REF} {Length: 2415} {TRANSSPLICED} {Pfam: Ndr family [PF03096.16, score=186.2]} {Human: ENSG00000104419, NDRG1, N-myc downstream regulated 1, [Score=125, Expect=9e-32]; ENSG00000101079, NDRG3, NDRG family member 3, [Score=122, Expect=1e-30]} {Mouse: ENSMUSG00000027634, Ndrg3, N-myc downstream regulated gene 3, [Score=119, Expect=1e-29]; ENSMUSG00000005125, Ndrg1, N-myc downstream regulated gene 1, [Score=118, Expect=3e-29]} {Dmel: FBgn0043070, MESK2, Misexpression suppressor of KSR 2, [Score=127, Expect=2e-32]} {Celegans: WBGene00013020, Y48G10A.3, [RH, Score=117, Expect=1e-29]} {Smed: dd_Smed_v6_1911_0_1, dd_Smed_v6_1911_0_1, [Score=226, Expect=2e-70]} {RNA1509_13688} {RNA1310_24392} {RNA815_9919}
14.	MligTC455_11681	9	0.19	Mlig455_022655	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_022655 {REF} {Length: 693} {NoTransDecoderORF} {RNA1310_74751.2}
15.	MligTC455_18935	141	2.93	Mlig455_012123, Mlig455_029004	Neo: - Age: logFC(26M/2M)=-1.032	IRF1	0.965	-	-	-	-	0.965	-	Mlig455_012123 {REF} {Length: 1962} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=61.2]} {Human: ENSG00000125347, IRF1, interferon regulatory factor 1, [Score=58.9, Expect=3e-09]} {Mouse: ENSMUSG00000018899, Irf1, interferon regulatory factor 1, [Score=58.5, Expect=4e-09]; ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [Score=55.8, Expect=3e-08]} {RNA1509_44213} {RNA1310_27978.1} {RNA815_17421} Mlig455_029004 {REF} {Length: 1330} {Pfam: Interferon regulatory factor transcription factor [PF00605.19, score=59.6]} {Human: ENSG00000125347, IRF1, interferon regulatory factor 1, [Score=57.4, Expect=4e-09]; ENSG00000168310, IRF2, interferon regulatory factor 2, [Score=55.1, Expect=3e-08]} {Mouse: ENSMUSG00000018899, Irf1, interferon regulatory factor 1, [Score=56.6, Expect=6e-09]; ENSMUSG00000031627, Irf2, interferon regulatory factor 2, [Score=54.7, Expect=2e-08]} {RNA1310_27978.1} {RNA815_17421}
16.	MligTC455_08055	15	0.32	Mlig455_001917	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_001917 {REF} {Length: 754} {NoTransDecoderORF} {RNA1509_12583} {RNA1310_111677}
17.	MligTC455_28871	42	0.88	Mlig455_014977, Mlig455_045105, Mlig455_070240	Neo: Irradiation Age: Up-Down-Down, logFC(26M/2M)=0.436	NYNRIN	0.962	-	-	-	-	0.962	-	Mlig455_014977 {REF} {Length: 5538} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=43.5, Expect=4e-07]} {RNA1509_43263} {RNA1310_12394.1} {RNA815_22479} Mlig455_045105 {REF} {Length: 712} {Pfam: Integrase core domain [PF00665.28, score=48.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=48.5, Expect=1e-05]} {Smed: dd_Smed_v6_3718_0_1, dd_Smed_v6_3718_0_1, [Score=66.2, Expect=3e-12]} {RNA1509_43263} {RNA1310_12394.2} {RNA815_26248.2} Mlig455_070240 {REF} {Length: 8589} {TRANSSPLICED} {Smed: dd_Smed_v6_73290_0_1, dd_Smed_v6_73290_0_1, [Score=43.5, Expect=4e-07]} {RNA1509_43263} {RNA1310_12394.1, RNA1509_43263} {RNA1509_43263, RNA815_166}
18.	MligTC455_02205	14	0.29	Mlig455_027460	Neo: - Age: -	WDR17	0.961	-	-	-	-	0.961	-	Mlig455_027460 {REF} {Length: 4333} {Pfam: WD domain, G-beta repeat [PF00400.34, score=104.7]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=57.5]} {Human: ENSG00000150627, WDR17, WD repeat domain 17, [Score=842, Expect=0.0]} {Mouse: ENSMUSG00000039375, Wdr17, WD repeat domain 17, [Score=858, Expect=0.0]} {Dmel: FBgn0263933, ebi, [Score=84.7, Expect=3e-16]} {Celegans: WBGene00004767, sel-10, F-box/WD repeat-containing protein sel-10, [Score=88.6, Expect=1e-17]} {Smed: dd_Smed_v6_2866_0_1, dd_Smed_v6_2866_0_1, [Score=80.9, Expect=3e-16]} {RNA1310_124405} {RNA815_31576}
19.	MligTC455_32143	37	0.78	Mlig455_006401	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.419	TRPM7	0.961	-	-	-	0.961	-	-	Mlig455_006401 {REF} {Length: 5446} {Human: ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=100, Expect=1e-20]} {Mouse: ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=99.4, Expect=2e-20]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=121, Expect=5e-28]} {RNA1509_29775} {RNA1310_1317} {RNA815_8567}
20.	MligTC455_52439	266	5.53	Mlig455_065368	Neo: - Age: logFC(26M/2M)=-0.267		0.961	-	-	-	-	0.961	-	Mlig455_065368 {REF} {Length: 2661} {TRANSSPLICED} {RNA1509_22620} {RNA1310_9393.1, RNA1509_22620} {RNA1509_22620, RNA815_16638}
