M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_13304

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_13304 32 0.68 Mlig455_071151

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.911/0.01970

 Mlig455_071151 {REF} {Length: 3765} {Pfam: TatD related DNase [PF01026.23, score=22.4]} {RNA1509_28937} {RNA1310_4063.2} {RNA815_6984}

Cumulative graph for MligTC455_13304

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.657 1.212 0.99971 1.00000
RegionR2 2.075 1.212 0.99978 1.00000
RegionR3 4.911 1.212 0.00059 0.01970
RegionR4 -0.09 1.212 0.45153 0.78042
RegionR5 -1.494 1.212 0.99970 1.00000
RegionR6 -0.448 1.212 0.99976 1.00000
RegionR7 -0.116 1.212 0.99980 1.00000
RegionR8 -0.181 1.212 0.99980 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.721 1.212 0.99993 1.00000
RegenerationR2 2.474 1.212 0.11269 0.52355
RegenerationR3 2.141 1.212 0.13092 0.55435
RegenerationR4 3.209 1.212 0.09033 0.47006
RegenerationR5 3.647 1.212 0.02857 0.28527
RegenerationR6 3.902 1.212 0.07056 0.33225
RegenerationBL 0.483 1.212 1.00000 1.00000
RegenerationTP 4.191 1.212 0.15607 0.58382


Genes with expression patterns similar to MligTC455_13304

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_13304 32 0.68 Mlig455_071151

Neo: -

Age: Down-Up-Down

Region-enriched R3: 4.911/0.01970

 4 - 1.000 - 1.000 1.000 1.000 Mlig455_071151 {REF} {Length: 3765} {Pfam: TatD related DNase [PF01026.23, score=22.4]} {RNA1509_28937} {RNA1310_4063.2} {RNA815_6984}
2. MligTC455_13372 54 1.13 Mlig455_003666, Mlig455_003876

Neo: -

Age: Up-Up-Up, logFC(26M/2M)=1.830

Region-enriched R4: 5.705/0.00171

 2.569 - - - 0.954 0.796 0.819

Mlig455_003666 {REF} {Length: 2129} {RNA1310_43536} {RNA815_30577}

Mlig455_003876 {REF} {Length: 2738} {RNA1310_27600.1} {RNA815_30577}
3. MligTC455_53486 21 0.44 Mlig455_053034

Neo: -

Age: -

 1.951 - - - 0.987 - 0.964 Mlig455_053034 {REF} {Length: 1190} {RNA1509_45864} {RNA1310_3774} {RNA815_2602}
4. MligTC455_11766 201 4.18 Mlig455_048732

Neo: -

Age: -

Region-enriched R3: 3.689/0.00006

 1.794 - - - 0.818 - 0.976 Mlig455_048732 {REF} {Length: 376} {NoTransDecoderORF} {RNA1310_75754} {RNA815_50709.2}
5. MligTC455_24078 101 2.1 Mlig455_034284

Neo: -

Age: -

Region-enriched R7: 3.488/0.00547

 1.788 - - - 0.832 - 0.956 Mlig455_034284 {REF} {Length: 2673} {RNA1509_26571} {RNA1310_19226, RNA1509_26571} {RNA1509_26571, RNA815_5656.1}
6. MligTC455_17906 25 0.53 Mlig455_041446

Neo: -

Age: -

Region-enriched R4: 4.797/0.00142

 1.755 - - - 0.973 - 0.782 Mlig455_041446 {REF} {Length: 786} {RNA1310_47367}
7. MligTC455_29796 153 3.19 Mlig455_010669, Mlig455_010764

Neo: -

Age: -

Region-enriched R3: 5.387/0.00000

 1.694 - - - - 0.739 0.955

Mlig455_010669 {REF} {Length: 1453} {NoTransDecoderORF} {RNA1509_450} {RNA1310_96673} {RNA815_20805}

Mlig455_010764 {REF} {Length: 97} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_450} {RNA1310_43615} {RNA815_20805}
8. MligTC455_21941 57 1.2 Mlig455_005337, Mlig455_008287, Mlig455_042435, Mlig455_042486

