Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_53820 | 155 | 3.23 | Mlig455_065353 | Neo: Irradiation |
Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -4.265 | 2.083 | 0.42038 | 1.00000 | |
RegionR2 | 2.295 | 2.083 | 0.03527 | 0.21600 | |
RegionR3 | 0.493 | 2.083 | 0.65735 | 1.00000 | |
RegionR4 | 0.25 | 2.083 | 0.76043 | 1.00000 | |
RegionR5 | 0.774 | 2.083 | 0.45401 | 0.81595 | |
RegionR6 | -0.433 | 2.083 | 0.95689 | 1.00000 | |
RegionR7 | 0.458 | 2.083 | 0.74223 | 1.00000 | |
RegionR8 | 0.428 | 2.083 | 0.78829 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 6.121 | 2.083 | 0.19752 | 0.93684 | |
RegenerationR2 | 0.689 | 2.083 | 0.23109 | 0.67844 | |
RegenerationR3 | 1.204 | 2.083 | 0.15841 | 0.59025 | |
RegenerationR4 | 1.056 | 2.083 | 0.16980 | 0.60650 | |
RegenerationR5 | 1.084 | 2.083 | 0.11727 | 0.51474 | |
RegenerationR6 | 2.324 | 2.083 | 0.01595 | 0.15609 | |
RegenerationBL | 1.338 | 2.083 | 0.26775 | 0.62685 | |
RegenerationTP | 2.063 | 2.083 | 0.08802 | 0.46776 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_53820 | 155 | 3.23 | Mlig455_065353 | Neo: Irradiation |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_065353 {REF} {Length: 2764} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=37.6]; WSC domain [PF01822.21, score=35.0]} {RNA1509_40708} {RNA1310_26224} {RNA815_14744.1} | |
2. | MligTC455_53819 | 234 | 4.88 | Mlig455_029142, Mlig455_032108 | Neo: - Age: - |
2.71 | 0.997 | - | - | 0.833 | 0.880 | - | Mlig455_029142 {REF} {Length: 262} {NoTransDecoderORF} {RNA1310_91707} {RNA815_47119} Mlig455_032108 {REF} {Length: 1704} {NoTransDecoderORF} {RNA1509_22316} {RNA1310_88113} {RNA815_47119} |
|
3. | MligTC455_47442 | 255 | 5.31 | Mlig455_001051 | Neo: - Age: - |
2.529 | - | 0.727 | 0.823 | - | - | 0.979 | Mlig455_001051 {REF} {Length: 342} {TRANSSPLICED} {RNA1509_13727} {RNA1310_23632} {RNA815_13707} | |
4. | MligTC455_30572 | 88 | 1.82 | Mlig455_009374, Mlig455_026650 | Neo: - Age: Down-Down-Down |
NYNRIN | 1.785 | - | - | 0.828 | - | - | 0.957 | Mlig455_009374 {REF} {Length: 592} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.8]; Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=46.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=3e-73]} {RNA1509_8906} {RNA1310_1712.2} {RNA815_474.1} Mlig455_026650 {REF} {Length: 3906} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=103.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=57.8]; Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=46.3]; gag-polyprotein putative aspartyl protease [PF13975.8, score=22.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=71.2, Expect=8e-12]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=262, Expect=3e-73]} {RNA1509_8906} {RNA1310_1712.3} {RNA815_474.1} |
5. | MligTC455_26269 | 294 | 6.12 | Mlig455_056660 | Neo: - Age: Up-Up-Down |
1.776 | - | - | - | - | 0.804 | 0.972 | Mlig455_056660 {REF} {Length: 6926} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=24.3]} {RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1310_5450.1, RNA1509_47204, RNA1509_52342, RNA1509_55209} {RNA1509_47204, RNA1509_52342, RNA1509_55209, RNA815_7136.2} | |
6. | MligTC455_53363 | 477 | 9.94 | Mlig455_042368, Mlig455_069314 | Neo: - Age: Down-Down-Up Regeneration-enriched BL: 3.828 |
