M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_43445

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43445 98 2.05 Mlig455_043288

Neo: -

Age: -

 Mlig455_043288 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=86.6]} {Dmel: FBgn0034172, CG6665, [Score=57.8, Expect=2e-09]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288}

Cumulative graph for MligTC455_43445

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.79 2.166 0.99989 1.00000
RegionR2 0.831 2.166 0.53789 0.90699
RegionR3 0.95 2.166 0.43159 0.95135
RegionR4 0.881 2.166 0.49962 0.82655
RegionR5 1.678 2.166 0.13121 0.36840
RegionR6 0.566 2.166 0.58727 1.00000
RegionR7 1.726 2.166 0.28018 0.91271
RegionR8 -3.842 2.166 0.99984 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.304 2.166 0.99997 1.00000
RegenerationR2 1.207 2.166 0.20892 0.65639
RegenerationR3 -0.691 2.166 0.52916 0.87126
RegenerationR4 -0.001 2.166 0.97904 1.00000
RegenerationR5 1.314 2.166 0.14071 0.55365
RegenerationR6 -0.719 2.166 0.54648 0.83693
RegenerationBL 2.2 2.166 0.20445 0.54511
RegenerationTP 1.301 2.166 0.56093 0.93947


Genes with expression patterns similar to MligTC455_43445

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43445 98 2.05 Mlig455_043288

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_043288 {REF} {Length: 1770} {TRANSSPLICED} {Pfam: NICE-3 protein [PF07406.13, score=86.6]} {Dmel: FBgn0034172, CG6665, [Score=57.8, Expect=2e-09]} {RNA1509_24375} {RNA1310_15514.2} {RNA815_13288}
2. MligTC455_47059 218 4.54 Mlig455_042173

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.399

Region-enriched R5: 3.792/0.00000

 HLF 2.75 - - 0.982 - 0.844 0.924 Mlig455_042173 {REF} {Length: 2486} {Pfam: Basic region leucine zipper [PF07716.17, score=51.1]; bZIP transcription factor [PF00170.23, score=22.7]} {Human: ENSG00000108924, HLF, HLF, PAR bZIP transcription factor, [RH, Score=86.7, Expect=1e-18]; ENSG00000167074, TEF, TEF, PAR bZIP transcription factor, [RH, Score=85.1, Expect=3e-18]; ENSG00000105516, DBP, D-box binding PAR bZIP transcription factor, [RH, Score=85.1, Expect=6e-18]} {Mouse: ENSMUSG00000003949, Hlf, hepatic leukemia factor, [RH, Score=86.3, Expect=1e-18]; ENSMUSG00000022389, Tef, thyrotroph embryonic factor, [RH, Score=85.9, Expect=1e-18]; ENSMUSG00000059824, Dbp, D site albumin promoter binding protein, [RH, Score=84.3, Expect=7e-18]} {Dmel: FBgn0034096, CG7786, [RH, Score=110, Expect=1e-28]} {Celegans: WBGene00000469, ces-2, Cell death specification protein 2, [RH, Score=80.1, Expect=2e-17]} {Smed: dd_Smed_v6_14028_0_2, dd_Smed_v6_14028_0_2, [RH, Score=69.7, Expect=2e-14]} {RNA1509_22777, RNA1509_50395} {RNA1310_10538, RNA1509_22777, RNA1509_50395} {RNA1509_22777, RNA1509_50395, RNA815_13144}
3. MligTC455_34068 567 11.8 Mlig455_009664, Mlig455_010407, Mlig455_031612, Mlig455_050259, Mlig455_065768, Mlig455_066926

Neo: Irradiation

Age: -

Region-enriched R5: 5.319/0.00000
Region-enriched R2: 4.829/0.00239
Region-enriched R6: 3.861/0.00009

 2.741 - - 0.899 - 0.888 0.954

Mlig455_009664 {REF} {Length: 141} {NoTransDecoderORF} {RNA1509_29619} {RNA1310_137182} {RNA815_43642}