Neo: -

Age: Down-Up-Down

 0.993 - - - 0.993 - -

Mlig455_005337 {REF} {Length: 1085} {RNA1310_43853} {RNA815_33228}

Mlig455_008287 {REF} {Length: 716} {Pfam: Phage integrase family [PF00589.24, score=27.0]} {RNA1310_43853} {RNA815_33228}

Mlig455_042435 {REF} {Length: 1075} {Pfam: Phage integrase family [PF00589.24, score=24.5]} {RNA1310_28668} {RNA815_33228}

Mlig455_042486 {REF} {Length: 1073} {Pfam: Phage integrase family [PF00589.24, score=24.5]} {RNA1509_29315} {RNA1310_28668} {RNA815_33228}
9. MligTC455_24402 66 1.37 Mlig455_026150

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.826

Region-enriched R7: 3.491/0.02638

 0.992 - - - 0.992 - - Mlig455_026150 {REF} {Length: 5055} {RNA1509_55157} {RNA1310_33181, RNA1509_55157} {RNA1509_55157, RNA815_16598}
10. MligTC455_11355 66 1.38 Mlig455_034322, Mlig455_034378, Mlig455_043871

Neo: -

Age: -

Region-enriched R3: 4.624/0.00008

 SLC26A5 0.987 - - - - - 0.987

Mlig455_034322 {REF} {Length: 4380} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=343.1]; STAS domain [PF01740.23, score=98.2]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=458, Expect=5e-149]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=457, Expect=1e-148]} {Dmel: FBgn0036770, Prestin, [RH, Score=381, Expect=7e-120]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [Score=364, Expect=1e-113]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=483, Expect=3e-159]} {RNA1509_26126, RNA1509_51830} {RNA1310_8236, RNA1509_26126} {RNA1509_26126, RNA815_7137}

Mlig455_034378 {REF} {Length: 3890} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=343.1]; STAS domain [PF01740.23, score=98.2]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=457, Expect=1e-148]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=456, Expect=3e-148]} {Dmel: FBgn0036770, Prestin, [RH, Score=381, Expect=7e-120]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [Score=369, Expect=5e-115]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=481, Expect=2e-158]} {RNA1509_51830} {RNA1310_8236} {RNA815_7137}

Mlig455_043871 {REF} {Length: 4355} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=339.3]; STAS domain [PF01740.23, score=98.3]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [Score=453, Expect=2e-147]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [Score=451, Expect=1e-146]} {Dmel: FBgn0036770, Prestin, [RH, Score=375, Expect=7e-118]} {Celegans: WBGene00010788, sulp-4, Anion transporter SULP-4; SULfate Permease family, [Score=360, Expect=6e-112]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=479, Expect=1e-157]} {RNA1509_51830} {RNA1310_8236, RNA1509_51830} {RNA1509_51830, RNA815_7137}
11. MligTC455_16071 229 4.77 Mlig455_047509

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.448

Region-enriched R4: 3.022/0.00929

 0.986 - - - 0.986 - - Mlig455_047509 {REF} {Length: 3810} {RNA1509_37500} {RNA1310_107557} {RNA815_11877}
12. MligTC455_20547 166 3.46 Mlig455_050591

Neo: -

Age: -

Region-specific R4: 5.933

Region-enriched R4: 3.512/0.00088

 NDUFS8 0.985 - - - 0.985 - - Mlig455_050591 {REF} {Length: 1826} {Pfam: 4Fe-4S binding domain [PF00037.29, score=49.7]; 4Fe-4S dicluster domain [PF12838.9, score=49.5]; 4Fe-4S dicluster domain [PF13187.8, score=33.0]; 4Fe-4S double cluster binding domain [PF13484.8, score=31.1]; 4Fe-4S dicluster domain [PF14697.8, score=29.6]; 4Fe-4S dicluster domain [PF13237.8, score=28.3]; 4Fe-4S binding domain [PF12837.9, score=27.8]; 4Fe-4S binding domain [PF12797.9, score=23.8]; 4Fe-4S binding domain [PF12800.9, score=23.5]; 4Fe-4S dicluster domain [PF13183.8, score=21.2]; 4Fe-4S dicluster domain [PF13534.8, score=19.1]} {Human: ENSG00000110717, NDUFS8, NADH:ubiquinone oxidoreductase core subunit S8, [Score=229, Expect=1e-73]} {Mouse: ENSMUSG00000059734, Ndufs8, NADH:ubiquinone oxidoreductase core subunit S8, [Score=223, Expect=5e-71]} {Dmel: FBgn0017567, ND-23, NADH dehydrogenase (ubiquinone) 23 kDa subunit, [Score=222, Expect=8e-71]} {Celegans: WBGene00020636, T20H4.5, Probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 8, mitochondrial, [Score=210, Expect=2e-66]} {Smed: dd_Smed_v6_849_0_1, dd_Smed_v6_849_0_1, [Score=221, Expect=7e-71]} {RNA1509_29291} {RNA1310_10356.2} {RNA815_7305}
13. MligTC455_06393 3 0.06 Mlig455_047097

