Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_02963 | 73 | 1.53 | Mlig455_045230 | Neo: - Age: - |
TRO | Mlig455_045230 {REF} {Length: 4751} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=88.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=52.3]; Type III restriction enzyme, res subunit [PF04851.17, score=36.1]; DEAD/DEAH box helicase [PF00270.31, score=35.7]; Helicase conserved C-terminal domain [PF00271.33, score=35.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=22.0]} {Human: ENSG00000067445, TRO, trophinin, [Score=68.2, Expect=1e-10]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=73.9, Expect=1e-12]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=55.8, Expect=3e-07]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=67.4, Expect=6e-11]} {Smed: dd_Smed_v6_5587_0_1, dd_Smed_v6_5587_0_1, [RH, Score=239, Expect=1e-65]} {RNA1509_51526} {RNA1310_2739.3} {RNA815_29478} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 0.103 | 1.755 | 0.94136 | 1.00000 | |
RegionR2 | 2.214 | 1.755 | 0.02921 | 0.19316 | |
RegionR3 | -0.342 | 1.755 | 0.56066 | 1.00000 | |
RegionR4 | -0.644 | 1.755 | 0.58969 | 0.90474 | |
RegionR5 | -1.698 | 1.755 | 0.00929 | 0.05473 | |
RegionR6 | -0.832 | 1.755 | 0.25122 | 0.83740 | |
RegionR7 | 0.724 | 1.755 | 0.51870 | 1.00000 | |
RegionR8 | 0.475 | 1.755 | 0.75094 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -3.258 | 1.755 | 0.61292 | 1.00000 | |
RegenerationR2 | -1.434 | 1.755 | 0.11314 | 0.52469 | |
RegenerationR3 | 0.063 | 1.755 | 0.95250 | 1.00000 | |
RegenerationR4 | -0.964 | 1.755 | 0.32279 | 0.76086 | |
RegenerationR5 | -0.964 | 1.755 | 0.28015 | 0.70941 | |
RegenerationR6 | -0.184 | 1.755 | 0.81481 | 0.98468 | |
RegenerationBL | -3.961 | 1.755 | 0.12427 | 0.41895 | |
RegenerationTP | -4.079 | 1.755 | 0.09353 | 0.47980 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_02963 | 73 | 1.53 | Mlig455_045230 | Neo: - Age: - |
TRO | 5 | 1.000 | 1.000 | 1.000 | - | 1.000 | 1.000 | Mlig455_045230 {REF} {Length: 4751} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=88.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=52.3]; Type III restriction enzyme, res subunit [PF04851.17, score=36.1]; DEAD/DEAH box helicase [PF00270.31, score=35.7]; Helicase conserved C-terminal domain [PF00271.33, score=35.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=22.0]} {Human: ENSG00000067445, TRO, trophinin, [Score=68.2, Expect=1e-10]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=73.9, Expect=1e-12]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=55.8, Expect=3e-07]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=67.4, Expect=6e-11]} {Smed: dd_Smed_v6_5587_0_1, dd_Smed_v6_5587_0_1, [RH, Score=239, Expect=1e-65]} {RNA1509_51526} {RNA1310_2739.3} {RNA815_29478} |
2. | MligTC455_47569 | 100 | 2.08 | Mlig455_006613 | Neo: - Age: - Region-enriched R4: 5.038/0.00332 |
PHF5A | 1.675 | - | - | 0.951 | - | - | 0.724 | Mlig455_006613 {REF} {Length: 1064} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=31.4} {Pfam: PHF5-like protein [PF03660.16, score=168.0]} {Human: ENSG00000100410, PHF5A, PHD finger protein 5A, [RH, Score=212, Expect=1e-72]} {Mouse: ENSMUSG00000061360, Phf5a, PHD finger protein 5A, [RH, Score=212, Expect=8e-73]} {Dmel: FBgn0031822, Phf5a, PHD finger protein 5a, [RH, Score=206, Expect=1e-70]} {Celegans: WBGene00004016, phf-5, PHF-5; PHd Finger family, [RH, Score=206, Expect=1e-70]} {Smed: dd_Smed_v6_2656_0_1, dd_Smed_v6_2656_0_1, [RH, Score=203, Expect=1e-69]} {RNA1509_47058, RNA1509_5116} {RNA1310_35145.2, RNA1509_47058, RNA1509_5116} {RNA1509_47058, RNA1509_5116, RNA815_35454.1} |
3. | MligTC455_36129 | 73 | 1.52 | Mlig455_062117 | Neo: - Age: Up-Down-Down |
0.994 | - | - | 0.994 | - | - | - | Mlig455_062117 {REF} {Length: 4853} {tRNA: Val(CAC),pseudo, score=24.2} {RNA1509_50856} {RNA1310_20336, RNA1509_50856} {RNA1509_50856, RNA815_19523} | |
