TomoSeq data search

Data search

Results for MligTC455_04212

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04212

790

16.46

Mlig455_010025, Mlig455_015524, Mlig455_063292

Neo: -

Age: -

Mlig455_010025 {REF} {Length: 1793} {RNA1509_46526} {RNA1310_53029} {RNA815_22092}

Mlig455_015524 {REF} {Length: 1172} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=19.5]; DASH complex subunit Dam1 [PF08653.12, score=19.0]} {Mouse: ENSMUSG00000026090, 2010300C02Rik, RIKEN cDNA 2010300C02 gene, [RH, Score=57.0, Expect=2e-10]} {RNA1310_8230.1}

Mlig455_063292 {REF} {Length: 4730} {TRANSSPLICED} {Celegans: WBGene00015680, egal-1, EGALitarian (Drosophila exonuclease-like) homolog, [Score=48.9, Expect=8e-06]} {Smed: dd_Smed_v6_6723_0_1, dd_Smed_v6_6723_0_1, [Score=333, Expect=3e-105]} {RNA1509_15965} {RNA1310_9660} {RNA815_22092}

Cumulative graph for MligTC455_04212

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.815	4.097	0.06011	0.56280
RegionR2	0.233	4.097	0.62631	0.96837
RegionR3	0.127	4.097	0.75317	1.00000
RegionR4	0.555	4.097	0.24325	0.54118
RegionR5	0.305	4.097	0.43024	0.78991
RegionR6	0.547	4.097	0.16964	0.72641
RegionR7	0.401	4.097	0.40264	1.00000
RegionR8	0.646	4.097	0.21769	0.82381

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.306	4.097	0.25015	0.96639
RegenerationR2	-0.002	4.097	0.99467	1.00000
RegenerationR3	-0.08	4.097	0.84518	0.99623
RegenerationR4	-0.275	4.097	0.51951	0.87894
RegenerationR5	-0.248	4.097	0.51847	0.86868
RegenerationR6	-1.095	4.097	0.01359	0.14371
RegenerationBL	-0.281	4.097	0.55072	0.90760
RegenerationTP	-0.085	4.097	0.85777	1.00000