Neo: -

Age: -

 0.984 - - - - - 0.984 Mlig455_047097 {REF} {Length: 77} {NoTransDecoderORF} {RNA1509_32505} {RNA1310_106228} {RNA815_10554.1}
14. MligTC455_07246 45 0.93 Mlig455_067474

Neo: -

Age: -

 SON 0.982 - - - 0.982 - - Mlig455_067474 {REF} {Length: 977} {Human: ENSG00000159140, SON, SON DNA binding protein, [Score=58.9, Expect=6e-10]} {Mouse: ENSMUSG00000022961, Son, Son DNA binding protein, [Score=59.3, Expect=3e-10]} {RNA1310_117140}
15. MligTC455_40205 100 2.08 Mlig455_005749

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.845

 0.981 - - - 0.981 - - Mlig455_005749 {REF} {Length: 2660} {RNA1509_20476, RNA1509_58796} {RNA1310_19483, RNA1509_20476, RNA1509_58796} {RNA1509_20476, RNA1509_58796, RNA815_17630}
16. MligTC455_17907 2 0.05 Mlig455_060899

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_060899 {REF} {Length: 779} {RNA1310_47367}
17. MligTC455_26528 13 0.26 Mlig455_040071

Neo: -

Age: -

 GRM3 0.98 - - - - - 0.980 Mlig455_040071 {REF} {Length: 2806} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=143.0]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=27.6]} {Human: ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [Score=217, Expect=1e-60]} {Mouse: ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [Score=219, Expect=2e-61]} {Dmel: FBgn0050361, mtt, mangetout, [Score=238, Expect=4e-69]} {Celegans: WBGene00021152, mgl-3, Metabotropic GLutamate receptor family, [Score=180, Expect=2e-49]} {Smed: dd_Smed_v6_10130_0_1, dd_Smed_v6_10130_0_1, [Score=253, Expect=9e-74]} {RNA1310_60723} {RNA815_44721}
18. MligTC455_21277 24 0.51 Mlig455_014481

Neo: Germline

Age: -

 0.974 - - - 0.974 - - Mlig455_014481 {REF} {Length: 814} {RNA1509_39496, RNA1509_51849} {RNA1310_37048, RNA1509_39496, RNA1509_51849} {RNA1509_39496, RNA1509_51849, RNA815_26226.2}
19. MligTC455_39013 53 1.1 Mlig455_030082

Neo: -

Age: Up-Down-Down

 PLCB1 0.972 - - - - - 0.972 Mlig455_030082 {REF} {Length: 5740} {Pfam: Phosphatidylinositol-specific phospholipase C, X domain [PF00388.21, score=199.2]; Phosphatidylinositol-specific phospholipase C, Y domain [PF00387.21, score=124.4]; PH domain [PF17787.3, score=120.6]; Phosphoinositide-specific phospholipase C, efhand-like [PF09279.13, score=33.9]} {Human: ENSG00000182621, PLCB1, phospholipase C beta 1, [RH, Score=826, Expect=0.0]; ENSG00000149782, PLCB3, phospholipase C beta 3, [RH, Score=824, Expect=0.0]} {Mouse: ENSMUSG00000051177, Plcb1, phospholipase C, beta 1, [RH, Score=826, Expect=0.0]; ENSMUSG00000024960, Plcb3, phospholipase C, beta 3, [RH, Score=813, Expect=0.0]} {Dmel: FBgn0262738, norpA, no receptor potential A, [Score=670, Expect=0.0]} {Celegans: WBGene00001177, egl-8, 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta egl-8, [Score=680, Expect=0.0]} {Smed: dd_Smed_v6_3221_0_1, dd_Smed_v6_3221_0_1, [Score=724, Expect=0.0]} {RNA1509_47106} {RNA1310_7555, RNA1509_47106} {RNA1509_47106, RNA815_2033}
20. MligTC455_42203 119 2.48 Mlig455_068705

