TomoSeq data search

Data search

Results for MligTC455_03416

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_03416

84

1.76

Mlig455_023975

Neo: -

Age: -

Mlig455_023975 {REF} {Length: 498} {TRANSSPLICED} {RNA1509_44734} {RNA1310_54408} {RNA815_31392}

Cumulative graph for MligTC455_03416

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.524	1.906	0.99972	1.00000
RegionR2	0.995	1.906	0.45687	0.84433
RegionR3	1.542	1.906	0.18572	0.72014
RegionR4	2.33	1.906	0.07731	0.25883
RegionR5	-0.027	1.906	0.76978	1.00000
RegionR6	1.063	1.906	0.37427	0.95493
RegionR7	-0.925	1.906	0.93758	1.00000
RegionR8	-3.455	1.906	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-1.826	1.906	0.99987	1.00000
RegenerationR2	-4.223	1.906	0.00031	0.02342
RegenerationR3	-0.121	1.906	0.85112	0.99875
RegenerationR4	-0.149	1.906	0.82281	0.99531
RegenerationR5	0.826	1.906	0.32615	0.74825
RegenerationR6	0.353	1.906	0.69240	0.92021
RegenerationBL	2.123	1.906	0.22357	0.57236
RegenerationTP	2.287	1.906	0.33961	0.78304