4. | MligTC455_21364 | 70 | 1.45 | Mlig455_041353 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 3.091/0.03768 |
ELAVL4 | 0.987 | - | - | - | - | - | 0.987 | Mlig455_041353 {REF} {Length: 2933} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=206.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=40.6]; Occluded RNA-recognition motif [PF16842.7, score=24.8]; RNA binding motif [PF08777.13, score=20.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=18.6]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [RH, Score=368, Expect=3e-125]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [RH, Score=363, Expect=6e-123]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [RH, Score=351, Expect=1e-118]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [RH, Score=365, Expect=1e-124]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [RH, Score=363, Expect=2e-123]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [RH, Score=351, Expect=5e-119]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [RH, Score=381, Expect=2e-126]} {Celegans: WBGene00001368, exc-7, [Score=238, Expect=1e-73]} {Smed: dd_Smed_v6_8376_0_1, dd_Smed_v6_8376_0_1, [RH, Score=254, Expect=5e-79]} {RNA1509_10693, RNA1509_11995, RNA1509_5287} {RNA1310_61526, RNA1509_10693, RNA1509_11995} {RNA1509_10693, RNA1509_11995, RNA815_4415.1} |
5. | MligTC455_13603 | 25 | 0.52 | Mlig455_068071 | Neo: - Age: - |
0.986 | - | - | 0.986 | - | - | - | Mlig455_068071 {REF} {Length: 71} {NoTransDecoderORF} {RNA1310_36160} | |
6. | MligTC455_22796 | 48 | 1.01 | Mlig455_066731, Mlig455_066745 | Neo: - Age: Up-Down-Up Region-enriched R5: 5.599/0.00476 Regeneration-upregulated BL: 6.528 Regeneration-enriched BL: 6.528 |
ANKRD23 | 0.978 | - | - | 0.978 | - | - | - | Mlig455_066731 {REF} {Length: 575} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.8]; Ankyrin repeats (many copies) [PF13637.8, score=55.0]; Ankyrin repeats (many copies) [PF13857.8, score=43.9]; Ankyrin repeat [PF00023.32, score=42.1]; Ankyrin repeat [PF13606.8, score=32.2]} {Human: ENSG00000163126, ANKRD23, ankyrin repeat domain 23, [Score=65.9, Expect=1e-12]; ENSG00000085185, BCORL1, BCL6 corepressor like 1, [Score=64.3, Expect=9e-12]; ENSG00000183337, BCOR, BCL6 corepressor, [Score=63.9, Expect=7e-12]; ENSG00000064490, RFXANK, regulatory factor X associated ankyrin containing protein, [Score=63.9, Expect=5e-12]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=63.9, Expect=2e-11]; ENSG00000101752, MIB1, mindbomb E3 ubiquitin protein ligase 1, [Score=62.8, Expect=3e-11]; ENSG00000029534, ANK1, ankyrin 1, [Score=62.8, Expect=4e-11]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=65.5, Expect=3e-12]; ENSMUSG00000036959, Bcorl1, BCL6 co-repressor-like 1, [Score=63.9, Expect=9e-12]; ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=63.9, Expect=1e-11]; ENSMUSG00000024294, Mib1, mindbomb E3 ubiquitin protein ligase 1, [Score=63.2, Expect=2e-11]} {Dmel: FBgn0261554, CG42672, [Score=65.9, Expect=2e-12]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=56.6, Expect=1e-09]} {Smed: dd_Smed_v6_2072_0_20, dd_Smed_v6_2072_0_20, [Score=63.2, Expect=7e-12]} {RNA1509_15876} {RNA1310_604.1} {RNA815_475} Mlig455_066745 {REF} {Length: 575} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=70.8]; Ankyrin repeats (many copies) [PF13637.8, score=55.0]; Ankyrin repeats (many copies) [PF13857.8, score=43.9]; Ankyrin repeat [PF00023.32, score=42.1]; Ankyrin repeat [PF13606.8, score=32.2]} {Human: ENSG00000163126, ANKRD23, ankyrin repeat domain 23, [Score=65.9, Expect=1e-12]; ENSG00000085185, BCORL1, BCL6 corepressor like 1, [Score=64.3, Expect=9e-12]; ENSG00000183337, BCOR, BCL6 corepressor, [Score=63.9, Expect=7e-12]; ENSG00000064490, RFXANK, regulatory factor X associated ankyrin containing