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.753

Region-specific R4: 4.757

Region-enriched R4: 2.467/0.01764

 0.971 - - - 0.971 - - Mlig455_068705 {REF} {Length: 1447} {RNA1509_44705} {RNA1310_18370} {RNA815_5248}
21. MligTC455_11532 401 8.35 Mlig455_006757

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.509

Region-enriched R4: 3.060/0.00014

 PRKAR2A 0.968 - - - 0.968 - - Mlig455_006757 {REF} {Length: 1487} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=118.5]} {Human: ENSG00000114302, PRKAR2A, protein kinase cAMP-dependent type II regulatory subunit alpha, [Score=134, Expect=3e-35]} {Mouse: ENSMUSG00000032601, Prkar2a, protein kinase, cAMP dependent regulatory, type II alpha, [Score=135, Expect=1e-35]} {Dmel: FBgn0022382, Pka-R2, Protein kinase, cAMP-dependent, regulatory subunit type 2, [Score=144, Expect=1e-39]} {Celegans: WBGene00002190, kin-2, cAMP-dependent protein kinase regulatory subunit, [Score=101, Expect=4e-24]} {Smed: dd_Smed_v6_1362_0_1, dd_Smed_v6_1362_0_1, [Score=139, Expect=1e-37]} {RNA1509_10361, RNA1509_15801, RNA1509_32999} {RNA1310_20124, RNA1509_10361, RNA1509_15801, RNA1509_32999} {RNA1509_10361, RNA1509_15801, RNA1509_32999, RNA815_9787.1}
22. MligTC455_12191 94 1.96 Mlig455_012125

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.545

Region-specific R4: 5.976

Region-enriched R4: 4.701/0.00002

 0.968 - - - 0.968 - - Mlig455_012125 {REF} {Length: 1537} {Pfam: Ion channel [PF07885.18, score=38.7]} {RNA1509_49272} {RNA1310_22746} {RNA815_12762}
23. MligTC455_11423 415 8.65 Mlig455_005060

Neo: -

Age: Up-Down-Up

Region-specific R4: 6.406

Region-enriched R4: 4.720/0.00014

 0.967 - - - 0.967 - - Mlig455_005060 {REF} {Length: 1169} {Pfam: Thioredoxin [PF00085.22, score=45.3]} {RNA1509_26647} {RNA1310_42837} {RNA815_27656.1}
24. MligTC455_22555 16 0.34 Mlig455_014043

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_014043 {REF} {Length: 1521} {RNA1509_57689} {RNA1310_98725} {RNA815_30060}
25. MligTC455_32666 93 1.94 Mlig455_016944

Neo: -

Age: Up-Down-Down

 0.964 - - - 0.964 - - Mlig455_016944 {REF} {Length: 9083} {Pfam: REJ domain [PF02010.17, score=60.8]} {RNA1509_21224} {RNA1310_402.1} {RNA815_93.1}
26. MligTC455_09732 364 7.58 Mlig455_064481

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.011

Region-enriched R4: 3.916/0.00020

 0.962 - - - 0.962 - - Mlig455_064481 {REF} {Length: 854} {RNA1509_22397} {RNA1310_8664} {RNA815_59449}
27. MligTC455_11779 247 5.15 Mlig455_015830

Neo: Germline

Age: -

 HSBP1 0.961 - - - 0.961 - - Mlig455_015830 {REF} {Length: 5894} {Pfam: Heat shock factor binding protein 1 [PF06825.14, score=44.7]} {Human: ENSG00000230989, HSBP1, heat shock factor binding protein 1, [Score=42.7, Expect=1e-05]} {Celegans: WBGene00002002, hsb-1, Heat Shock factor Binding protein, [Score=44.3, Expect=1e-06]} {RNA1509_2515} {RNA1310_28603.1} {RNA815_20600.2}
28. MligTC455_40064 79 1.64 Mlig455_002594