1.774 | - | - | - | - | 0.804 | 0.970 | Mlig455_042368 {REF} {Length: 667} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=50.7]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870} Mlig455_069314 {REF} {Length: 3392} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=86.3]; Endonuclease-reverse transcriptase [PF14529.8, score=45.3]} {Smed: dd_Smed_v6_16441_0_1, dd_Smed_v6_16441_0_1, [Score=71.6, Expect=8e-13]} {RNA1509_35522} {RNA1310_1411.2} {RNA815_8870} |
|
7. | MligTC455_29003 | 223 | 4.64 | Mlig455_066978 | Neo: - Age: - |
1.753 | - | - | - | - | 0.791 | 0.962 | Mlig455_066978 {REF} {Length: 5329} {RNA1509_29353} {RNA1310_4523} {RNA815_17419} | |
8. | MligTC455_35001 | 1233 | 25.68 | Mlig455_049852, Mlig455_063818, Mlig455_069989 | Neo: - |
NOTCH1, SVEP1 | 1.721 | - | - | 0.764 | - | 0.957 | - | Mlig455_049852 {REF} {Length: 1497} {Pfam: EGF-like domain [PF00008.29, score=23.5]; EGF-like domain [PF07974.15, score=19.5]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=53.9, Expect=1e-07]; ENSG00000074181, NOTCH3, notch 3, [Score=53.1, Expect=2e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=56.6, Expect=8e-09]} {RNA1509_48097} {RNA1310_28757} {RNA815_6559} Mlig455_063818 {REF} {Length: 1417} {Pfam: EGF-like domain [PF00008.29, score=23.6]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=52.4, Expect=6e-07]} {Mouse: ENSMUSG00000038146, Notch3, notch 3, [Score=48.9, Expect=5e-06]} {RNA1509_48097} {RNA1310_28757} {RNA815_6559} Mlig455_069989 {REF} {Length: 2965} {Pfam: EGF-like domain [PF00008.29, score=24.4]; EGF-like domain [PF07974.15, score=21.5]} {Human: ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=54.3, Expect=1e-07]} {Mouse: ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=56.2, Expect=2e-08]} {Celegans: WBGene00013486, egas-1, EGF plus ASC domain ion channel, [Score=46.2, Expect=1e-05]} {RNA1509_48097} {RNA1310_15482} {RNA815_16285} |
9. | MligTC455_45449 | 816 | 16.99 | Mlig455_019656, Mlig455_048058, Mlig455_048077 | Neo: - Age: - Region-enriched R5: 1.162/0.00391 |
1.717 | - | - | - | 0.752 | - | 0.965 | Mlig455_019656 {REF} {Length: 1031} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=21.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=42.7, Expect=3e-06]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048058 {REF} {Length: 918} {TRANSSPLICED} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} Mlig455_048077 {REF} {Length: 950} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=77.4]} {Smed: dd_Smed_v6_9938_0_1, dd_Smed_v6_9938_0_1, [Score=105, Expect=9e-29]} {RNA1509_37985} {RNA1310_37034.1} {RNA815_18210} |
|
10. | MligTC455_41101 | 260 | 5.41 | Mlig455_034223 | Neo: - Age: - |
JUN | 1.683 | - | - | - | - | 0.720 | 0.963 | Mlig455_034223 {REF} {Length: 1997} {Pfam: bZIP transcription factor [PF00170.23, score=33.8]; bZIP Maf transcription factor [PF03131.19, score=24.9]; Basic region leucine zipper [PF07716.17, score=22.5]} {Human: ENSG00000177606, JUN, Jun proto-oncogene, AP-1 transcription factor subunit, [Score=53.9, Expect=4e-08]; ENSG00000130522, JUND, JunD proto-oncogene, AP-1 transcription factor subunit, [Score=53.5, Expect=5e-08]} {Mouse: ENSMUSG00000052684, Jun, jun proto-oncogene, [Score=53.9, Expect=2e-08]; ENSMUSG00000071076, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]; ENSMUSG00000110974, Jund, jun D proto-oncogene, [Score=53.1, Expect=5e-08]} {Dmel: FBgn0001291, Jra, Jun-related antigen, [Score=57.0, Expect=1e-09]} {Celegans: WBGene00012005, jun-1, Transcription factor jun-1, [Score=47.0, Expect=2e-06]} {Smed: dd_Smed_v6_5875_0_1, dd_Smed_v6_5875_0_1, [Score=49.7, Expect=2e-07]} {RNA1509_19720} {RNA1310_26812} {RNA815_12638} |