protein, [Score=63.9, Expect=5e-12]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=63.9, Expect=2e-11]; ENSG00000101752, MIB1, mindbomb E3 ubiquitin protein ligase 1, [Score=62.8, Expect=3e-11]; ENSG00000029534, ANK1, ankyrin 1, [Score=62.8, Expect=4e-11]} {Mouse: ENSMUSG00000053580, Tanc2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=65.5, Expect=3e-12]; ENSMUSG00000036959, Bcorl1, BCL6 co-repressor-like 1, [Score=63.9, Expect=9e-12]; ENSMUSG00000036333, Kidins220, kinase D-interacting substrate 220, [Score=63.9, Expect=1e-11]; ENSMUSG00000024294, Mib1, mindbomb E3 ubiquitin protein ligase 1, [Score=63.2, Expect=2e-11]} {Dmel: FBgn0261554, CG42672, [Score=65.9, Expect=2e-12]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=56.6, Expect=1e-09]} {Smed: dd_Smed_v6_2072_0_20, dd_Smed_v6_2072_0_20, [Score=63.2, Expect=7e-12]} {RNA1509_15876} {RNA1310_604.1} {RNA815_475} |
7. | MligTC455_15803 | 191 | 3.98 | Mlig455_039323 | Neo: - Age: - |
RGS12 | 0.977 | - | - | 0.977 | - | - | - | Mlig455_039323 {REF} {Length: 3633} {TRANSSPLICED} {Pfam: Regulator of G protein signaling domain [PF00615.21, score=106.4]; PDZ domain [PF00595.26, score=54.0]; PDZ domain [PF17820.3, score=47.7]; Raf-like Ras-binding domain [PF02196.17, score=45.1]; PDZ domain [PF13180.8, score=21.4]} {Human: ENSG00000159788, RGS12, regulator of G protein signaling 12, [RH, Score=183, Expect=2e-47]} {Mouse: ENSMUSG00000029101, Rgs12, regulator of G-protein signaling 12, [RH, Score=186, Expect=3e-48]} {Dmel: FBgn0020278, loco, locomotion defects, [Score=147, Expect=6e-36]} {Celegans: WBGene00004345, rgs-2, Regulator of G-protein signaling rgs-2, [Score=99.4, Expect=6e-24]} {Smed: dd_Smed_v6_8463_0_2, dd_Smed_v6_8463_0_2, [Score=105, Expect=2e-24]} {RNA1509_57496} {RNA1310_5606} {RNA815_31965} |
8. | MligTC455_02440 | 25 | 0.51 | Mlig455_007726, Mlig455_007738 | Neo: - Age: Up-Down-Up |
0.973 | - | - | 0.973 | - | - | - | Mlig455_007726 {REF} {Length: 1301} {RNA1310_37266} {RNA815_21933} Mlig455_007738 {REF} {Length: 3651} {RNA1310_37266} {RNA815_21933} |
|
9. | MligTC455_10651 | 37 | 0.76 | Mlig455_050743 | Neo: - Age: - |
0.973 | - | - | 0.973 | - | - | - | Mlig455_050743 {REF} {Length: 486} {NoTransDecoderORF} {RNA1310_45533} | |
10. | MligTC455_57738 | 33 | 0.69 | Mlig455_050734 | Neo: - Age: - |
0.973 | - | - | 0.973 | - | - | - | Mlig455_050734 {REF} {Length: 453} {NoTransDecoderORF} {RNA1310_45533} | |
11. | MligTC455_16044 | 122 | 2.55 | Mlig455_053002 | Neo: Irradiation Age: - Region-enriched R4: 4.066/0.00030 |
0.971 | - | - | 0.971 | - | - | - | Mlig455_053002 {REF} {Length: 2511} {TRANSSPLICED} {RNA1509_32955} {RNA1310_8926.1} {RNA815_7573} | |
12. | MligTC455_33448 | 77 | 1.61 | Mlig455_023212, Mlig455_037490, Mlig455_053804 | Neo: - Age: Down-Up-Down Region-enriched R2: 4.691/0.03915 |
0.965 | - | - | 0.965 | - | - | - | Mlig455_023212 {REF} {Length: 2266} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=30.6]; DNA polymerase type B, organellar and viral [PF03175.15, score=25.4]} {Celegans: WBGene00016348, C33E10.6, [Score=216, Expect=4e-59]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=200, Expect=4e-55]} {RNA1509_26772} {RNA1310_4650} {RNA815_24522} Mlig455_037490 {REF} {Length: 4620} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=27.4]} {Celegans: WBGene00022511, ZC53.4, [Score=243, Expect=3e-65]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [RH, Score=527, Expect=7e-170]} {RNA1509_26772} {RNA1310_4650, RNA1509_26772} {RNA1509_26772, RNA815_12457} Mlig455_053804 {REF} {Length: 4594} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=27.7]} {Celegans: WBGene00022511, ZC53.4, [Score=245, Expect=6e-66]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [RH, Score=532, Expect=8e-172]} {RNA1509_26772} {RNA1310_4650} {RNA815_12457} |
|
13. | MligTC455_46227 | 24 | 0.5 | Mlig455_045153 | Neo: - Age: - Region-enriched R4: 2.763/0.03631 |
0.963 | - | - | 0.963 | - | - | - | Mlig455_045153 {REF} {Length: 2701} {NoTransDecoderORF} {RNA1509_41972} {RNA1310_35514} {RNA815_57191.1} | |
14. | MligTC455_14256 | 110 | 2.29 | Mlig455_054411, Mlig455_070510 | Neo: - Age: - |
0.961 | - | - | 0.961 | - | - | - | Mlig455_054411 {REF} {Length: 620} {NoTransDecoderORF} {RNA1310_128197} {RNA815_52174} Mlig455_070510 {REF} {Length: 1954} {NoTransDecoderORF} {RNA1509_48776} {RNA1310_74688.1} {RNA815_10333} |
|
15. | MligTC455_18616 | 112 | 2.32 | Mlig455_003658, Mlig455_003870 | Neo: - Age: Up-Down-Down |
TUT4 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_003658 {REF} {Length: 5734} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=173.1]; Cid1 family poly A polymerase [PF03828.21, score=66.6]; Zinc knuckle [PF00098.25, score=18.7]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=124, Expect=4e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=205, Expect=3e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=259, Expect=5e-70]} {RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1310_1393.1, RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1509_51224, RNA1509_53960, RNA1509_5815, RNA815_619} Mlig455_003870 {REF} {Length: 5673} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=172.7]; Cid1 family poly A polymerase [PF03828.21, score=67.3]; Zinc knuckle [PF00098.25, score=19.0]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=123, Expect=7e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=204, Expect=9e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=262, Expect=3e-71]} {RNA1509_5815} {RNA1310_1393.1} {RNA815_619} |
16. | MligTC455_41742 | 48 | 1 | Mlig455_002367, Mlig455_044569 | Neo: - Age: - |
0.956 | - | - | 0.956 | - | - | - | Mlig455_002367 {REF} {Length: 416} {RNA1310_97120} {RNA815_50408} Mlig455_044569 {REF} {Length: 416} {RNA1310_97120} {RNA815_50408} |
|
17. | MligTC455_10775 | 50 | 1.05 | Mlig455_023939 | Neo: - Age: - |
GABBR1 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_023939 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=159.6]; Receptor family ligand binding region [PF01094.30, score=113.8]; Periplasmic binding protein [PF13458.8, score=20.4]} {Human: ENSG00000237112, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000206466, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000232569, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000237051, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000206511, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000204681, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]; ENSG00000232632, GABBR1, gamma-aminobutyric acid type B receptor subunit 1, [Score=166, Expect=5e-42]} {Mouse: ENSMUSG00000024462, Gabbr1, gamma-aminobutyric acid (GABA) B receptor, 1, [Score=166, Expect=6e-42]} {Dmel: FBgn0031275, GABA-B-R3, metabotropic GABA-B receptor subtype 3, [Score=151, Expect=3e-37]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=123, Expect=8e-29]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=72.4, Expect=6e-14]} {RNA1509_12849} {RNA1310_9423.1} {RNA815_7350.2} |
18. | MligTC455_31700 | 61 | 1.27 | Mlig455_029534, Mlig455_043006, Mlig455_043044, Mlig455_043060 | Neo: Germline Age: Up-Down-Down |
0.95 | - | - | 0.950 | - | - | - | Mlig455_029534 {REF} {Length: 233} {NoTransDecoderORF} {RNA1310_141162} Mlig455_043006 {REF} {Length: 2891} {Smed: dd_Smed_v6_24671_0_1, dd_Smed_v6_24671_0_1, [Score=71.6, Expect=7e-14]} {RNA1509_18736} {RNA1310_33325} {RNA815_43331} Mlig455_043044 {REF} {Length: 2804} {Smed: dd_Smed_v6_24671_0_1, dd_Smed_v6_24671_0_1, [Score=70.1, Expect=2e-13]} {RNA1509_18736} {RNA1310_33325} {RNA815_43331} Mlig455_043060 {REF} {Length: 3069} {Smed: dd_Smed_v6_24671_0_1, dd_Smed_v6_24671_0_1, [Score=71.2, Expect=8e-14]} {RNA1509_18736} {RNA1310_33325} {RNA815_43331} |