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Results for MligTC455_04184

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_04184 48 0.99 Mlig455_041535

Neo: -

Age: -

 SLIT1 Mlig455_041535 {REF} {Length: 1229} {Pfam: Leucine rich repeat [PF13855.8, score=122.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=65.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=32.8]; Leucine rich repeat N-terminal domain [PF01462.20, score=32.3]; Leucine Rich Repeat [PF00560.35, score=26.2]; Leucine rich repeat C-terminal domain [PF01463.26, score=20.2]; Leucine-rich repeat [PF14580.8, score=18.6]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [RH, Score=261, Expect=7e-80]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=266, Expect=2e-81]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=262, Expect=3e-78]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=258, Expect=1e-76]} {Dmel: FBgn0264089, sli, slit, [Score=228, Expect=1e-66]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=177, Expect=8e-49]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=175, Expect=2e-48]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}

Cumulative graph for MligTC455_04184

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 1.274 1.383 1.00000 1.00000
RegionR2 -1.182 1.383 0.99993 1.00000
RegionR3 -0.48 1.383 1.00000 1.00000
RegionR4 0.951 1.383 1.00000 1.00000
RegionR5 -0.15 1.383 1.00000 1.00000
RegionR6 -0.638 1.383 1.00000 1.00000
RegionR7 -0.235 1.383 1.00000 1.00000
RegionR8 0.459 1.383 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 2.995 1.383 0.51267 1.00000
RegenerationR2 4.233 1.383 0.35333 0.78373
RegenerationR3 3.601 1.383 0.46021 0.83763
RegenerationR4 2.65 1.383 0.48248 0.85997
RegenerationR5 3.487 1.383 0.52931 0.87462
RegenerationR6 3.957 1.383 0.50573 0.81045
RegenerationBL 2.07 1.383 0.76680 1.00000
RegenerationTP -1.02 1.383 1.00000 1.00000


Genes with expression patterns similar to MligTC455_04184

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_04184 48 0.99 Mlig455_041535

Neo: -

Age: -

 SLIT1 3 - - - 1.000 1.000 1.000 Mlig455_041535 {REF} {Length: 1229} {Pfam: Leucine rich repeat [PF13855.8, score=122.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=65.7]; BspA type Leucine rich repeat region (6 copies) [PF13306.8, score=32.8]; Leucine rich repeat N-terminal domain [PF01462.20, score=32.3]; Leucine Rich Repeat [PF00560.35, score=26.2]; Leucine rich repeat C-terminal domain [PF01463.26, score=20.2]; Leucine-rich repeat [PF14580.8, score=18.6]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [RH, Score=261, Expect=7e-80]} {Mouse: ENSMUSG00000031558, Slit2, slit guidance ligand 2, [Score=266, Expect=2e-81]; ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=262, Expect=3e-78]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=258, Expect=1e-76]} {Dmel: FBgn0264089, sli, slit, [Score=228, Expect=1e-66]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=177, Expect=8e-49]} {Smed: dd_Smed_v6_12111_0_1, dd_Smed_v6_12111_0_1, [Score=175, Expect=2e-48]} {RNA1509_4387} {RNA1310_1314.1} {RNA815_367}
2. MligTC455_06925 3 0.07 Mlig455_039136

Neo: -

Age: -

 C11orf54 1 - - - - - 1.000 Mlig455_039136 {REF} {Length: 2662} {Pfam: Domain of Unknown Function (DUF1907) [PF08925.13, score=81.3]} {Human: ENSG00000182919, C11orf54, chromosome 11 open reading frame 54, [Score=76.6, Expect=4e-16]} {Mouse: ENSMUSG00000031938, 4931406C07Rik, RIKEN cDNA 4931406C07 gene, [Score=77.0, Expect=2e-16]} {Dmel: FBgn0035189, CG9119, [Score=50.8, Expect=2e-07]} {Celegans: WBGene00016046, C24B5.4, [Score=55.1, Expect=5e-09]} {RNA1509_56223} {RNA1310_31002} {RNA815_49766}
3. MligTC455_02424 1 0.03 Mlig455_020846

Neo: -

Age: -

 0.996 - - - - - 0.996 Mlig455_020846 {REF} {Length: 395} {NoTransDecoderORF} {RNA1310_83381} {RNA815_43376}
4. MligTC455_25332 7 0.15 Mlig455_005662, Mlig455_013232, Mlig455_015978, Mlig455_015998, Mlig455_019840, Mlig455_022494, Mlig455_023058, Mlig455_037754, Mlig455_043161, Mlig455_046594, Mlig455_046595, Mlig455_057957, Mlig455_060352, Mlig455_064520