21.	MligTC455_49710	69	1.45	Mlig455_064824	Neo: - Age: -		0.959	-	-	-	-	0.959	-	Mlig455_064824 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1509_51983} {RNA1310_69193} {RNA815_28501}
22.	MligTC455_27836	130	2.7	Mlig455_006287	Neo: - Age: -	ANKRD42	0.958	-	-	-	-	-	0.958	Mlig455_006287 {REF} {Length: 9672} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=112.7]; Ankyrin repeats (many copies) [PF13637.8, score=87.9]; Ankyrin repeats (many copies) [PF13857.8, score=60.1]; Ankyrin repeat [PF13606.8, score=44.5]; Ankyrin repeat [PF00023.32, score=36.6]} {Human: ENSG00000137494, ANKRD42, ankyrin repeat domain 42, [Score=58.2, Expect=6e-09]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=57.0, Expect=1e-08]} {Mouse: ENSMUSG00000041343, Ankrd42, ankyrin repeat domain 42, [Score=63.9, Expect=4e-11]} {Dmel: FBgn0263601, mib1, mind bomb 1, [Score=62.0, Expect=2e-10]} {Smed: dd_Smed_v6_13251_0_1, dd_Smed_v6_13251_0_1, [Score=57.8, Expect=2e-09]} {RNA1509_20493} {RNA1310_131.1} {RNA815_52.1}
23.	MligTC455_42296	21	0.44	Mlig455_053339	Neo: - Age: -	PIP5K1A	0.958	-	-	-	-	0.958	-	Mlig455_053339 {REF} {Length: 2073} {TRANSSPLICED} {Pfam: Phosphatidylinositol-4-phosphate 5-Kinase [PF01504.20, score=268.3]} {Human: ENSG00000143398, PIP5K1A, phosphatidylinositol-4-phosphate 5-kinase type 1 alpha, [RH, Score=417, Expect=9e-140]} {Mouse: ENSMUSG00000034902, Pip5k1c, phosphatidylinositol-4-phosphate 5-kinase, type 1 gamma, [RH, Score=409, Expect=5e-136]} {Dmel: FBgn0016984, sktl, skittles, [Score=435, Expect=2e-144]} {Celegans: WBGene00004087, ppk-1, PIP Kinase, [Score=409, Expect=1e-136]} {Smed: dd_Smed_v6_7632_0_3, dd_Smed_v6_7632_0_3, [Score=414, Expect=8e-140]} {RNA1509_26123} {RNA1310_25286.1} {RNA815_4999.1}
24.	MligTC455_15747	66	1.38	Mlig455_044205	Neo: - Age: Down-Up-Up		0.957	-	-	-	-	0.957	-	Mlig455_044205 {REF} {Length: 935} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_28325.2} {RNA815_29746}
25.	MligTC455_51081	100	2.09	Mlig455_029025	Neo: - Age: -	THAP2	0.956	-	-	-	-	0.956	-	Mlig455_029025 {REF} {Length: 3115} {Pfam: THAP domain [PF05485.14, score=58.0]} {Human: ENSG00000173451, THAP2, THAP domain containing 2, [Score=64.3, Expect=1e-11]} {Mouse: ENSMUSG00000020137, Thap2, THAP domain containing, apoptosis associated protein 2, [Score=65.1, Expect=3e-12]} {RNA1509_46373, RNA1509_47157} {RNA1310_33057, RNA1509_46373, RNA1509_47157} {RNA1509_46373, RNA1509_47157, RNA815_6917.1}
26.	MligTC455_23239	32	0.67	Mlig455_030867	Neo: - Age: -	PRKCB	0.954	-	-	-	-	0.954	-	Mlig455_030867 {REF} {Length: 3999} {Pfam: Protein kinase domain [PF00069.27, score=228.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=131.0]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=118.5]; C2 domain [PF00168.32, score=93.9]; Protein kinase C terminal domain [PF00433.26, score=35.3]; C1 domain [PF03107.18, score=22.2]; Kinase-like [PF14531.8, score=19.0]} {Human: ENSG00000166501, PRKCB, protein kinase C beta, [RH, Score=962, Expect=0.0]; ENSG00000154229, PRKCA, protein kinase C alpha, [RH, Score=952, Expect=0.0]} {Mouse: ENSMUSG00000052889, Prkcb, protein kinase C, beta, [RH, Score=963, Expect=0.0]; ENSMUSG00000050965, Prkca, protein kinase C, alpha, [RH, Score=952, Expect=0.0]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [RH, Score=941, Expect=0.0]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [RH, Score=940, Expect=0.0]} {Smed: dd_Smed_v6_4244_0_2, dd_Smed_v6_4244_0_2, [RH, Score=1049, Expect=0.0]} {RNA1509_51260} {RNA1310_9698, RNA1509_51260} {RNA1509_51260, RNA815_24870}
27.	MligTC455_24631	8516	177.42	Mlig455_021282	Neo: Int S/G2/M Age: logFC(26M/2M)=8.536		0.954	-	-	-	-	0.954	-	Mlig455_021282 {REF} {Length: 304} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_363} {RNA1310_113178.2} {RNA815_52026}
28.	MligTC455_10753	13	0.27	Mlig455_036562	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_036562 {REF} {Length: 1200}
29.	MligTC455_03227	266	5.54	Mlig455_035719	Neo: - Age: - Region-enriched R2: 2.342/0.02665		0.95	-	-	-	-	-	0.950	Mlig455_035719 {REF} {Length: 154} {NoTransDecoderORF} {RNA1310_97182} {RNA815_18537}