Genes with expression patterns similar to MligTC455_03416

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_03416	84	1.76	Mlig455_023975	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023975 {REF} {Length: 498} {TRANSSPLICED} {RNA1509_44734} {RNA1310_54408} {RNA815_31392}
2.	MligTC455_03417	85	1.78	Mlig455_066271	Neo: - Age: -	SLC23A1	5.925	0.988	1.000	0.994	0.970	0.983	0.990	Mlig455_066271 {REF} {Length: 3039} {Pfam: Permease family [PF00860.22, score=174.5]} {Human: ENSG00000170482, SLC23A1, solute carrier family 23 member 1, [Score=208, Expect=1e-61]; ENSG00000089057, SLC23A2, solute carrier family 23 member 2, [Score=206, Expect=2e-60]} {Mouse: ENSMUSG00000029847, Slc23a4, solute carrier family 23 member 4, [Score=221, Expect=2e-66]} {Dmel: FBgn0037807, CG6293, [Score=172, Expect=1e-48]} {Celegans: WBGene00011593, T07G12.2, [Score=176, Expect=3e-50]} {Smed: dd_Smed_v6_9401_0_1, dd_Smed_v6_9401_0_1, [Score=186, Expect=6e-54]} {RNA1509_44734} {RNA1310_24106} {RNA815_18928}
3.	MligTC455_18831	235	4.9	Mlig455_003570	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.632	DAB2	2.395	-	-	0.713	0.970	-	0.712	Mlig455_003570 {REF} {Length: 2634} {TRANSSPLICED} {Human: ENSG00000153071, DAB2, DAB2, clathrin adaptor protein, [Score=58.5, Expect=2e-08]} {Celegans: WBGene00000894, dab-1, DAB (Drosophila disabled) homolog, [Score=65.1, Expect=4e-11]} {RNA1509_3037} {RNA1310_10505.1, RNA1509_3037} {RNA1509_3037, RNA815_3570.1}
4.	MligTC455_17477	47	0.98	Mlig455_053346	Neo: - Age: -		0.974	-	-	-	0.974	-	-	Mlig455_053346 {REF} {Length: 2041} {RNA1509_20382} {RNA1310_59327} {RNA815_58492}
5.	MligTC455_08029	56	1.17	Mlig455_005478	Neo: - Age: -		0.966	-	-	-	0.966	-	-	Mlig455_005478 {REF} {Length: 968} {NoTransDecoderORF} {RNA1310_138835}
6.	MligTC455_22181	42	0.87	Mlig455_015815	Neo: - Age: -	SIM1	0.964	-	-	-	0.964	-	-	Mlig455_015815 {REF} {Length: 3132} {Pfam: PAS domain [PF14598.8, score=70.8]; PAS fold [PF08447.14, score=64.5]; PAS fold [PF00989.27, score=54.6]; PAS fold [PF08448.12, score=35.4]; PAS domain [PF13426.9, score=24.5]; Helix-loop-helix DNA-binding domain [PF00010.28, score=20.5]} {Human: ENSG00000112246, SIM1, SIM bHLH transcription factor 1, [Score=295, Expect=1e-89]; ENSG00000159263, SIM2, SIM bHLH transcription factor 2, [Score=289, Expect=2e-88]} {Mouse: ENSMUSG00000062713, Sim2, single-minded family bHLH transcription factor 2, [Score=297, Expect=9e-95]; ENSMUSG00000019913, Sim1, single-minded family bHLH transcription factor 1, [Score=294, Expect=2e-89]} {Dmel: FBgn0004666, sim, single-minded, [Score=251, Expect=3e-74]} {Celegans: WBGene00011327, hlh-34, Helix-loop-helix 34, [Score=102, Expect=1e-23]} {Smed: dd_Smed_v6_17731_0_1, dd_Smed_v6_17731_0_1, [Score=279, Expect=5e-85]} {RNA1509_48399} {RNA1310_29071, RNA1509_48399} {RNA1509_48399, RNA815_28494}
7.	MligTC455_25772	151	3.15	Mlig455_067364	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_067364 {REF} {Length: 3815} {RNA1509_5822} {RNA1310_3594} {RNA815_4411}
8.	MligTC455_13570	475	9.89	Mlig455_052425	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_052425 {REF} {Length: 1052} {RNA1310_135712}
9.	MligTC455_14931	126	2.62	Mlig455_017837	Neo: Int S/G2/M Age: -	ZFAND1	0.956	-	-	-	-	0.956	-	Mlig455_017837 {REF} {Length: 1432} {TRANSSPLICED} {Pfam: AN1-like Zinc finger [PF01428.18, score=50.5]} {Human: ENSG00000104231, ZFAND1, zinc finger AN1-type containing 1, [RH, Score=120, Expect=8e-32]} {Mouse: ENSMUSG00000039795, Zfand1, zinc finger, AN1-type domain 1, [RH, Score=103, Expect=1e-25]} {Dmel: FBgn0031535, CG12795, [Score=64.7, Expect=8e-12]} {Celegans: WBGene00000097, aip-1, Arsenite Inducible Protein, [Score=64.7, Expect=3e-12]} {Smed: dd_Smed_v6_12611_0_1, dd_Smed_v6_12611_0_1, [RH, Score=79.7, Expect=2e-17]} {RNA1509_43206} {RNA1310_39084} {RNA815_24443}
10.	MligTC455_24538	18	0.39	Mlig455_037027	Neo: - Age: logFC(26M/2M)=1.305	P4HB	0.951	-	-	-	-	0.951	-	Mlig455_037027 {REF} {Length: 2948} {Pfam: Thioredoxin [PF00085.22, score=150.2]; Thioredoxin-like domain [PF13848.8, score=137.4]; Thioredoxin-like [PF13905.8, score=34.9]; OST3 / OST6 family, transporter family [PF04756.15, score=29.1]; ERp29, N-terminal domain [PF07912.15, score=28.9]; Thioredoxin-like [PF13899.8, score=28.1]; Thioredoxin-like domain [PF13098.8, score=26.4]; Calsequestrin [PF01216.19, score=24.1]} {Human: ENSG00000185624, P4HB, prolyl 4-hydroxylase subunit beta, [Score=414, Expect=2e-139]} {Mouse: ENSMUSG00000025130, P4hb, prolyl 4-hydroxylase, beta polypeptide, [Score=414, Expect=2e-139]} {Dmel: FBgn0014002, Pdi, Protein disulfide isomerase, [Score=382, Expect=3e-127]} {Celegans: WBGene00003963, pdi-2, Protein disulfide-isomerase 2, [Score=400, Expect=2e-134]} {Smed: dd_Smed_v6_250_0_1, dd_Smed_v6_250_0_1, [Score=416, Expect=7e-141]} {RNA1509_24304} {RNA1310_9678, RNA1509_24304} {RNA1509_24304, RNA815_5042}

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