Genes with expression patterns similar to MligTC455_04212

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04212	790	16.46	Mlig455_010025, Mlig455_015524, Mlig455_063292	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_010025 {REF} {Length: 1793} {RNA1509_46526} {RNA1310_53029} {RNA815_22092} Mlig455_015524 {REF} {Length: 1172} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=19.5]; DASH complex subunit Dam1 [PF08653.12, score=19.0]} {Mouse: ENSMUSG00000026090, 2010300C02Rik, RIKEN cDNA 2010300C02 gene, [RH, Score=57.0, Expect=2e-10]} {RNA1310_8230.1} Mlig455_063292 {REF} {Length: 4730} {TRANSSPLICED} {Celegans: WBGene00015680, egal-1, EGALitarian (Drosophila exonuclease-like) homolog, [Score=48.9, Expect=8e-06]} {Smed: dd_Smed_v6_6723_0_1, dd_Smed_v6_6723_0_1, [Score=333, Expect=3e-105]} {RNA1509_15965} {RNA1310_9660} {RNA815_22092}
2.	MligTC455_04211	553	11.51	Mlig455_054075	Neo: - Age: -		4.871	0.980	0.982	0.987	0.971	0.951	-	Mlig455_054075 {REF} {Length: 3998} {TRANSSPLICED} {Celegans: WBGene00015680, egal-1, EGALitarian (Drosophila exonuclease-like) homolog, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_6723_0_1, dd_Smed_v6_6723_0_1, [Score=332, Expect=3e-105]} {RNA1509_15965} {RNA1310_9660} {RNA815_22092}
3.	MligTC455_13848	348	7.26	Mlig455_036175	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.837	TEKT3	1.721	-	-	-	0.755	-	0.966	Mlig455_036175 {REF} {Length: 2265} {Pfam: Tektin family [PF03148.16, score=371.6]} {Human: ENSG00000125409, TEKT3, tektin 3, [Score=286, Expect=7e-91]} {Mouse: ENSMUSG00000042189, Tekt3, tektin 3, [Score=267, Expect=1e-83]} {Dmel: FBgn0040028, CG17450, [Score=205, Expect=7e-60]} {Smed: dd_Smed_v6_6511_0_1, dd_Smed_v6_6511_0_1, [Score=333, Expect=1e-109]} {RNA1509_15766} {RNA1310_13406, RNA1509_15766} {RNA1509_15766, RNA815_7559}
4.	MligTC455_52467	1114	23.21	Mlig455_064177	Neo: - Age: logFC(26M/2M)=-0.451 Region-enriched R4: 1.522/0.02787	C11orf1	0.973	-	-	-	0.973	-	-	Mlig455_064177 {REF} {Length: 1481} {Pfam: Protein of unknown function (DUF1143) [PF06608.13, score=56.1]} {Human: ENSG00000137720, C11orf1, chromosome 11 open reading frame 1, [RH, Score=53.5, Expect=1e-09]} {Mouse: ENSMUSG00000037971, 1110032A03Rik, RIKEN cDNA 1110032A03 gene, [RH, Score=54.3, Expect=1e-09]} {RNA1509_38176} {RNA1310_51777, RNA1509_38176} {RNA1509_38176, RNA815_26980.1}
5.	MligTC455_49836	1015	21.15	Mlig455_062591	Neo: - Age: -	CACNB2	0.968	-	-	-	0.968	-	-	Mlig455_062591 {REF} {Length: 2543} {Pfam: Guanylate kinase [PF00625.23, score=145.5]; Voltage gated calcium channel subunit beta domain 4Aa N terminal [PF12052.10, score=24.8]} {Human: ENSG00000165995, CACNB2, calcium voltage-gated channel auxiliary subunit beta 2, [RH, Score=474, Expect=8e-161]; ENSG00000067191, CACNB1, calcium voltage-gated channel auxiliary subunit beta 1, [RH, Score=456, Expect=1e-155]; ENSG00000182389, CACNB4, calcium voltage-gated channel auxiliary subunit beta 4, [RH, Score=455, Expect=1e-155]} {Mouse: ENSMUSG00000057914, Cacnb2, calcium channel, voltage-dependent, beta 2 subunit, [RH, Score=468, Expect=6e-159]; ENSMUSG00000020882, Cacnb1, calcium channel, voltage-dependent, beta 1 subunit, [RH, Score=455, Expect=2e-155]; ENSMUSG00000017412, Cacnb4, calcium channel, voltage-dependent, beta 4 subunit, [RH, Score=453, Expect=6e-155]} {Dmel: FBgn0259822, Ca-beta, Ca2+-channel-protein-beta-subunit, [RH, Score=495, Expect=4e-167]} {Celegans: WBGene00000368, ccb-1, Calcium Channel, Beta subunit, [RH, Score=439, Expect=2e-149]} {Smed: dd_Smed_v6_9267_0_1, dd_Smed_v6_9267_0_1, [RH, Score=476, Expect=2e-163]} {RNA1509_12516, RNA1509_27369} {RNA1310_9882.1, RNA1509_12516, RNA1509_27369} {RNA1509_12516, RNA1509_27369, RNA815_12684}
6.	MligTC455_53820	155	3.23	Mlig455_065353	Neo: Irradiation Age: Down-Up-Down, logFC(26M/2M)=1.766		0.966	-	-	-	-	-	0.966	Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1}
7.	MligTC455_45236	58	1.22	Mlig455_015834	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_015834 {REF} {Length: 3404} {RNA1509_56313} {RNA1310_32456, RNA1509_56313} {RNA1509_56313, RNA815_14695.1}
8.	MligTC455_45449	816	16.99	Mlig455_019656, Mlig455_048058, Mlig455_048077	Neo: - Age: - Region-enriched R5: 1.162/0.00391		0.958	-	-	-	-	-	0.958	Mlig455_019656 {REF} {Length: 1031} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=21.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048058 {REF} {Length: 918} {TRANSSPLICED} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048077 {REF} {Length: 950} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=77.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=105, Expect=9e-29]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210}
9.	MligTC455_28725	281	5.84	Mlig455_057062	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.361 Region-enriched R2: 3.359/0.00096	ANK1	0.956	-	-	-	0.956	-	-	Mlig455_057062 {REF} {Length: 9594} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=657.0]; Ankyrin repeats (many copies) [PF13637.8, score=564.6]; Ankyrin repeats (many copies) [PF13857.8, score=451.3]; Ankyrin repeat [PF13606.8, score=367.3]; Ankyrin repeat [PF00023.32, score=184.4]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=148, Expect=9e-35]; ENSG00000145362, ANK2, ankyrin 2, [Score=147, Expect=1e-34]; ENSG00000151150, ANK3, ankyrin 3, [Score=146, Expect=4e-34]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=149, Expect=1e-35]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=149, Expect=4e-35]; ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=145, Expect=7e-34]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=144, Expect=8e-34]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=149, Expect=5e-35]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=135, Expect=2e-31]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=172, Expect=3e-43]} {RNA1509_11517} {RNA1310_203} {RNA815_6981}
10.	MligTC455_29019	2780	57.92	Mlig455_047569	Neo: - Age: - Regeneration-enriched R3: 3.253 Regeneration-enriched TP: 3.198 Regeneration-enriched BL: 3.042 Regeneration-enriched R2: 2.854		0.954	-	-	-	-	-	0.954	Mlig455_047569 {REF} {Length: 4815} {TRANSSPLICED} {RNA1509_45988} {RNA1310_79684} {RNA815_44017}
11.	MligTC455_40431	1617	33.69	Mlig455_001071, Mlig455_005584	Neo: Irradiation Age: logFC(26M/2M)=0.290 Region-enriched R5: 1.292/0.00002	HDDC3	0.951	-	-	-	0.951	-	-	Mlig455_001071 {REF} {Length: 1801} {TRANSSPLICED} {Pfam: HD domain [PF13328.8, score=65.4]; HD domain [PF01966.24, score=21.8]} {Human: ENSG00000184508, HDDC3, HD domain containing 3, [RH, Score=220, Expect=4e-73]} {Mouse: ENSMUSG00000030532, Hddc3, HD domain containing 3, [RH, Score=221, Expect=9e-74]} {Dmel: FBgn0039650, Mesh1, Metazoan SpoT homolog-1, [RH, Score=187, Expect=2e-60]} {Celegans: WBGene00014148, ZK909.3, [RH, Score=182, Expect=8e-58]} {Smed: dd_Smed_v6_15359_0_1, dd_Smed_v6_15359_0_1, [RH, Score=202, Expect=1e-66]} {RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471} {RNA1310_24812, RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471} {RNA1509_18891, RNA1509_19707, RNA1509_21578, RNA1509_44471, RNA815_10702.1} Mlig455_005584 {REF} {Length: 1905} {TRANSSPLICED} {Pfam: HD domain [PF13328.8, score=64.9]; HD domain [PF01966.24, score=21.6]} {Human: ENSG00000184508, HDDC3, HD domain containing 3, [RH, Score=222, Expect=5e-74]} {Mouse: ENSMUSG00000030532, Hddc3, HD domain containing 3, [RH, Score=223, Expect=2e-74]} {Dmel: FBgn0039650, Mesh1, Metazoan SpoT homolog-1, [RH, Score=188, Expect=6e-61]} {Celegans: WBGene00014148, ZK909.3, [RH, Score=183, Expect=2e-58]} {Smed: dd_Smed_v6_15359_0_1, dd_Smed_v6_15359_0_1, [RH, Score=202, Expect=8e-67]} {RNA1509_19707} {RNA1310_45800} {RNA815_14376}
12.	MligTC455_16998	650	13.54	Mlig455_061182	Neo: - Age: - Region-enriched R4: 2.023/0.00002	CALM3	0.95	-	-	-	0.950	-	-	Mlig455_061182 {REF} {Length: 1000} {Pfam: EF hand [PF00036.34, score=83.9]; EF-hand domain pair [PF13499.8, score=82.3]; EF-hand domain [PF13405.8, score=70.8]; EF-hand domain pair [PF13833.8, score=64.9]; EF hand [PF13202.8, score=56.3]; EF-hand domain [PF14658.8, score=38.7]; Secreted protein acidic and rich in cysteine Ca binding region [PF10591.11, score=26.3]; OST-HTH/LOTUS domain [PF12872.9, score=18.4]} {Human: ENSG00000160014, CALM3, calmodulin 3, [Score=163, Expect=8e-52]; ENSG00000198668, CALM1, calmodulin 1, [Score=163, Expect=7e-52]; ENSG00000143933, CALM2, calmodulin 2, [Score=163, Expect=8e-52]} {Mouse: ENSMUSG00000036438, Calm2, calmodulin 2, [Score=163, Expect=5e-52]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=163, Expect=5e-52]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=163, Expect=5e-52]; ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=161, Expect=3e-51]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=162, Expect=2e-51]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=162, Expect=1e-51]} {Smed: dd_Smed_v6_255_0_1, dd_Smed_v6_255_0_1, [Score=162, Expect=1e-51]} {RNA1509_34192} {RNA1310_44408} {RNA815_20757}
13.	MligTC455_41575	418	8.71	Mlig455_012538	Neo: - Age: Down-Up-Down		0.95	-	-	-	-	-	0.950	Mlig455_012538 {REF} {Length: 1233} {Pfam: EF hand [PF00036.34, score=47.8]; EF-hand domain pair [PF13499.8, score=46.4]; EF-hand domain [PF13405.8, score=44.3]; EF-hand domain pair [PF13833.8, score=26.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.4]; EF hand [PF13202.8, score=19.8]} {Dmel: FBgn0036926, CG7646, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=42.7, Expect=1e-05]} {RNA1509_17148} {RNA1310_42976, RNA1509_17148} {RNA1509_17148, RNA815_19784.1}

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