11. | MligTC455_13282 | 95 | 1.99 | Mlig455_021294 | Neo: - Age: Down-Up-Down |
1.682 | 0.956 | - | 0.726 | - | - | - | Mlig455_021294 {REF} {Length: 840} {NoTransDecoderORF} {RNA1310_63724} {RNA815_38056} | |
12. | MligTC455_02232 | 152 | 3.17 | Mlig455_002887 | Neo: - Age: - |
1.67 | - | - | - | - | 0.705 | 0.965 | Mlig455_002887 {REF} {Length: 1354} {Dmel: FBgn0035253, CG7971, [Score=47.8, Expect=6e-06]} {RNA1310_125762} | |
13. | MligTC455_23139 | 144 | 2.99 | Mlig455_035186 | Neo: - Age: - |
1.661 | - | - | - | 0.707 | - | 0.954 | Mlig455_035186 {REF} {Length: 416} {NoTransDecoderORF} {RNA1509_23857} {RNA1310_64187} | |
14. | MligTC455_34224 | 312 | 6.5 | Mlig455_015246, Mlig455_056676, Mlig455_070843 | Neo: - Age: - |
1.657 | - | - | - | - | 0.704 | 0.953 | Mlig455_015246 {REF} {Length: 251} {RNA1509_46811} {RNA1310_82283} {RNA815_19376} Mlig455_056676 {REF} {Length: 366} {RNA1509_30941} {RNA1310_82283} {RNA815_19376} Mlig455_070843 {REF} {Length: 312} {RNA1509_30941} {RNA1310_82283} {RNA815_19376} |
|
15. | MligTC455_27848 | 604 | 12.58 | Mlig455_019526, Mlig455_036505 | Neo: - Age: - Regeneration-upregulated BL: 4.388 Regeneration-enriched BL: 4.388 |
0.983 | - | - | - | - | - | 0.983 | Mlig455_019526 {REF} {Length: 1253} {Pfam: Zinc knuckle [PF00098.25, score=21.9]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} Mlig455_036505 {REF} {Length: 2621} {TRANSSPLICED} {Pfam: Zinc knuckle [PF00098.25, score=21.6]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} |
|
16. | MligTC455_09236 | 361 | 7.53 | Mlig455_069872 | Neo: - Age: - |
0.979 | - | - | - | - | - | 0.979 | Mlig455_069872 {REF} {Length: 971} {NoTransDecoderORF} {RNA1509_56890} {RNA1310_8409.1} {RNA815_29944} | |
17. | MligTC455_13848 | 348 | 7.26 | Mlig455_036175 | Neo: - |
TEKT3 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_036175 {REF} {Length: 2265} {Pfam: Tektin family [PF03148.16, score=371.6]} {Human: ENSG00000125409, TEKT3, tektin 3, [Score=286, Expect=7e-91]} {Mouse: ENSMUSG00000042189, Tekt3, tektin 3, [Score=267, Expect=1e-83]} {Dmel: FBgn0040028, CG17450, [Score=205, Expect=7e-60]} {Smed: dd_Smed_v6_6511_0_1, dd_Smed_v6_6511_0_1, [Score=333, Expect=1e-109]} {RNA1509_15766} {RNA1310_13406, RNA1509_15766} {RNA1509_15766, RNA815_7559} |
18. | MligTC455_21372 | 348 | 7.25 | Mlig455_020792 | Neo: - Age: - |
FBXL20 | 0.975 | - | - | - | - | - | 0.975 | Mlig455_020792 {REF} {Length: 2340} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=50.4]; F-box domain [PF00646.35, score=36.8]} {Human: ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=67.4, Expect=2e-11]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=68.2, Expect=9e-12]} {RNA1509_13719} {RNA1310_18584} {RNA815_19408} |
19. | MligTC455_44439 | 69 | 1.44 | Mlig455_038143 | Neo: - Age: - |
0.97 | - | - | - | - | - | 0.970 | Mlig455_038143 {REF} {Length: 2756} {Pfam: RNase H [PF00075.26, score=36.9]} {RNA1509_18097} {RNA1310_30023} {RNA815_11171.1} | |
20. | MligTC455_29019 | 2780 | 57.92 | Mlig455_047569 | Neo: - Age: - Regeneration-enriched R3: 3.253 |
0.968 | - | - | - | - | - | 0.968 | Mlig455_047569 {REF} {Length: 4815} {TRANSSPLICED} {RNA1509_45988} {RNA1310_79684} {RNA815_44017} | |
21. | MligTC455_04212 | 790 | 16.46 | Mlig455_010025, Mlig455_015524, Mlig455_063292 | Neo: - Age: - |