Neo: -

Age: -

 0.989 - - - - - 0.989

Mlig455_005662 {REF} {Length: 1486} {RNA1509_20249} {RNA1310_60971} {RNA815_41688}

Mlig455_013232 {REF} {Length: 561} {Pfam: DDE superfamily endonuclease [PF13358.8, score=49.3]} {Smed: dd_Smed_v6_15852_0_1, dd_Smed_v6_15852_0_1, [Score=85.1, Expect=1e-19]} {RNA1509_52131} {RNA1310_50608} {RNA815_47252}

Mlig455_015978 {REF} {Length: 885} {Pfam: DDE superfamily endonuclease [PF13358.8, score=45.7]} {Smed: dd_Smed_v6_15852_0_1, dd_Smed_v6_15852_0_1, [Score=94.0, Expect=3e-22]} {RNA1509_52131} {RNA1310_50608} {RNA815_47252}

Mlig455_015998 {REF} {Length: 1038} {Pfam: DDE superfamily endonuclease [PF13358.8, score=35.7]; Homeodomain-like domain [PF13565.8, score=28.1]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=117, Expect=5e-30]} {RNA1509_52131} {RNA1310_46627} {RNA815_47252}

Mlig455_019840 {REF} {Length: 1987} {Pfam: DDE superfamily endonuclease [PF13358.8, score=34.8]; Homeodomain-like domain [PF13565.8, score=30.3]; Homeodomain-like domain [PF13384.8, score=22.5]; 'Paired box' domain [PF00292.20, score=18.6]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=139, Expect=2e-38]} {RNA1509_40708} {RNA1310_46627} {RNA815_14744.1}

Mlig455_022494 {REF} {Length: 736} {Pfam: Homeodomain-like domain [PF13565.8, score=29.6]; DDE superfamily endonuclease [PF13358.8, score=29.5]; Homeodomain-like domain [PF13384.8, score=22.9]; 'Paired box' domain [PF00292.20, score=19.1]; Helix-turn-helix domain [PF13518.8, score=18.9]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=124, Expect=1e-33]} {RNA1509_20249} {RNA1310_46627} {RNA815_54401}

Mlig455_023058 {REF} {Length: 1491} {Pfam: DDE superfamily endonuclease [PF13358.8, score=48.5]} {Smed: dd_Smed_v6_15852_0_1, dd_Smed_v6_15852_0_1, [Score=97.4, Expect=2e-23]} {RNA1509_20249} {RNA1310_46627} {RNA815_41688}

Mlig455_037754 {REF} {Length: 671} {Pfam: DDE superfamily endonuclease [PF13358.8, score=46.0]} {Smed: dd_Smed_v6_15852_0_1, dd_Smed_v6_15852_0_1, [Score=83.2, Expect=9e-19]} {RNA1509_52131} {RNA1310_50608} {RNA815_47252}

Mlig455_043161 {REF} {Length: 401} {Pfam: DDE superfamily endonuclease [PF13358.8, score=49.3]} {Smed: dd_Smed_v6_15852_0_1, dd_Smed_v6_15852_0_1, [Score=85.1, Expect=1e-19]} {RNA1509_52131} {RNA1310_50608} {RNA815_47252}

Mlig455_046594 {REF} {Length: 339} {Pfam: Homeodomain-like domain [PF13384.8, score=28.0]; Helix-turn-helix domain [PF13518.8, score=20.6]; Helix-turn-helix domain [PF13936.8, score=18.8]} {Smed: dd_Smed_v6_5882_0_3, dd_Smed_v6_5882_0_3, [RH, Score=47.8, Expect=2e-09]} {RNA1509_20249} {RNA1310_59950} {RNA815_32204}

Mlig455_046595 {REF} {Length: 226} {Pfam: DDE superfamily endonuclease [PF13358.8, score=35.7]; Homeodomain-like domain [PF13565.8, score=28.1]} {Smed: dd_Smed_v6_5882_0_1, dd_Smed_v6_5882_0_1, [Score=117, Expect=5e-30]} {RNA1509_52131} {RNA1310_50608} {RNA815_41688}

Mlig455_057957 {REF} {Length: 604} {Smed: dd_Smed_v6_5882_0_3, dd_Smed_v6_5882_0_3, [Score=43.5, Expect=1e-06]} {RNA1509_52131} {RNA1310_50608} {RNA815_41688}

