Data search
Results for MligTC455_02688
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_02688 | 477 | 9.93 | Mlig455_021762 | Neo: - Age: - |
Mlig455_021762 {REF} {Length: 998} {NoTransDecoderORF} {RNA1509_7515} {RNA1310_2732} {RNA815_7751} |
Cumulative graph for MligTC455_02688
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.329 | 3.63 | 0.79647 | 1.00000 | |
| RegionR2 | 0.972 | 3.63 | 0.03781 | 0.22531 | |
| RegionR3 | -0.055 | 3.63 | 0.89343 | 1.00000 | |
| RegionR4 | 0.878 | 3.63 | 0.04604 | 0.18245 | |
| RegionR5 | 0.211 | 3.63 | 0.55044 | 0.91199 | |
| RegionR6 | 0.562 | 3.63 | 0.15355 | 0.69911 | |
| RegionR7 | -1.397 | 3.63 | 0.04377 | 0.40207 | |
| RegionR8 | -0.842 | 3.63 | 0.27459 | 0.89826 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.031 | 3.63 | 0.51486 | 1.00000 | |
| RegenerationR2 | -0.554 | 3.63 | 0.11514 | 0.52777 | |
| RegenerationR3 | 0.521 | 3.63 | 0.22155 | 0.65686 | |
| RegenerationR4 | -0.364 | 3.63 | 0.38501 | 0.80437 | |
| RegenerationR5 | 0.26 | 3.63 | 0.48807 | 0.85133 | |
| RegenerationR6 | -0.114 | 3.63 | 0.79155 | 0.97345 | |
| RegenerationBL | 0.227 | 3.63 | 0.74574 | 1.00000 | |
| RegenerationTP | 1.892 | 3.63 | 0.00254 | 0.08189 |
Genes with expression patterns similar to MligTC455_02688
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_02688 | 477 | 9.93 | Mlig455_021762 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_021762 {REF} {Length: 998} {NoTransDecoderORF} {RNA1509_7515} {RNA1310_2732} {RNA815_7751} | |
| 2. | MligTC455_02689 | 499 | 10.39 | Mlig455_021837 | Neo: - Age: Down-Up-Down |
PPP1R2 | 5.954 | 0.998 | 0.981 | 0.991 | 0.997 | 0.998 | 0.989 | Mlig455_021837 {REF} {Length: 1643} {TRANSSPLICED} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=109.1]} {Human: ENSG00000184203, PPP1R2, protein phosphatase 1 regulatory inhibitor subunit 2, [Score=87.8, Expect=7e-21]} {Mouse: ENSMUSG00000047714, Ppp1r2, protein phosphatase 1, regulatory inhibitor subunit 2, [Score=86.3, Expect=2e-20]} {Dmel: FBgn0032632, CG6380, [RH, Score=72.0, Expect=9e-15]} {Celegans: WBGene00021312, szy-2, Suppressor of ZYg-1, [Score=85.9, Expect=9e-21]} {Smed: dd_Smed_v6_5135_0_1, dd_Smed_v6_5135_0_1, [RH, Score=77.8, Expect=5e-18]} {RNA1509_7515} {RNA1310_2732, RNA1509_7515} {RNA1509_7515, RNA815_7751} |
| 3. | MligTC455_36529 | 861 | 17.95 | Mlig455_058601 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.433 |
PMPCB | 0.98 | - | - | - | - | 0.980 | - | Mlig455_058601 {REF} {Length: 4202} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=174.8]; Peptidase M16 inactive domain [PF05193.23, score=108.1]} {Human: ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [RH, Score=504, Expect=2e-176]} {Mouse: ENSMUSG00000029017, Pmpcb, peptidase (mitochondrial processing) beta, [RH, Score=495, Expect=5e-173]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [RH, Score=494, Expect=5e-173]} {Celegans: WBGene00013880, mppb-1, Mitochondrial Processing Peptidase Beta, [RH, Score=379, Expect=6e-128]} {Smed: dd_Smed_v6_7914_0_1, dd_Smed_v6_7914_0_1, [RH, Score=427, Expect=5e-147]} {RNA1509_28355} {RNA1310_8781.1} {RNA815_3008.1} |