0.966 | - | - | - | - | - | 0.966 | Mlig455_010025 {REF} {Length: 1793} {RNA1509_46526} {RNA1310_53029} {RNA815_22092} Mlig455_015524 {REF} {Length: 1172} {Pfam: Bacterial protein of unknown function (DUF948) [PF06103.13, score=19.5]; DASH complex subunit Dam1 [PF08653.12, score=19.0]} {Mouse: ENSMUSG00000026090, 2010300C02Rik, RIKEN cDNA 2010300C02 gene, [RH, Score=57.0, Expect=2e-10]} {RNA1310_8230.1} Mlig455_063292 {REF} {Length: 4730} {TRANSSPLICED} {Celegans: WBGene00015680, egal-1, EGALitarian (Drosophila exonuclease-like) homolog, [Score=48.9, Expect=8e-06]} {Smed: dd_Smed_v6_6723_0_1, dd_Smed_v6_6723_0_1, [Score=333, Expect=3e-105]} {RNA1509_15965} {RNA1310_9660} {RNA815_22092} |
|
22. | MligTC455_27843 | 317 | 6.6 | Mlig455_054197 | Neo: - Age: - Regeneration-enriched R6: 4.237 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_054197 {REF} {Length: 1106} {Pfam: Zinc knuckle [PF00098.25, score=22.3]} {RNA1509_40897} {RNA1310_131.1} {RNA815_52.1} | |
23. | MligTC455_44923 | 1476 | 30.74 | Mlig455_042352, Mlig455_047121 | Neo: - Age: Down-Up-Up |
WDR34 | 0.965 | - | - | - | - | - | 0.965 | Mlig455_042352 {REF} {Length: 2248} {TRANSSPLICED} {RNA1509_10795} {RNA1310_10379} {RNA815_12215.1} Mlig455_047121 {REF} {Length: 2263} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=25.1]} {Human: ENSG00000119333, WDR34, WD repeat domain 34, [Score=124, Expect=1e-29]} {Mouse: ENSMUSG00000039715, Wdr34, WD repeat domain 34, [Score=119, Expect=3e-28]} {Smed: dd_Smed_v6_14428_0_1, dd_Smed_v6_14428_0_1, [RH, Score=169, Expect=1e-45]} {RNA1509_10795} {RNA1310_10379, RNA1509_10795} {RNA1509_10795, RNA815_12215.1} |
24. | MligTC455_29016 | 36522 | 760.88 | Mlig455_005202 | Neo: - Age: - Regeneration-enriched R1: 3.026 |
0.964 | - | - | - | - | - | 0.964 | Mlig455_005202 {REF} {Length: 920} {TRANSSPLICED} {RNA1509_22244} {RNA1310_14527} {RNA815_7836.1} | |
25. | MligTC455_41575 | 418 | 8.71 | Mlig455_012538 | Neo: - Age: Down-Up-Down |
0.963 | - | - | - | - | - | 0.963 | Mlig455_012538 {REF} {Length: 1233} {Pfam: EF hand [PF00036.34, score=47.8]; EF-hand domain pair [PF13499.8, score=46.4]; EF-hand domain [PF13405.8, score=44.3]; EF-hand domain pair [PF13833.8, score=26.5]; Cytoskeletal-regulatory complex EF hand [PF12763.9, score=24.4]; EF hand [PF13202.8, score=19.8]} {Dmel: FBgn0036926, CG7646, [Score=48.5, Expect=1e-07]} {Celegans: WBGene00003564, ncs-2, Neuronal calcium sensor 2, [Score=42.7, Expect=1e-05]} {RNA1509_17148} {RNA1310_42976, RNA1509_17148} {RNA1509_17148, RNA815_19784.1} | |
26. | MligTC455_08966 | 67 | 1.4 | Mlig455_050187 | Neo: - Age: - |
0.962 | - | - | - | - | - | 0.962 | Mlig455_050187 {REF} {Length: 682} {NoTransDecoderORF} {RNA1310_138902} | |
27. | MligTC455_32665 | 2179 | 45.39 | Mlig455_007885, Mlig455_007986 | Neo: Germline Age: Up-Down-Down |
CNOT1 | 0.961 | - | - | - | - | - | 0.961 | Mlig455_007885 {REF} {Length: 8750} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.0]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.5]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=54.9]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1030, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1027, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=608, Expect=2e-178]} {RNA1509_14437} {RNA1310_186} {RNA815_2875} Mlig455_007986 {REF} {Length: 8722} {Pfam: CCR4-Not complex component, Not1 [PF04054.17, score=399.9]; CCR4-NOT transcription complex subunit 1 CAF1-binding domain [PF16415.7, score=253.0]; Domain of unknown function (DUF3819) [PF12842.9, score=124.2]; CCR4-NOT transcription complex subunit 1 HEAT repeat [PF16418.7, score=75.2]; CCR4-NOT transcription complex subunit 1 TTP binding domain [PF16417.7, score=55.5]} {Human: ENSG00000125107, CNOT1, CCR4-NOT transcription complex subunit 1, [RH, Score=1027, Expect=0.0]} {Mouse: ENSMUSG00000036550, Cnot1, CCR4-NOT transcription complex, subunit 1, [RH, Score=1025, Expect=0.0]} {Dmel: FBgn0085436, Not1, [Score=653, Expect=0.0]} {Celegans: WBGene00002845, let-711, NTL-1a, [RH, Score=753, Expect=0.0]} {Smed: dd_Smed_v6_2389_0_1, dd_Smed_v6_2389_0_1, [RH, Score=607, Expect=2e-178]} {RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1310_186, RNA1509_1134, RNA1509_14437, RNA1509_44674} {RNA1509_1134, RNA1509_14437, RNA1509_44674, RNA815_2875} |
28. | MligTC455_24520 | 255 | 5.3 | Mlig455_026510 | Neo: - Age: Up-Down-Down |
DNAH10 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_026510 {REF} {Length: 13148} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.2]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=432.5]; Dynein heavy chain, N-terminal region 1 [PF08385.14, score=367.7]; P-loop containing dynein motor region D4 [PF12780.9, score=341.6]; ATP-binding dynein motor region [PF12781.9, score=282.3]; P-loop containing dynein motor region [PF12775.9, score=262.5]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.2]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.5]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=141.6]; Dynein heavy chain C-terminal domain [PF18199.3, score=124.9]; AAA domain (dynein-related subfamily) [PF07728.16, score=91.3]; Dynein heavy chain AAA lid domain [PF17852.3, score=82.7]; AAA+ lid domain [PF17857.3, score=62.7]; AAA domain [PF13401.8, score=38.9]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=35.5]; AAA ATPase domain [PF13191.8, score=26.3]; AAA domain [PF13238.8, score=23.3]; Sigma-54 interaction domain [PF14532.8, score=20.3]; Sigma-54 interaction domain [PF00158.28, score=20.2]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=19.8]} {Human: ENSG00000197653, DNAH10, dynein axonemal heavy chain 10, [RH, Score=5142, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [RH, Score=5333, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3887, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1402, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [Score=4445, Expect=0.0]} {RNA1509_2715} {RNA1310_40.1} {RNA815_20} |
29. | MligTC455_51680 | 163 | 3.4 | Mlig455_021668 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_021668 {REF} {Length: 3625} {RNA1509_33852} {RNA1310_22260.1} {RNA815_27524} | |
30. | MligTC455_14656 | 906 | 18.87 | Mlig455_032710 | Neo: - Age: - |
IKBKE | 0.955 | - | - | - | - | - | 0.955 | Mlig455_032710 {REF} {Length: 3079} {Pfam: Protein kinase domain [PF00069.27, score=132.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=73.7]; Fungal protein kinase [PF17667.3, score=26.0]} {Human: ENSG00000263528, IKBKE, inhibitor of nuclear factor kappa B kinase subunit epsilon, [RH, Score=223, Expect=1e-62]; ENSG00000183735, TBK1, TANK binding kinase 1, [RH, Score=221, Expect=3e-61]} {Mouse: ENSMUSG00000020115, Tbk1, TANK-binding kinase 1, [RH, Score=224, Expect=1e-62]; ENSMUSG00000042349, Ikbke, inhibitor of kappaB kinase epsilon, [RH, Score=223, Expect=2e-62]} {Dmel: FBgn0086657, IKKepsilon, I-kappaB kinase epsilon, [RH, Score=221, Expect=7e-62]} {Celegans: WBGene00012726, Y39G8B.5, [RH, Score=97.1, Expect=1e-20]} {Smed: dd_Smed_v6_1972_0_1, dd_Smed_v6_1972_0_1, [RH, Score=145, Expect=3e-36]} {RNA1509_10714, RNA1509_1184} {RNA1310_5031.1, RNA1509_10714, RNA1509_1184} {RNA1509_10714, RNA1509_1184, RNA815_1466.1} |