Neo: Neoblast

Age: logFC(26M/2M)=-0.725

Region-enriched R4: 2.735/0.03778

 ZFP36L2 0.961 - - - 0.961 - - Mlig455_002594 {REF} {Length: 1570} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=45.2]; Zinc finger domain [PF18345.3, score=34.4]; RNA-binding, Nab2-type zinc finger [PF14608.8, score=19.8]; CCCH-type zinc finger [PF18044.3, score=18.5]} {Human: ENSG00000152518, ZFP36L2, ZFP36 ring finger protein like 2, [RH, Score=76.6, Expect=4e-17]} {Mouse: ENSMUSG00000045817, Zfp36l2, zinc finger protein 36, C3H type-like 2, [Score=77.0, Expect=2e-17]; ENSMUSG00000021127, Zfp36l1, zinc finger protein 36, C3H type-like 1, [Score=77.0, Expect=1e-17]; ENSMUSG00000059334, Zfp36l3, zinc finger protein 36, C3H type-like 3, [Score=75.5, Expect=9e-17]} {Dmel: FBgn0011837, Tis11, Tis11 zinc finger protein, [Score=73.6, Expect=2e-16]} {Celegans: WBGene00009532, ccch-1, CCCH-type zinc finger putative transcription factor, [Score=70.1, Expect=3e-15]} {RNA1310_36065} {RNA815_47496}
29. MligTC455_05809 23 0.48 Mlig455_017165, Mlig455_048115

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.378/0.02273

 0.96 - - - 0.960 - -

Mlig455_017165 {REF} {Length: 910} {RNA1509_46071} {RNA1310_122976} {RNA815_41352}

Mlig455_048115 {REF} {Length: 991} {RNA1509_13122} {RNA1310_122976} {RNA815_39088}
30. MligTC455_11464 435 9.07 Mlig455_059139, Mlig455_065550

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.032

Region-enriched R4: 4.539/0.00000

 0.96 - - - 0.960 - -

Mlig455_059139 {REF} {Length: 1577} {RNA1509_21489} {RNA1310_20640} {RNA815_20184}

Mlig455_065550 {REF} {Length: 2048} {RNA1509_18619} {RNA1310_20640} {RNA815_20184}
31. MligTC455_42201 693 14.44 Mlig455_026451

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.344

Region-enriched R4: 2.801/0.00000

 0.96 - - - 0.960 - - Mlig455_026451 {REF} {Length: 1730} {RNA1509_21547, RNA1509_37532} {RNA1310_18370, RNA1509_21547} {RNA1509_21547, RNA815_5248}
32. MligTC455_32073 43 0.9 Mlig455_043621

Neo: Irradiation

Age: -

Region-enriched R4: 3.888/0.00237

 0.959 - - - 0.959 - - Mlig455_043621 {REF} {Length: 2838} {RNA1509_45511} {RNA1310_28603.1} {RNA815_29511.1}
33. MligTC455_42688 100 2.08 Mlig455_024732

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.061

Region-enriched R4: 2.622/0.03055

 0.959 - - - 0.959 - - Mlig455_024732 {REF} {Length: 3614} {RNA1509_26684} {RNA1310_5871.1, RNA1509_26684} {RNA1509_26684, RNA815_6931}
34. MligTC455_02491 10 0.21 Mlig455_012484, Mlig455_063061

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.675

 0.958 - - - - - 0.958

Mlig455_012484 {REF} {Length: 151} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_16853.1} {RNA815_5432}

Mlig455_063061 {REF} {Length: 3289} {RNA1509_10864} {RNA1310_16853.1} {RNA815_5432}
35. MligTC455_26707 904 18.84 Mlig455_000677

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.993

Region-enriched R4: 3.407/0.00000

Regeneration-depleted BL: -6.897
Regeneration-depleted R4: -2.863

 0.958 - - - 0.958 - - Mlig455_000677 {REF} {Length: 1852} {RNA1509_40106, RNA1509_6125, RNA1509_6558} {RNA1310_19758.1, RNA1509_40106, RNA1509_6125, RNA1509_6558} {RNA1509_40106, RNA1509_6125, RNA1509_6558, RNA815_7336}
36. MligTC455_08190 7 0.15 Mlig455_061430