Mlig455_060352 {REF} {Length: 960} {TRANSSPLICED} {Smed: dd_Smed_v6_5882_0_3, dd_Smed_v6_5882_0_3, [Score=43.5, Expect=2e-06]} {RNA1509_20249} {RNA1310_50608} {RNA815_41688}

Mlig455_064520 {REF} {Length: 706} {Pfam: DDE superfamily endonuclease [PF13358.8, score=49.3]} {Smed: dd_Smed_v6_15852_0_1, dd_Smed_v6_15852_0_1, [Score=85.1, Expect=1e-19]} {RNA1509_52131} {RNA1310_50608} {RNA815_47252}
5. MligTC455_07494 2 0.04 Mlig455_020453

Neo: -

Age: -

 0.98 - - - - - 0.980 Mlig455_020453 {REF} {Length: 252} {NoTransDecoderORF}
6. MligTC455_55191 6 0.13 Mlig455_016161

Neo: -

Age: -

 0.974 - - - - - 0.974 Mlig455_016161 {REF} {Length: 239} {NoTransDecoderORF}
7. MligTC455_15694 54 1.13 Mlig455_026426, Mlig455_026456

Neo: -

Age: -

Region-enriched R2: 6.151/0.00957

 SSTR1 0.968 - - - - - 0.968

Mlig455_026426 {REF} {Length: 2191} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=134.4]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=28.7]; Olfactory receptor [PF13853.8, score=26.6]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.2]} {Human: ENSG00000139874, SSTR1, somatostatin receptor 1, [Score=138, Expect=3e-36]} {Mouse: ENSMUSG00000035431, Sstr1, somatostatin receptor 1, [Score=140, Expect=6e-37]; ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=135, Expect=4e-35]} {Dmel: FBgn0036790, AstC-R1, Allatostatin C receptor 1, [Score=124, Expect=5e-31]} {Celegans: WBGene00013782, npr-32, NeuroPeptide Receptor family, [Score=111, Expect=1e-26]} {Smed: dd_Smed_v6_16055_0_1, dd_Smed_v6_16055_0_1, [Score=128, Expect=2e-33]} {RNA1310_38996} {RNA815_25059}

Mlig455_026456 {REF} {Length: 2423} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=134.5]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=28.9]; Olfactory receptor [PF13853.8, score=26.7]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.3]} {Human: ENSG00000139874, SSTR1, somatostatin receptor 1, [Score=138, Expect=3e-36]} {Mouse: ENSMUSG00000035431, Sstr1, somatostatin receptor 1, [Score=140, Expect=5e-37]; ENSMUSG00000037014, Sstr4, somatostatin receptor 4, [Score=135, Expect=3e-35]} {Dmel: FBgn0036790, AstC-R1, Allatostatin C receptor 1, [Score=124, Expect=7e-31]} {Celegans: WBGene00013782, npr-32, NeuroPeptide Receptor family, [Score=110, Expect=2e-26]} {Smed: dd_Smed_v6_16055_0_1, dd_Smed_v6_16055_0_1, [Score=128, Expect=1e-33]} {RNA1310_38996} {RNA815_25059}
8. MligTC455_13643 23 0.48 Mlig455_000634

Neo: Irradiation

Age: Up-Down-Down

 GRIA1 0.963 - - - - - 0.963 Mlig455_000634 {REF} {Length: 2919} {Pfam: Ligand-gated ion channel [PF00060.28, score=135.1]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=114.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=85.1]; Receptor family ligand binding region [PF01094.30, score=71.6]} {Human: ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=461, Expect=2e-148]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=457, Expect=2e-146]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=446, Expect=2e-142]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=444, Expect=2e-141]} {Mouse: ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=460, Expect=9e-148]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=457, Expect=1e-146]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=449, Expect=2e-143]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=444, Expect=3e-141]} {Dmel: FBgn0004619, GluRIA, Glutamate receptor IA, [Score=386, Expect=9e-119]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=346, Expect=3e-104]} {Smed: dd_Smed_v6_17901_0_1, dd_Smed_v6_17901_0_1, [Score=492, Expect=4e-160]} {RNA1310_20413} {RNA815_63661}
9. MligTC455_20324 12 0.24 Mlig455_022502

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_022502 {REF} {Length: 1073} {NoTransDecoderORF} {RNA1310_74877} {RNA815_44278}

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