31. | MligTC455_23815 | 152 | 3.16 | Mlig455_002411, Mlig455_015380 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_002411 {REF} {Length: 1686} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_17835} {RNA815_29786} Mlig455_015380 {REF} {Length: 1667} {NoTransDecoderORF} {RNA1509_18763} {RNA1310_19291} {RNA815_29786} |
|
32. | MligTC455_52833 | 100 | 2.08 | Mlig455_043991 | Neo: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_043991 {REF} {Length: 3193} {Pfam: Profilin [PF00235.21, score=35.5]} {RNA1509_27250} {RNA1310_34825, RNA1509_27250} {RNA1509_27250, RNA815_20875} | |
33. | MligTC455_53512 | 916 | 19.08 | Mlig455_028726 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.315 Region-enriched R2: 1.504/0.01018 |
IFT172 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_028726 {REF} {Length: 2813} {Pfam: Region in Clathrin and VPS [PF00637.22, score=23.3]; Tetratricopeptide repeat [PF13176.8, score=19.3]} {Human: ENSG00000138002, IFT172, intraflagellar transport 172, [Score=871, Expect=0.0]} {Mouse: ENSMUSG00000038564, Ift172, intraflagellar transport 172, [Score=873, Expect=0.0]} {Dmel: FBgn0035317, Oseg2, Outer segment 2, [Score=546, Expect=5e-173]} {Celegans: WBGene00003883, osm-1, Intraflagellar transport protein osm-1, [Score=517, Expect=2e-162]} {Smed: dd_Smed_v6_10638_0_1, dd_Smed_v6_10638_0_1, [Score=615, Expect=0.0]} {RNA1509_2378} {RNA1310_994} {RNA815_250} |
34. | MligTC455_14414 | 500 | 10.42 | Mlig455_065956 | Neo: - Age: logFC(26M/2M)=2.723 |
SPDEF | 0.954 | 0.954 | - | - | - | - | - | Mlig455_065956 {REF} {Length: 1405} {Pfam: Ets-domain [PF00178.24, score=67.5]} {Human: ENSG00000124664, SPDEF, SAM pointed domain containing ETS transcription factor, [Score=60.5, Expect=1e-09]} {Mouse: ENSMUSG00000024215, Spdef, SAM pointed domain containing ets transcription factor, [Score=59.7, Expect=1e-09]} {Dmel: FBgn0005659, Ets98B, Ets at 98B, [Score=70.1, Expect=6e-13]} {Celegans: WBGene00017687, ets-4, Transcription factor ets-4, [Score=60.5, Expect=5e-10]} {Smed: dd_Smed_v6_6015_0_1, dd_Smed_v6_6015_0_1, [Score=73.6, Expect=2e-14]} {RNA1509_24111} {RNA1310_27105} {RNA815_11814.1} |
35. | MligTC455_27839 | 307 | 6.4 | Mlig455_007792 | Neo: - Age: - |
0.954 | - | - | - | - | - | 0.954 | Mlig455_007792 {REF} {Length: 2271} {Pfam: Protein of unknown function (DUF1759) [PF03564.17, score=23.5]; Zinc knuckle [PF00098.25, score=22.0]} {RNA1509_24163} {RNA1310_131.1} {RNA815_52.1} | |
36. | MligTC455_29919 | 253 | 5.28 | Mlig455_047771 | Neo: - Age: - Region-enriched R8: 3.157/0.02236 |
PRR9 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_047771 {REF} {Length: 4344} {TRANSSPLICED} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=49.7, Expect=3e-07]} {Celegans: WBGene00018026, F35A5.4, [Score=52.0, Expect=3e-07]} {RNA1509_42296} {RNA1310_15876.1} {RNA815_5293} |
37. | MligTC455_27301 | 1291 | 26.89 | Mlig455_031019 | Neo: - |
0.952 | - | - | - | - | - | 0.952 | Mlig455_031019 {REF} {Length: 3754} {Smed: dd_Smed_v6_5420_0_1, dd_Smed_v6_5420_0_1, [RH, Score=177, Expect=9e-56]} {RNA1509_31486} {RNA1310_20686, RNA1509_31486} {RNA1509_31486, RNA815_9356.1} | |
38. | MligTC455_30612 | 1648 | 34.34 | Mlig455_025064, Mlig455_025079 | Neo: - Age: - Regeneration-upregulated BL: 1.362 Regeneration-enriched BL: 1.362 |