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_061430 {REF} {Length: 878} {NoTransDecoderORF} {RNA1509_40626} {RNA1310_120160} {RNA815_23907.1}
37. MligTC455_27753 29 0.6 Mlig455_031842, Mlig455_068301

Neo: -

Age: Up-Down-Down

 0.956 - - - 0.956 - -

Mlig455_031842 {REF} {Length: 11944} {Pfam: WSC domain [PF01822.21, score=142.9]; Sushi repeat (SCR repeat) [PF00084.22, score=86.0]; Lectin C-type domain [PF00059.23, score=63.6]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=39.0]} {RNA1310_49657} {RNA815_14687.1}

Mlig455_068301 {REF} {Length: 11182} {Pfam: WSC domain [PF01822.21, score=146.3]; Sushi repeat (SCR repeat) [PF00084.22, score=84.3]; Lectin C-type domain [PF00059.23, score=46.4]; UL45 protein, carbohydrate-binding C-type lectin-like [PF05473.14, score=32.4]} {RNA1310_49657} {RNA815_48518}
38. MligTC455_34000 7 0.15 Mlig455_065873

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.595

 0.956 - - - - - 0.956 Mlig455_065873 {REF} {Length: 4538} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=234.9]; Ankyrin repeats (many copies) [PF13637.8, score=196.7]; Ankyrin repeats (many copies) [PF13857.8, score=102.7]; Ankyrin repeat [PF13606.8, score=88.4]; Family of unknown function (DUF6189) [PF19688.1, score=70.7]; Phage protein GP46 [PF07409.14, score=58.0]; 3,4-dihydroxy-2-butanone 4-phosphate synthase [PF00926.21, score=53.5]; Ankyrin repeat [PF00023.32, score=35.4]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=63.2, Expect=9e-10]} {Smed: dd_Smed_v6_14207_0_1, dd_Smed_v6_14207_0_1, [Score=51.6, Expect=3e-06]} {RNA1509_39348, RNA1509_57845} {RNA1310_21309.1, RNA1509_57845} {RNA1509_57845, RNA815_2397.1}
39. MligTC455_49744 66 1.37 Mlig455_063359

Neo: -

Age: Up-Down-Up

Region-enriched R3: 4.089/0.01103

 BOK 0.956 - - - - - 0.956 Mlig455_063359 {REF} {Length: 1339} {TRANSSPLICED} {Pfam: Apoptosis regulator proteins, Bcl-2 family [PF00452.21, score=76.8]} {Human: ENSG00000176720, BOK, BOK, BCL2 family apoptosis regulator, [RH, Score=111, Expect=1e-28]} {Mouse: ENSMUSG00000026278, Bok, BCL2-related ovarian killer, [Score=109, Expect=6e-28]} {Dmel: FBgn0029131, Debcl, Death executioner Bcl-2, [RH, Score=119, Expect=7e-31]} {RNA1310_34373} {RNA815_46602}
40. MligTC455_12394 26 0.53 Mlig455_022854, Mlig455_044315

Neo: Irradiation

Age: -

 0.954 - - - - - 0.954

Mlig455_022854 {REF} {Length: 1154} {NoTransDecoderORF} {RNA1509_59624} {RNA1310_43227} {RNA815_56310}

Mlig455_044315 {REF} {Length: 183} {NoTransDecoderORF} {RNA1310_43227}
41. MligTC455_45868 56 1.16 Mlig455_012764, Mlig455_021163, Mlig455_057862

Neo: Int S/G2/M

Age: -

 0.952 - - - 0.952 - -

Mlig455_012764 {REF} {Length: 2288} {Pfam: F5/8 type C domain [PF00754.27, score=29.4]} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}

Mlig455_021163 {REF} {Length: 2502} {Pfam: F5/8 type C domain [PF00754.27, score=19.7]} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}

Mlig455_057862 {REF} {Length: 4610} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}
42. MligTC455_11491 369 7.69 Mlig455_043445

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.704

Region-enriched R4: 4.172/0.00000
Region-enriched R7: 3.515/0.00714

 0.951 - - - 0.951 - - Mlig455_043445 {REF} {Length: 1525} {RNA1509_2462} {RNA1310_26364, RNA1509_2462} {RNA1509_2462, RNA815_11994}
43. MligTC455_12167 19 0.39 Mlig455_015050