| 4. | MligTC455_16346 | 604 | 12.59 | Mlig455_024519 | Neo: Irradiation Age: - Region-specific R4: 2.395 Region-enriched R4: 1.498/0.01610 |
SH3KBP1 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_024519 {REF} {Length: 2788} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=110.1]; Variant SH3 domain [PF07653.19, score=84.8]; SH3 domain [PF00018.30, score=84.0]} {Human: ENSG00000147010, SH3KBP1, SH3 domain containing kinase binding protein 1, [Score=94.4, Expect=3e-20]} {Mouse: ENSMUSG00000040990, Sh3kbp1, SH3-domain kinase binding protein 1, [Score=92.4, Expect=9e-20]} {Dmel: FBgn0027598, cindr, CIN85 and CD2AP related, [RH, Score=77.0, Expect=7e-15]} {Celegans: WBGene00021549, Y44E3A.4, [Score=70.5, Expect=7e-13]} {Smed: dd_Smed_v6_1522_0_1, dd_Smed_v6_1522_0_1, [RH, Score=140, Expect=9e-37]} {RNA1509_44142} {RNA1310_6551} {RNA815_17932} |
| 5. | MligTC455_04854 | 57 | 1.18 | Mlig455_032030 | Neo: - Age: - Region-enriched R2: 5.099/0.03475 |
0.959 | 0.959 | - | - | - | - | - | Mlig455_032030 {REF} {Length: 1388} {RNA1310_84273} | |
| 6. | MligTC455_12642 | 482 | 10.03 | Mlig455_039313 | Neo: - Age: - |
MAOA | 0.959 | - | - | - | - | 0.959 | - | Mlig455_039313 {REF} {Length: 2035} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=81.6]} {Human: ENSG00000189221, MAOA, monoamine oxidase A, [Score=99.4, Expect=2e-23]; ENSG00000069535, MAOB, monoamine oxidase B, [Score=95.1, Expect=1e-21]} {Mouse: ENSMUSG00000025037, Maoa, monoamine oxidase A, [Score=95.9, Expect=6e-22]; ENSMUSG00000040147, Maob, monoamine oxidase B, [Score=95.5, Expect=8e-22]} {Smed: dd_Smed_v6_7098_0_1, dd_Smed_v6_7098_0_1, [Score=145, Expect=1e-41]} {RNA1509_42140} {RNA1310_19101} {RNA815_8501} |
| 7. | MligTC455_19663 | 367 | 7.65 | Mlig455_007764, Mlig455_056593 | Neo: - Age: - Region-enriched R7: 3.065/0.00870 |
0.959 | 0.959 | - | - | - | - | - | Mlig455_007764 {REF} {Length: 1520} {Pfam: Lectin C-type domain [PF00059.23, score=69.0]} {Mouse: ENSMUSG00000014542, Clec4f, C-type lectin domain family 4, member f, [Score=54.3, Expect=3e-08]} {Dmel: FBgn0035199, tfc, triforce, [RH, Score=64.7, Expect=6e-12]} {Celegans: WBGene00022858, ZK1193.2, [Score=57.4, Expect=2e-09]} {RNA1310_27721} {RNA815_13332} Mlig455_056593 {REF} {Length: 1499} {Pfam: Lectin C-type domain [PF00059.23, score=69.0]} {Mouse: ENSMUSG00000014542, Clec4f, C-type lectin domain family 4, member f, [Score=54.3, Expect=3e-08]} {Dmel: FBgn0035199, tfc, triforce, [RH, Score=64.7, Expect=6e-12]} {Celegans: WBGene00022858, ZK1193.2, [Score=57.4, Expect=2e-09]} {RNA1310_27721} {RNA815_13332} |
|
| 8. | MligTC455_36931 | 46 | 0.96 | Mlig455_036065 | Neo: - Age: - Regeneration-enriched R4: 8.939 |
0.956 | - | - | - | - | 0.956 | - | Mlig455_036065 {REF} {Length: 2830} {RNA1509_4722} {RNA1310_655.1} {RNA815_335.1} | |
| 9. | MligTC455_52827 | 213 | 4.44 | Mlig455_026116, Mlig455_026163 | Neo: - Age: - |