HCK | 0.952 | - | - | - | - | - | 0.952 | Mlig455_025064 {REF} {Length: 4379} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=313.8]; Protein kinase domain [PF00069.27, score=164.9]; SH2 domain [PF00017.26, score=61.6]; SH3 domain [PF00018.30, score=49.4]; Variant SH3 domain [PF14604.8, score=42.0]; Variant SH3 domain [PF07653.19, score=32.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]; Haspin like kinase domain [PF12330.10, score=18.8]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [RH, Score=444, Expect=2e-151]} {Mouse: ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [RH, Score=441, Expect=2e-150]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=446, Expect=4e-152]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=420, Expect=1e-142]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_7905} {RNA1310_7339} {RNA815_2133.1} Mlig455_025079 {REF} {Length: 4392} {TRANSSPLICED} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=313.8]; Protein kinase domain [PF00069.27, score=164.9]; SH2 domain [PF00017.26, score=61.6]; SH3 domain [PF00018.30, score=49.4]; Variant SH3 domain [PF14604.8, score=42.0]; Variant SH3 domain [PF07653.19, score=32.2]; ABC1 atypical kinase-like domain [PF03109.18, score=23.9]; Haspin like kinase domain [PF12330.10, score=18.8]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [RH, Score=444, Expect=2e-151]} {Mouse: ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [RH, Score=441, Expect=2e-150]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=446, Expect=4e-152]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=420, Expect=1e-142]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [RH, Score=601, Expect=0.0]} {RNA1509_7905} {RNA1310_7339, RNA1509_7905} {RNA1509_7905, RNA815_2133.1} |
39. | MligTC455_11042 | 103 | 2.15 | Mlig455_050306 | Neo: Int S/G2/M Age: - |
0.95 | - | - | - | - | - | 0.950 | Mlig455_050306 {REF} {Length: 849} {NoTransDecoderORF} {RNA1310_65300} {RNA815_27023} | |
40. | MligTC455_18347 | 118 | 2.46 | Mlig455_000821 | Neo: - |
KCNA1 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_000821 {REF} {Length: 3163} {Pfam: Ion transport protein [PF00520.33, score=166.1]; BTB/POZ domain [PF02214.24, score=97.8]; Ion channel [PF07885.18, score=48.4]} {Human: ENSG00000111262, KCNA1, potassium voltage-gated channel subfamily A member 1, [RH, Score=611, Expect=0.0]; ENSG00000177301, KCNA2, potassium voltage-gated channel subfamily A member 2, [RH, Score=611, Expect=0.0]; ENSG00000177272, KCNA3, potassium voltage-gated channel subfamily A member 3, [RH, Score=610, Expect=0.0]; ENSG00000182255, KCNA4, potassium voltage-gated channel subfamily A member 4, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000040724, Kcna2, potassium voltage-gated channel, shaker-related subfamily, member 2, [RH, Score=611, Expect=0.0]; ENSMUSG00000047976, Kcna1, potassium voltage-gated channel, shaker-related subfamily, member 1, [RH, Score=610, Expect=0.0]; ENSMUSG00000047959, Kcna3, potassium voltage-gated channel, shaker-related subfamily, member 3, [RH, Score=607, Expect=0.0]; ENSMUSG00000042604, Kcna4, potassium voltage-gated channel, shaker-related subfamily, member 4, [RH, Score=587, Expect=0.0]} {Dmel: FBgn0003380, Sh, Shaker, [RH, Score=629, Expect=0.0]} {Celegans: WBGene00014261, shk-1, Potassium voltage-gated channel protein shk-1, [RH, Score=377, Expect=2e-124]} {Smed: dd_Smed_v6_15425_0_1, dd_Smed_v6_15425_0_1, [RH, Score=707, Expect=0.0]} {RNA1509_47579} {RNA1310_8777} {RNA815_4701} |