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_015050 {REF} {Length: 448} {TRANSSPLICED}
44. MligTC455_24401 64 1.34 Mlig455_026103

Neo: -

Age: -

 0.951 - - - 0.951 - - Mlig455_026103 {REF} {Length: 5270} {RNA1509_55157} {RNA1310_33181} {RNA815_16598}
45. MligTC455_46285 568 11.84 Mlig455_063390

Neo: -

Age: logFC(26M/2M)=0.488

Region-enriched R2: 4.933/0.00026
Region-enriched R3: 3.321/0.00307

 0.951 - - - - - 0.951 Mlig455_063390 {REF} {Length: 871} {RNA1509_48573} {RNA1310_59611, RNA1509_48573} {RNA1509_48573, RNA815_35731}
46. MligTC455_06902 405 8.44 Mlig455_007354

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 6.290

Region-enriched R4: 3.899/0.00000

 0.95 - - - 0.950 - - Mlig455_007354 {REF} {Length: 902} {RNA1509_38064} {RNA1310_1210} {RNA815_18995.1}
47. MligTC455_15167 218 4.54 Mlig455_064679

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.402

Region-enriched R4: 2.457/0.02628

 SRR 0.95 - - - 0.950 - - Mlig455_064679 {REF} {Length: 1532} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=208.3]} {Human: ENSG00000167720, SRR, serine racemase, [Score=167, Expect=4e-48]} {Mouse: ENSMUSG00000001323, Srr, serine racemase, [Score=144, Expect=2e-39]} {Dmel: FBgn0037684, CG8129, [Score=102, Expect=8e-24]} {Celegans: WBGene00011353, T01H8.2, [Score=201, Expect=7e-62]} {Smed: dd_Smed_v6_13906_1_1, dd_Smed_v6_13906_1_1, [Score=243, Expect=2e-78]} {RNA1509_21384} {RNA1310_21410} {RNA815_8998}
48. MligTC455_24197 48 1 Mlig455_062645

Neo: -

Age: -

 KCNH7 0.95 - - - - - 0.950 Mlig455_062645 {REF} {Length: 4615} {Pfam: Ion transport protein [PF00520.33, score=125.5]; Cyclic nucleotide-binding domain [PF00027.31, score=51.0]; Ion channel [PF07885.18, score=45.8]} {Human: ENSG00000184611, KCNH7, potassium voltage-gated channel subfamily H member 7, [RH, Score=841, Expect=0.0]; ENSG00000173826, KCNH6, potassium voltage-gated channel subfamily H member 6, [RH, Score=818, Expect=0.0]; ENSG00000055118, KCNH2, potassium voltage-gated channel subfamily H member 2, [RH, Score=805, Expect=0.0]} {Mouse: ENSMUSG00000059742, Kcnh7, potassium voltage-gated channel, subfamily H (eag-related), member 7, [RH, Score=840, Expect=0.0]; ENSMUSG00000001901, Kcnh6, potassium voltage-gated channel, subfamily H (eag-related), member 6, [RH, Score=816, Expect=0.0]; ENSMUSG00000038319, Kcnh2, potassium voltage-gated channel, subfamily H (eag-related), member 2, [RH, Score=805, Expect=0.0]} {Dmel: FBgn0003353, sei, seizure, [RH, Score=780, Expect=0.0]} {Celegans: WBGene00006830, unc-103, Potassium voltage-gated channel unc-103, [RH, Score=764, Expect=0.0]} {Smed: dd_Smed_v6_12621_0_1, dd_Smed_v6_12621_0_1, [RH, Score=841, Expect=0.0]} {RNA1509_16542} {RNA1310_43827} {RNA815_26448}
49. MligTC455_53980 13 0.27 Mlig455_060865

Neo: -

Age: -

 GABBR2 0.95 - - - - - 0.950 Mlig455_060865 {REF} {Length: 3682} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=154.2]; Receptor family ligand binding region [PF01094.30, score=132.9]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=298, Expect=1e-88]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=297, Expect=2e-88]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=280, Expect=7e-81]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=252, Expect=6e-73]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=137, Expect=2e-36]} {RNA1310_54842} {RNA815_42601}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA