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Results for MligTC455_18616

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_18616 112 2.32 Mlig455_003658, Mlig455_003870

Neo: -

Age: Up-Down-Down

 TUT4

Mlig455_003658 {REF} {Length: 5734} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=173.1]; Cid1 family poly A polymerase [PF03828.21, score=66.6]; Zinc knuckle [PF00098.25, score=18.7]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=124, Expect=4e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=205, Expect=3e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=259, Expect=5e-70]} {RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1310_1393.1, RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1509_51224, RNA1509_53960, RNA1509_5815, RNA815_619}

Mlig455_003870 {REF} {Length: 5673} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=172.7]; Cid1 family poly A polymerase [PF03828.21, score=67.3]; Zinc knuckle [PF00098.25, score=19.0]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=123, Expect=7e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=204, Expect=9e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=262, Expect=3e-71]} {RNA1509_5815} {RNA1310_1393.1} {RNA815_619}

Cumulative graph for MligTC455_18616

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.908 2.218 0.58787 1.00000
RegionR2 0.498 2.218 0.58174 0.93785
RegionR3 2.207 2.218 0.00541 0.10062
RegionR4 0.841 2.218 0.38372 0.70835
RegionR5 0.901 2.218 0.23147 0.53851
RegionR6 -0.365 2.218 0.89141 1.00000
RegionR7 -5.055 2.218 0.04321 0.39990
RegionR8 0.065 2.218 0.77874 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -3.706 2.218 0.56299 1.00000
RegenerationR2 2.172 2.218 0.00876 0.14935
RegenerationR3 0.183 2.218 0.80984 0.98484
RegenerationR4 0.709 2.218 0.48253 0.85997
RegenerationR5 0.726 2.218 0.37907 0.78642
RegenerationR6 0.928 2.218 0.42563 0.75513
RegenerationBL 1.936 2.218 0.31249 0.67834
RegenerationTP 1.97 2.218 0.37915 0.81466


Genes with expression patterns similar to MligTC455_18616

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_18616 112 2.32 Mlig455_003658, Mlig455_003870

Neo: -

Age: Up-Down-Down

 TUT4 5 1.000 1.000 - 1.000 1.000 1.000

Mlig455_003658 {REF} {Length: 5734} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=173.1]; Cid1 family poly A polymerase [PF03828.21, score=66.6]; Zinc knuckle [PF00098.25, score=18.7]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=124, Expect=4e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=205, Expect=3e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=259, Expect=5e-70]} {RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1310_1393.1, RNA1509_51224, RNA1509_53960, RNA1509_5815} {RNA1509_51224, RNA1509_53960, RNA1509_5815, RNA815_619}

Mlig455_003870 {REF} {Length: 5673} {TRANSSPLICED} {Pfam: TUTase nucleotidyltransferase domain [PF19088.2, score=172.7]; Cid1 family poly A polymerase [PF03828.21, score=67.3]; Zinc knuckle [PF00098.25, score=19.0]} {Human: ENSG00000134744, TUT4, terminal uridylyl transferase 4, [RH, Score=327, Expect=6e-91]} {Mouse: ENSMUSG00000034610, Tut4, terminal uridylyl transferase 4, [RH, Score=328, Expect=2e-91]} {Dmel: FBgn0260780, wisp, wispy, [Score=123, Expect=7e-28]} {Celegans: WBGene00019629, cid-1, Caffeine Induced Death (S. pombe Cid) homolog, [RH, Score=204, Expect=9e-53]} {Smed: dd_Smed_v6_3589_0_1, dd_Smed_v6_3589_0_1, [RH, Score=262, Expect=3e-71]} {RNA1509_5815} {RNA1310_1393.1} {RNA815_619}
2. MligTC455_47373 30 0.63 Mlig455_050214, Mlig455_050224

Neo: -

Age: -

 0.967 - - - - 0.967 -

Mlig455_050214 {REF} {Length: 754} {RNA1310_130371}

Mlig455_050224 {REF} {Length: 769} {RNA1310_130371}
3. MligTC455_10393 43 0.9 Mlig455_022188