TTLL11 | 0.956 | - | - | - | - | 0.956 | - | Mlig455_026116 {REF} {Length: 3021} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=172.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=19.6]; YheC/D like ATP-grasp [PF14398.8, score=18.1]} {Human: ENSG00000175764, TTLL11, tubulin tyrosine ligase like 11, [RH, Score=364, Expect=4e-114]} {Mouse: ENSMUSG00000026885, Ttll11, tubulin tyrosine ligase-like family, member 11, [RH, Score=374, Expect=6e-119]} {Dmel: FBgn0039501, CG5987, [Score=188, Expect=3e-50]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=253, Expect=1e-74]} {Smed: dd_Smed_v6_13822_0_1, dd_Smed_v6_13822_0_1, [Score=420, Expect=2e-133]} {RNA1509_30534} {RNA1310_2777.1, RNA1509_30534} {RNA1509_30534, RNA815_1815.1} Mlig455_026163 {REF} {Length: 3086} {TRANSSPLICED} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=172.1]} {Human: ENSG00000175764, TTLL11, tubulin tyrosine ligase like 11, [RH, Score=360, Expect=2e-112]} {Mouse: ENSMUSG00000026885, Ttll11, tubulin tyrosine ligase-like family, member 11, [RH, Score=367, Expect=2e-116]} {Dmel: FBgn0034459, CG16716, [Score=184, Expect=2e-48]} {Celegans: WBGene00019230, ttll-11, Tubulin Tyrosine Ligase Like, [Score=250, Expect=2e-73]} {Smed: dd_Smed_v6_13822_0_1, dd_Smed_v6_13822_0_1, [Score=418, Expect=9e-133]} {RNA1509_30534} {RNA1310_2777.2} {RNA815_1815.1} |
| 10. | MligTC455_16079 | 136 | 2.84 | Mlig455_042498 | Neo: - Age: logFC(26M/2M)=0.797 |
0.955 | - | - | - | - | 0.955 | - | Mlig455_042498 {REF} {Length: 2366} {RNA1509_55486} {RNA1310_26714.2, RNA1509_55486} {RNA1509_55486, RNA815_22393} | |
| 11. | MligTC455_36530 | 135 | 2.81 | Mlig455_058661, Mlig455_058677 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.809 Region-enriched R7: 3.312/0.01717 |
PMPCB | 0.955 | - | - | - | - | 0.955 | - | Mlig455_058661 {REF} {Length: 2620} {TRANSSPLICED} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=174.8]; Peptidase M16 inactive domain [PF05193.23, score=108.1]} {Human: ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [RH, Score=504, Expect=2e-176]} {Mouse: ENSMUSG00000029017, Pmpcb, peptidase (mitochondrial processing) beta, [RH, Score=495, Expect=5e-173]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [RH, Score=494, Expect=5e-173]} {Celegans: WBGene00013880, mppb-1, Mitochondrial Processing Peptidase Beta, [RH, Score=379, Expect=6e-128]} {Smed: dd_Smed_v6_7914_0_1, dd_Smed_v6_7914_0_1, [RH, Score=427, Expect=5e-147]} {RNA1509_18919} {RNA1310_8781.1} {RNA815_3008.1} Mlig455_058677 {REF} {Length: 2642} {TRANSSPLICED} {Pfam: Insulinase (Peptidase family M16) [PF00675.22, score=174.8]; Peptidase M16 inactive domain [PF05193.23, score=108.1]} {Human: ENSG00000105819, PMPCB, peptidase, mitochondrial processing beta subunit, [RH, Score=504, Expect=2e-176]} {Mouse: ENSMUSG00000029017, Pmpcb, peptidase (mitochondrial processing) beta, [RH, Score=495, Expect=5e-173]} {Dmel: FBgn0038271, UQCR-C1, Ubiquinol-cytochrome c reductase core protein 1, [RH, Score=494, Expect=5e-173]} {Celegans: WBGene00013880, mppb-1, Mitochondrial Processing Peptidase Beta, [RH, Score=379, Expect=6e-128]} {Smed: dd_Smed_v6_7914_0_1, dd_Smed_v6_7914_0_1, [RH, Score=427, Expect=5e-147]} {RNA1509_18919} {RNA1310_8781.1} {RNA815_3008.1} |
| 12. | MligTC455_50924 | 80 | 1.67 | Mlig455_025602 | Neo: - Age: Up-Up-Down |
NELFE | 0.955 | - | - | - | - | 0.955 | - | Mlig455_025602 {REF} {Length: 1327} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=42.3]} {Human: ENSG00000204356, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206357, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000233801, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000231044, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000206268, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]; ENSG00000229363, NELFE, negative elongation factor complex member E, [Score=60.1, Expect=2e-09]} {Mouse: ENSMUSG00000024369, Nelfe, negative elongation factor complex member E, Rdbp, [Score=60.5, Expect=1e-09]} {RNA1509_13692} {RNA1310_22114} {RNA815_11055} |
| 13. | MligTC455_19283 | 267 | 5.56 | Mlig455_007996 | Neo: - Age: - |
0.954 | - | - | - | - | 0.954 | - | Mlig455_007996 {REF} {Length: 2653} {TRANSSPLICED} {Pfam: Pre-mRNA splicing factor [PF12542.10, score=45.8]} {Mouse: ENSMUSG00000040838, Gm11639, predicted gene 11639, [Score=67.8, Expect=2e-11]} {Dmel: FBgn0039210, CG13625, [Score=55.5, Expect=8e-08]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=53.1, Expect=5e-07]} {Smed: dd_Smed_v6_5424_0_1, dd_Smed_v6_5424_0_1, [Score=47.8, Expect=8e-06]} {RNA1509_12373} {RNA1310_32975} {RNA815_21413} | |
| 14. | MligTC455_38528 | 69 | 1.44 | Mlig455_056089 | Neo: - Age: - Region-enriched R5: 3.522/0.00304 |
0.952 | - | - | - | - | 0.952 | - | Mlig455_056089 {REF} {Length: 1581} {RNA1509_47100} {RNA1310_45785} {RNA815_35110} | |
| 15. | MligTC455_39656 | 1038 | 21.63 | Mlig455_027439 | Neo: - Age: Up-Down-Down |
UBR4 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_027439 {REF} {Length: 11746} {TRANSSPLICED} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=853.5]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=1660, Expect=0.0]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=1369, Expect=0.0]} {Dmel: FBgn0011230, poe, purity of essence, [RH, Score=1240, Expect=0.0]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [RH, Score=311, Expect=5e-84]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [RH, Score=376, Expect=6e-104]} {RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793} {RNA1310_49.1, RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793} {RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793, RNA815_537.1} |
| 16. | MligTC455_18556 | 1021 | 21.27 | Mlig455_043306 | Neo: - Age: Up-Up-Down |
FBXO9 | 0.951 | - | - | - | - | 0.951 | - | Mlig455_043306 {REF} {Length: 2490} {TRANSSPLICED} {Pfam: F-box only protein C-terminal region [PF19270.1, score=32.6]; F-box-like [PF12937.9, score=31.6]} {Human: ENSG00000112146, FBXO9, F-box protein 9, [RH, Score=101, Expect=9e-23]} {Mouse: ENSMUSG00000001366, Fbxo9, f-box protein 9, [RH, Score=97.8, Expect=1e-21]} {Dmel: FBgn0038056, CG5961, [RH, Score=95.1, Expect=8e-21]} {Smed: dd_Smed_v6_3570_0_1, dd_Smed_v6_3570_0_1, [RH, Score=90.1, Expect=2e-19]} {RNA1509_21307} {RNA1310_18421.1} {RNA815_1191} |
| 17. | MligTC455_25737 | 479 | 9.99 | Mlig455_008234 | Neo: - Age: Up-Down-Down |
CUL1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_008234 {REF} {Length: 4212} {TRANSSPLICED} {Pfam: Cullin family [PF00888.24, score=558.6]; Cullin protein neddylation domain [PF10557.11, score=87.5]; MarR family [PF12802.9, score=18.9]} {Human: ENSG00000055130, CUL1, cullin 1, [RH, Score=714, Expect=0.0]} {Mouse: ENSMUSG00000029686, Cul1, cullin 1, [RH, Score=714, Expect=0.0]} {Dmel: FBgn0015509, Cul1, Cullin 1, [RH, Score=613, Expect=0.0]} {Celegans: WBGene00000836, cul-1, Cullin-1, [RH, Score=509, Expect=2e-169]} {Smed: dd_Smed_v6_5770_0_1, dd_Smed_v6_5770_0_1, [RH, Score=616, Expect=0.0]} {RNA1509_18310} {RNA1310_2347} {RNA815_213.1} |
| 18. | MligTC455_26450 | 513 | 10.68 | Mlig455_026617, Mlig455_052766 | Neo: - Age: - |
SLC50A1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_026617 {REF} {Length: 542} {Smed: dd_Smed_v6_1574_6_89, dd_Smed_v6_1574_6_89, [Score=65.9, Expect=4e-13]} {RNA1509_10005} {RNA1310_397.1} {RNA815_1257.1} Mlig455_052766 {REF} {Length: 5041} {TRANSSPLICED} {Pfam: Sugar efflux transporter for intercellular exchange [PF03083.18, score=90.2]; Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit [PF08626.13, score=33.9]; ER-Golgi trafficking TRAPP I complex 85 kDa subunit [PF12739.9, score=18.0]} {Human: ENSG00000169241, SLC50A1, solute carrier family 50 member 1, [RH, Score=72.0, Expect=1e-13]} {Mouse: ENSMUSG00000027953, Slc50a1, solute carrier family 50 (sugar transporter), member 1, [RH, Score=87.0, Expect=1e-18]} {Dmel: FBgn0025469, slv, saliva, [Score=98.2, Expect=2e-22]} {Celegans: WBGene00016922, swt-2, Sugar transporter SWEET, [RH, Score=101, Expect=9e-24]} {Smed: dd_Smed_v6_12308_0_1, dd_Smed_v6_12308_0_1, [Score=104, Expect=5e-25]} {RNA1509_23128} {RNA1310_2990} {RNA815_1540} |
| 19. | MligTC455_31514 | 4359 | 90.81 | Mlig455_031839 | Neo: - Age: logFC(26M/2M)=-0.154 |
ACO2 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_031839 {REF} {Length: 3664} {TRANSSPLICED} {Pfam: Aconitase family (aconitate hydratase) [PF00330.22, score=511.8]; Aconitase C-terminal domain [PF00694.21, score=145.7]} {Human: ENSG00000100412, ACO2, aconitase 2, [RH, Score=1147, Expect=0.0]} {Mouse: ENSMUSG00000022477, Aco2, aconitase 2, mitochondrial, [RH, Score=1151, Expect=0.0]} {Dmel: FBgn0010100, Acon, Aconitase, [RH, Score=1150, Expect=0.0]} {Celegans: WBGene00000041, aco-2, Probable aconitate hydratase, mitochondrial, [RH, Score=1148, Expect=0.0]} {Smed: dd_Smed_v6_979_0_1, dd_Smed_v6_979_0_1, [RH, Score=1154, Expect=0.0]} {RNA1509_2297, RNA1509_349} {RNA1310_3217.1, RNA1509_2297, RNA1509_349} {RNA1509_2297, RNA1509_349, RNA815_1749} |
Berezikov Lab - 2020-2021 © ERIBA