TomoSeq data search

Data search

Results for MligTC455_04249

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04249	25	0.53	Mlig455_034694	Neo: Irradiation Age: -	CBX3	Mlig455_034694 {REF} {Length: 1104} {TRANSSPLICED} {Pfam: Chromo shadow domain [PF01393.21, score=90.9]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=61.5]} {Human: ENSG00000122565, CBX3, chromobox 3, [RH, Score=167, Expect=8e-51]; ENSG00000094916, CBX5, chromobox 5, [RH, Score=164, Expect=2e-49]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [RH, Score=167, Expect=6e-51]; ENSMUSG00000009575, Cbx5, chromobox 5, [RH, Score=164, Expect=1e-49]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=151, Expect=3e-44]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [RH, Score=89.7, Expect=2e-21]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=162, Expect=1e-48]} {RNA1509_3939} {RNA1310_23368} {RNA815_12305}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04249

0.53

Mlig455_034694

Neo: Irradiation

Age: -

CBX3

Mlig455_034694 {REF} {Length: 1104} {TRANSSPLICED} {Pfam: Chromo shadow domain [PF01393.21, score=90.9]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=61.5]} {Human: ENSG00000122565, CBX3, chromobox 3, [RH, Score=167, Expect=8e-51]; ENSG00000094916, CBX5, chromobox 5, [RH, Score=164, Expect=2e-49]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [RH, Score=167, Expect=6e-51]; ENSMUSG00000009575, Cbx5, chromobox 5, [RH, Score=164, Expect=1e-49]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=151, Expect=3e-44]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [RH, Score=89.7, Expect=2e-21]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=162, Expect=1e-48]} {RNA1509_3939} {RNA1310_23368} {RNA815_12305}

Cumulative graph for MligTC455_04249

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	0.259	0.826	0.99998	1.00000
RegionR2	-0.2	0.826	0.99996	1.00000
RegionR3	-0.072	0.826	0.99999	1.00000
RegionR4	0.325	0.826	0.99998	1.00000
RegionR5	0.04	0.826	0.99997	1.00000
RegionR6	-0.017	0.826	1.00000	1.00000
RegionR7	-0.127	0.826	1.00000	1.00000
RegionR8	-0.208	0.826	0.99999	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-0.029	0.826	1.00000	1.00000
RegenerationR2	2.928	0.826	0.06705	0.42270
RegenerationR3	4.174	0.826	0.04720	0.37845
RegenerationR4	3.547	0.826	0.06329	0.40216
RegenerationR5	3.084	0.826	0.05927	0.38774
RegenerationR6	2.912	0.826	0.17603	0.50925
RegenerationBL	0.155	0.826	1.00000	1.00000
RegenerationTP	3.901	0.826	0.18551	0.62253

Genes with expression patterns similar to MligTC455_04249

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04249	25	0.53	Mlig455_034694	Neo: Irradiation Age: -	CBX3	2	-	-	-	1.000	-	1.000	Mlig455_034694 {REF} {Length: 1104} {TRANSSPLICED} {Pfam: Chromo shadow domain [PF01393.21, score=90.9]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=61.5]} {Human: ENSG00000122565, CBX3, chromobox 3, [RH, Score=167, Expect=8e-51]; ENSG00000094916, CBX5, chromobox 5, [RH, Score=164, Expect=2e-49]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [RH, Score=167, Expect=6e-51]; ENSMUSG00000009575, Cbx5, chromobox 5, [RH, Score=164, Expect=1e-49]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=151, Expect=3e-44]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [RH, Score=89.7, Expect=2e-21]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=162, Expect=1e-48]} {RNA1509_3939} {RNA1310_23368} {RNA815_12305}
2.	MligTC455_12969	66	1.37	Mlig455_022444	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-2.475	WSCD2	0.971	-	-	-	0.971	-	-	Mlig455_022444 {REF} {Length: 1083} {Pfam: WSC domain [PF01822.21, score=46.8]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.5, Expect=1e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=58.9, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=46.2, Expect=1e-05]} {RNA1509_43359} {RNA1310_42988.1} {RNA815_39030}
3.	MligTC455_03064	60	1.25	Mlig455_032126	Neo: - Age: logFC(26M/2M)=-0.332 Regeneration-upregulated R3: 6.596 Regeneration-enriched R3: 6.596	STX10	0.968	-	-	-	0.968	-	-	Mlig455_032126 {REF} {Length: 1118} {TRANSSPLICED} {Pfam: Syntaxin 6, N-terminal [PF09177.13, score=52.7]} {Human: ENSG00000104915, STX10, syntaxin 10, [Score=55.5, Expect=1e-08]} {RNA1509_22750} {RNA1310_26857} {RNA815_19056}
4.	MligTC455_19407	8	0.16	Mlig455_013815	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_013815 {REF} {Length: 1008} {RNA1310_77749}
5.	MligTC455_37204	18	0.38	Mlig455_054272	Neo: - Age: -		0.957	-	-	-	0.957	-	-	Mlig455_054272 {REF} {Length: 3181} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=24.4]} {RNA1509_7329} {RNA1310_29315} {RNA815_21191}
6.	MligTC455_43445	98	2.05	Mlig455_043288	Neo: - Age: -		0.955	-	-	-	0.955	-	-	Mlig455_043288 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=86.6]} {Dmel: FBgn0034172, CG6665, [Score=57.8, Expect=2e-09]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288}