Neo: Int S/G2/M

Age: Down-Up-Up

 0.965 - - - - - 0.965 Mlig455_022188 {REF} {Length: 1964} {Pfam: EF hand [PF00036.34, score=40.5]; EF-hand domain pair [PF13499.8, score=29.0]; EF-hand domain [PF13405.8, score=27.2]; EF-hand domain pair [PF13833.8, score=22.9]; EF hand [PF13202.8, score=18.2]} {RNA1509_26113} {RNA1310_28941.1} {RNA815_15871.1}
4. MligTC455_09085 27 0.57 Mlig455_020791

Neo: -

Age: -

 FBXL7 0.96 - - - - 0.960 - Mlig455_020791 {REF} {Length: 1918} {Pfam: F-box-like [PF12937.9, score=52.5]; F-box domain [PF00646.35, score=39.7]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=63.2, Expect=2e-10]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=62.4, Expect=3e-10]; ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=60.1, Expect=1e-09]} {RNA1509_13719} {RNA1310_4290.1} {RNA815_32073}
5. MligTC455_35467 43 0.9 Mlig455_047588

Neo: -

Age: -

 IRX2 0.96 - - - - - 0.960 Mlig455_047588 {REF} {Length: 1304} {Pfam: Homeobox KN domain [PF05920.13, score=56.8]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=45.4]; Homeodomain [PF00046.31, score=32.4]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.0, Expect=8e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.0, Expect=7e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=76.6, Expect=1e-14]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.3, Expect=1e-14]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=7e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=1e-13]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=3e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.4, Expect=4e-15]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.0, Expect=4e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=7e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-14]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=5e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=3e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.4, Expect=6e-18]} {RNA1310_82642} {RNA815_17918.1}
6. MligTC455_35468 44 0.92 Mlig455_047603

Neo: -

Age: -

 IRX2 0.96 - - - - - 0.960 Mlig455_047603 {REF} {Length: 1843} {Pfam: Homeobox KN domain [PF05920.13, score=56.8]; Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=45.4]; Homeodomain [PF00046.31, score=32.4]} {Human: ENSG00000170561, IRX2, iroquois homeobox 2, [Score=77.0, Expect=8e-15]; ENSG00000176842, IRX5, iroquois homeobox 5, [Score=77.0, Expect=7e-15]; ENSG00000113430, IRX4, iroquois homeobox 4, [Score=76.6, Expect=1e-14]; ENSG00000159387, IRX6, iroquois homeobox 6, [Score=76.3, Expect=1e-14]; ENSG00000170549, IRX1, iroquois homeobox 1, [Score=73.9, Expect=7e-14]; ENSG00000177508, IRX3, iroquois homeobox 3, [Score=73.6, Expect=1e-13]} {Mouse: ENSMUSG00000021604, Irx4, Iroquois homeobox 4, [Score=77.8, Expect=3e-15]; ENSMUSG00000031737, Irx5, Iroquois homeobox 5, [Score=77.4, Expect=4e-15]; ENSMUSG00000001504, Irx2, Iroquois homeobox 2, [Score=77.0, Expect=4e-15]; ENSMUSG00000031738, Irx6, Iroquois homeobox 6, [Score=76.6, Expect=7e-15]; ENSMUSG00000060969, Irx1, Iroquois homeobox 1, [Score=74.3, Expect=4e-14]} {Dmel: FBgn0015919, caup, caupolican, [Score=80.1, Expect=5e-16]} {Celegans: WBGene00007984, irx-1, Putative iroquois-class homeodomain protein irx-1, [Score=73.2, Expect=3e-14]} {Smed: dd_Smed_v6_14656_0_1, dd_Smed_v6_14656_0_1, [Score=82.4, Expect=6e-18]} {RNA1509_12832} {RNA1310_22657} {RNA815_13207}
7. MligTC455_02963 73 1.53 Mlig455_045230

