Data search


search
Exact
Search

Results for MligTC455_02491

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_02491 10 0.21 Mlig455_012484, Mlig455_063061

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.675

Mlig455_012484 {REF} {Length: 151} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_16853.1} {RNA815_5432}

Mlig455_063061 {REF} {Length: 3289} {RNA1509_10864} {RNA1310_16853.1} {RNA815_5432}

Cumulative graph for MligTC455_02491

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_02491

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_02491 10 0.21 Mlig455_012484, Mlig455_063061

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.675

2 - - - - 1.000 1.000

Mlig455_012484 {REF} {Length: 151} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_16853.1} {RNA815_5432}

Mlig455_063061 {REF} {Length: 3289} {RNA1509_10864} {RNA1310_16853.1} {RNA815_5432}
2. MligTC455_43105 56 1.16 Mlig455_007239

Neo: -

Age: -

SLC39A9 0.983 - - - - 0.983 - Mlig455_007239 {REF} {Length: 4657} {Pfam: ZIP Zinc transporter [PF02535.24, score=112.3]} {Human: ENSG00000029364, SLC39A9, solute carrier family 39 member 9, [Score=278, Expect=1e-91]} {Mouse: ENSMUSG00000048833, Slc39a9, solute carrier family 39 (zinc transporter), member 9, [Score=255, Expect=8e-83]} {Dmel: FBgn0039902, Zip102B, Zinc/iron regulated transporter-related protein 102B, [Score=216, Expect=9e-68]} {Celegans: WBGene00011329, zipt-9, Zrt (ZRT), Irt-(IRT-) like Protein Transporter, [RH, Score=240, Expect=3e-76]} {Smed: dd_Smed_v6_6946_0_1, dd_Smed_v6_6946_0_1, [RH, Score=293, Expect=2e-97]} {RNA1509_18192} {RNA1310_37072} {RNA815_20206}
3. MligTC455_11141 14 0.3 Mlig455_047597

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_047597 {REF} {Length: 667} {NoTransDecoderORF} {RNA1310_102103} {RNA815_39659}
4. MligTC455_11355 66 1.38 Mlig455_034322, Mlig455_034378, Mlig455_043871

Neo: -

Age: -

Region-enriched R3: 4.624/0.00008

SLC26A5 0.974 - - - - - 0.974

Mlig455_034322 {REF} {Length: 4380} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=343.1]; STAS domain [PF01740.23, score=98.2]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=458, Expect=5e-149]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=457, Expect=1e-148]} {Dmel: FBgn0036770, Prestin, [RH, Score=381, Expect=7e-120]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [Score=364, Expect=1e-113]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=483, Expect=3e-159]} {RNA1509_26126, RNA1509_51830} {RNA1310_8236, RNA1509_26126} {RNA1509_26126, RNA815_7137}

Mlig455_034378 {REF} {Length: 3890} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=343.1]; STAS domain [PF01740.23, score=98.2]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=457, Expect=1e-148]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=456, Expect=3e-148]} {Dmel: FBgn0036770, Prestin, [RH, Score=381, Expect=7e-120]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [Score=369, Expect=5e-115]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=481, Expect=2e-158]} {RNA1509_51830} {RNA1310_8236} {RNA815_7137}

Mlig455_043871 {REF} {Length: 4355} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=339.3]; STAS domain [PF01740.23, score=98.3]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=453, Expect=2e-147]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=451, Expect=1e-146]} {Dmel: FBgn0036770, Prestin, [RH, Score=375, Expect=7e-118]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [Score=360, Expect=6e-112]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=479, Expect=1e-157]} {RNA1509_51830} {RNA1310_8236, RNA1509_51830} {RNA1509_51830, RNA815_7137}
5. MligTC455_20231 57 1.19 Mlig455_053859

Neo: -

Age: Down-Up-Up

Regeneration-downregulated R4: -5.496

Regeneration-depleted R4: -5.496

0.974 - - - - 0.974 - Mlig455_053859 {REF} {Length: 4284} {RNA1509_19779} {RNA1310_3385} {RNA815_965}
6. MligTC455_17907 2 0.05 Mlig455_060899

Neo: -

Age: -

0.972 - - - - - 0.972 Mlig455_060899 {REF} {Length: 779} {RNA1310_47367}
7. MligTC455_06901 5 0.11 Mlig455_003607

Neo: -

Age: -

0.962 - - - - 0.962 - Mlig455_003607 {REF} {Length: 602} {NoTransDecoderORF} {tRNA: Trp(CCA), score=71.2}
8. MligTC455_07256 15 0.31 Mlig455_030099

Neo: -

Age: -

0.962 - - - - 0.962 - Mlig455_030099 {REF} {Length: 739} {NoTransDecoderORF} {RNA1509_58900} {RNA1310_3821} {RNA815_7300}
9. MligTC455_39013 53 1.1 Mlig455_030082

Neo: -

Age: Up-Down-Down

PLCB1 0.961 - - - - - 0.961 Mlig455_030082 {REF} {Length: 5740} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=199.2]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=124.4]; PH domain [PF17787.3, score=120.6]; Phosphoinositide-specific phospholipase C, efhand-like [PF09279.13, score=33.9]} {Human: ENSG00000182621, PLCB1, phospholipase C beta 1, [RH, Score=826, Expect=0.0]; ENSG00000149782, PLCB3, phospholipase C beta 3, [RH, Score=824, Expect=0.0]} {Mouse: ENSMUSG00000051177, Plcb1, phospholipase C, beta 1, [RH, Score=826, Expect=0.0]; ENSMUSG00000024960, Plcb3, phospholipase C, beta 3, [RH, Score=813, Expect=0.0]} {Dmel: FBgn0262738, norpA, no receptor potential A, [Score=670, Expect=0.0]} {Celegans: WBGene00001177, egl-8, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8, [Score=680, Expect=0.0]} {Smed: dd_Smed_v6_3221_0_1, dd_Smed_v6_3221_0_1, [Score=724, Expect=0.0]} {RNA1509_47106} {RNA1310_7555, RNA1509_47106} {RNA1509_47106, RNA815_2033}
10. MligTC455_29948 8 0.16 Mlig455_027187, Mlig455_033076

Neo: -

Age: Up-Down-Down

MAGEE1 0.959 - - - - 0.959 -

Mlig455_027187 {REF} {Length: 1046} {Pfam: MULE transposase domain [PF10551.11, score=56.3]} {Smed: dd_Smed_v6_40199_0_1, dd_Smed_v6_40199_0_1, [Score=61.6, Expect=6e-12]} {RNA1310_9278.2} {RNA815_63796}

Mlig455_033076 {REF} {Length: 4851} {Human: ENSG00000198934, MAGEE1, MAGE family member E1, [Score=49.3, Expect=1e-05]} {Celegans: WBGene00044201, H39E23.3, [Score=53.1, Expect=2e-07]} {RNA1509_32396} {RNA1310_22534} {RNA815_1171.1}
11. MligTC455_11766 201 4.18 Mlig455_048732

Neo: -

Age: -

Region-enriched R3: 3.689/0.00006

0.958 - - - - - 0.958 Mlig455_048732 {REF} {Length: 376} {NoTransDecoderORF} {RNA1310_75754} {RNA815_50709.2}
12. MligTC455_13304 32 0.68 Mlig455_071151

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.911/0.01970

0.958 - - - - - 0.958 Mlig455_071151 {REF} {Length: 3765} {Pfam: TatD related DNase [PF01026.23, score=22.4]} {RNA1509_28937} {RNA1310_4063.2} {RNA815_6984}
13. MligTC455_53486 21 0.44 Mlig455_053034

Neo: -

Age: -

0.957 - - - - - 0.957 Mlig455_053034 {REF} {Length: 1190} {RNA1509_45864} {RNA1310_3774} {RNA815_2602}
14. MligTC455_17702 7 0.14 Mlig455_013249

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_013249 {REF} {Length: 992} {NoTransDecoderORF} {RNA1509_5304} {RNA1310_15326} {RNA815_6348}
15. MligTC455_06685 13 0.27 Mlig455_009767

Neo: -

Age: -

0.953 - - - - 0.953 - Mlig455_009767 {REF} {Length: 342} {NoTransDecoderORF}
16. MligTC455_12043 20 0.42 Mlig455_001436

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_001436 {REF} {Length: 2400} {RNA1509_25022} {RNA1310_51198} {RNA815_4278}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA