Data search
Results for MligTC455_39656
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_39656 | 1038 | 21.63 | Mlig455_027439 | Neo: - Age: Up-Down-Down |
UBR4 | Mlig455_027439 {REF} {Length: 11746} {TRANSSPLICED} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=853.5]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=1660, Expect=0.0]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=1369, Expect=0.0]} {Dmel: FBgn0011230, poe, purity of essence, [RH, Score=1240, Expect=0.0]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [RH, Score=311, Expect=5e-84]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [RH, Score=376, Expect=6e-104]} {RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793} {RNA1310_49.1, RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793} {RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793, RNA815_537.1} |
Cumulative graph for MligTC455_39656
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.507 | 4.704 | 0.53825 | 1.00000 | |
| RegionR2 | 0.226 | 4.704 | 0.51339 | 0.89014 | |
| RegionR3 | 0.189 | 4.704 | 0.48071 | 0.98285 | |
| RegionR4 | 0.506 | 4.704 | 0.10634 | 0.32069 | |
| RegionR5 | 0.22 | 4.704 | 0.36623 | 0.71876 | |
| RegionR6 | -0.011 | 4.704 | 0.96846 | 1.00000 | |
| RegionR7 | 0.048 | 4.704 | 0.89229 | 1.00000 | |
| RegionR8 | -0.671 | 4.704 | 0.15223 | 0.70696 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.979 | 4.704 | 0.07433 | 0.76135 | |
| RegenerationR2 | 0.243 | 4.704 | 0.37959 | 0.80139 | |
| RegenerationR3 | 0.315 | 4.704 | 0.30511 | 0.73624 | |
| RegenerationR4 | -0.394 | 4.704 | 0.21287 | 0.66012 | |
| RegenerationR5 | -0.024 | 4.704 | 0.93360 | 1.00000 | |
| RegenerationR6 | 0.164 | 4.704 | 0.62115 | 0.88149 | |
| RegenerationBL | -0.053 | 4.704 | 0.90397 | 1.00000 | |
| RegenerationTP | 0.376 | 4.704 | 0.38469 | 0.81881 |
Genes with expression patterns similar to MligTC455_39656
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_39656 | 1038 | 21.63 | Mlig455_027439 | Neo: - Age: Up-Down-Down |
UBR4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_027439 {REF} {Length: 11746} {TRANSSPLICED} {Pfam: E3 ubiquitin-protein ligase UBR4 [PF13764.8, score=853.5]} {Human: ENSG00000127481, UBR4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=1660, Expect=0.0]} {Mouse: ENSMUSG00000066036, Ubr4, ubiquitin protein ligase E3 component n-recognin 4, [RH, Score=1369, Expect=0.0]} {Dmel: FBgn0011230, poe, purity of essence, [RH, Score=1240, Expect=0.0]} {Celegans: WBGene00016650, ubr-4, UBR E3 ubiquitin ligase homolog, [RH, Score=311, Expect=5e-84]} {Smed: dd_Smed_v6_2422_0_1, dd_Smed_v6_2422_0_1, [RH, Score=376, Expect=6e-104]} {RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793} {RNA1310_49.1, RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793} {RNA1509_21500, RNA1509_26739, RNA1509_40863, RNA1509_47110, RNA1509_54143, RNA1509_793, RNA815_537.1} |
| 2. | MligTC455_38684 | 433 | 9.03 | Mlig455_037388 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_037388 {REF} {Length: 3024} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.4]} {RNA1509_41283} {RNA1310_27622.1, RNA1509_41283} {RNA1509_41283, RNA815_15448} | |
| 3. | MligTC455_31946 | 1677 | 34.94 | Mlig455_023377, Mlig455_046956, Mlig455_068953 | Neo: - Age: logFC(26M/2M)=-0.390 Region-specific R4: 2.194 Region-enriched R4: 2.064/0.00000 Regeneration-downregulated R4: -1.553 Regeneration-depleted R4: -1.553 |
0.96 | - | - | - | - | 0.960 | - | Mlig455_023377 {REF} {Length: 4240} {Pfam: Protein of unknown function (DUF229) [PF02995.19, score=270.9]} {Dmel: FBgn0038318, CG6236, [Score=284, Expect=1e-85]} {Celegans: WBGene00012762, Y41E3.1, [Score=272, Expect=2e-81]} {Smed: dd_Smed_v6_4842_0_1, dd_Smed_v6_4842_0_1, [Score=211, Expect=1e-59]} {RNA1509_42765} {RNA1310_7939} {RNA815_9277} Mlig455_046956 {REF} {Length: 5976} {Pfam: Protein of unknown function (DUF229) [PF02995.19, score=269.2]} {Dmel: FBgn0038318, CG6236, [Score=281, Expect=1e-84]} {Celegans: WBGene00012762, Y41E3.1, [Score=271, Expect=5e-81]} {Smed: dd_Smed_v6_4842_0_1, dd_Smed_v6_4842_0_1, [Score=214, Expect=1e-60]} {RNA1509_30193, RNA1509_33626, RNA1509_35389, RNA1509_42765} {RNA1310_6928, RNA1509_30193, RNA1509_33626, RNA1509_35389, RNA1509_42765} {RNA1509_30193, RNA1509_33626, RNA1509_35389, RNA1509_42765, RNA815_9277} Mlig455_068953 {REF} {Length: 3566} {Pfam: Protein of unknown function (DUF229) [PF02995.19, score=271.4]} {Dmel: FBgn0038318, CG6236, [Score=283, Expect=3e-85]} {Celegans: WBGene00012762, Y41E3.1, [Score=273, Expect=1e-81]} {Smed: dd_Smed_v6_4842_0_1, dd_Smed_v6_4842_0_1, [Score=213, Expect=4e-60]} {RNA1509_42765} {RNA1310_6928} {RNA815_9277} |
|
| 4. | MligTC455_02688 | 477 | 9.93 | Mlig455_021762 | Neo: - Age: - |
0.952 | - | - | - | 0.952 | - | - | Mlig455_021762 {REF} {Length: 998} {NoTransDecoderORF} {RNA1509_7515} {RNA1310_2732} {RNA815_7751} |