Neo: -

Age: -

 TRO 0.957 - - - - - 0.957 Mlig455_045230 {REF} {Length: 4751} {TRANSSPLICED} {Pfam: Zinc-finger of C2H2 type [PF12874.9, score=88.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=52.3]; Type III restriction enzyme, res subunit [PF04851.17, score=36.1]; DEAD/DEAH box helicase [PF00270.31, score=35.7]; Helicase conserved C-terminal domain [PF00271.33, score=35.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=22.0]} {Human: ENSG00000067445, TRO, trophinin, [Score=68.2, Expect=1e-10]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=73.9, Expect=1e-12]} {Dmel: FBgn0038889, Fancm, Fanconi anemia group M helicase, [Score=55.8, Expect=3e-07]} {Celegans: WBGene00008400, drh-3, Dicer Related Helicase, [Score=67.4, Expect=6e-11]} {Smed: dd_Smed_v6_5587_0_1, dd_Smed_v6_5587_0_1, [RH, Score=239, Expect=1e-65]} {RNA1509_51526} {RNA1310_2739.3} {RNA815_29478}
8. MligTC455_09082 24 0.5 Mlig455_020724

Neo: -

Age: Down-Up-Down

 FBXL7 0.957 - - - - 0.957 - Mlig455_020724 {REF} {Length: 2713} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=56.5]; F-box domain [PF00646.35, score=39.2]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=62.0, Expect=9e-11]} {Mouse: ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=61.6, Expect=1e-10]} {RNA1509_24740} {RNA1310_14764} {RNA815_32073}
9. MligTC455_34319 5 0.1 Mlig455_058865

Neo: -

Age: -

 MSI2 0.954 - - - - 0.954 - Mlig455_058865 {REF} {Length: 1158} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.2]; RNA recognition motif [PF16367.7, score=20.0]} {Human: ENSG00000153944, MSI2, musashi RNA binding protein 2, [Score=120, Expect=1e-33]} {Mouse: ENSMUSG00000069769, Msi2, musashi RNA-binding protein 2, [RH, Score=122, Expect=3e-36]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=120, Expect=7e-34]} {Celegans: WBGene00003423, msi-1, MuSashI (Fly neural) family; Neural RNA-binding protein MSI-1, [Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_8902_0_1, dd_Smed_v6_8902_0_1, [Score=145, Expect=1e-42]} {RNA1509_2174} {RNA1310_73027} {RNA815_1264}
10. MligTC455_21364 70 1.45 Mlig455_041353

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.091/0.03768

 ELAVL4 0.953 - - - - - 0.953 Mlig455_041353 {REF} {Length: 2933} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=206.5]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=40.6]; Occluded RNA-recognition motif [PF16842.7, score=24.8]; RNA binding motif [PF08777.13, score=20.5]; Nup53/35/40-type RNA recognition motif [PF14605.8, score=18.6]} {Human: ENSG00000162374, ELAVL4, ELAV like RNA binding protein 4, [RH, Score=368, Expect=3e-125]; ENSG00000107105, ELAVL2, ELAV like RNA binding protein 2, [RH, Score=363, Expect=6e-123]; ENSG00000196361, ELAVL3, ELAV like RNA binding protein 3, [RH, Score=351, Expect=1e-118]} {Mouse: ENSMUSG00000028546, Elavl4, ELAV like RNA binding protein 4, [RH, Score=365, Expect=1e-124]; ENSMUSG00000008489, Elavl2, ELAV like RNA binding protein 1, [RH, Score=363, Expect=2e-123]; ENSMUSG00000003410, Elavl3, ELAV like RNA binding protein 3, [RH, Score=351, Expect=5e-119]} {Dmel: FBgn0010263, Rbp9, RNA-binding protein 9, [RH, Score=381, Expect=2e-126]} {Celegans: WBGene00001368, exc-7, [Score=238, Expect=1e-73]} {Smed: dd_Smed_v6_8376_0_1, dd_Smed_v6_8376_0_1, [RH, Score=254, Expect=5e-79]} {RNA1509_10693, RNA1509_11995, RNA1509_5287} {RNA1310_61526, RNA1509_10693, RNA1509_11995} {RNA1509_10693, RNA1509_11995, RNA815_4415.1}
11. MligTC455_13635 16 0.33 Mlig455_014568

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_014568 {REF} {Length: 1825}
12. MligTC455_06959 13 0.26 Mlig455_054346

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_054346 {REF} {Length: 3898} {Celegans: WBGene00013762, Y113G7B.12, [Score=55.1, Expect=2e-07]} {RNA1310_120823} {RNA815_63491}

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