Mlig455_010407 {REF} {Length: 1935} {Pfam: Domain of unknown function (DUF6471) [PF20075.1, score=82.7]; Clathrin-binding domain of Huntingtin-interacting protein 1 [PF16515.7, score=28.7]; Fibrinogen alpha/beta chain family [PF08702.12, score=19.1]} {Dmel: FBgn0034294, Muc55B, Mucin 55B, [Score=52.0, Expect=1e-06]} {RNA1509_29619} {RNA1310_30104} {RNA815_25795}

Mlig455_031612 {REF} {Length: 624} {RNA1509_29619} {RNA1310_118182} {RNA815_55861}

Mlig455_050259 {REF} {Length: 891} {RNA1509_29619} {RNA1310_18456} {RNA815_43862}

Mlig455_065768 {REF} {Length: 498} {RNA1509_29619} {RNA1310_124411} {RNA815_54604}

Mlig455_066926 {REF} {Length: 2079} {RNA1509_29619} {RNA1310_77715, RNA1509_29619} {RNA1509_29619, RNA815_17066.1}
4. MligTC455_22188 341 7.1 Mlig455_001534

Neo: Irradiation

Age: -

Region-enriched R5: 3.153/0.00000

 2.583 - - 0.846 - 0.960 0.777 Mlig455_001534 {REF} {Length: 2388} {Pfam: GRAM domain [PF02893.22, score=32.5]; SDA1 [PF05285.14, score=19.9]; MRVI1 protein [PF05781.14, score=17.5]} {Dmel: FBgn0085423, CG34394, [Score=50.1, Expect=2e-06]} {RNA1509_39913, RNA1509_48384, RNA1509_54746} {RNA1310_26092, RNA1509_39913, RNA1509_48384, RNA1509_54746} {RNA1509_39913, RNA1509_48384, RNA1509_54746, RNA815_28931}
5. MligTC455_31157 663 13.81 Mlig455_049596

Neo: Neoblast, stringent

Age: Down-Up-Up

Region-enriched R5: 2.154/0.00000

 1.728 - - 0.967 - - 0.761 Mlig455_049596 {REF} {Length: 788} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1761) [PF08570.12, score=41.3]} {RNA1509_39908} {RNA1310_45121, RNA1509_39908} {RNA1509_39908, RNA815_26658}
6. MligTC455_34505 332 6.92 Mlig455_056584, Mlig455_056605

Neo: Int S/G2/M

Age: -

Region-enriched R5: 3.021/0.00055

 SLBP 1.718 - - 0.965 - - 0.753

Mlig455_056584 {REF} {Length: 2776} {TRANSSPLICED} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079}

Mlig455_056605 {REF} {Length: 2903} {Pfam: Histone RNA hairpin-binding protein RNA-binding domain [PF15247.8, score=82.9]} {Human: ENSG00000163950, SLBP, stem-loop binding protein, [RH, Score=85.5, Expect=8e-19]} {Mouse: ENSMUSG00000004642, Slbp, stem-loop binding protein, [RH, Score=87.8, Expect=2e-19]} {Dmel: FBgn0041186, Slbp, Stem-loop binding protein, [RH, Score=77.0, Expect=8e-16]} {Celegans: WBGene00000411, cdl-1, Histone RNA hairpin-binding protein, [RH, Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_9628_0_1, dd_Smed_v6_9628_0_1, [RH, Score=101, Expect=2e-24]} {RNA1509_42724} {RNA1310_22526.2} {RNA815_16079}
7. MligTC455_07427 99 2.05 Mlig455_028172

Neo: -

Age: logFC(26M/2M)=0.806

Region-enriched R5: 4.613/0.00039

 1.7 0.719 - - - - 0.981 Mlig455_028172 {REF} {Length: 666} {RNA1509_40406} {RNA1310_81489} {RNA815_42638}
8. MligTC455_11333 14 0.3 Mlig455_057601

Neo: Irradiation

Age: Up-Up-Down

 1.699 - - - - 0.746 0.953 Mlig455_057601 {REF} {Length: 1298} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=23.9]} {RNA1509_58421} {RNA1310_23488.1} {RNA815_11565}
9. MligTC455_13227 114 2.38 Mlig455_059425

Neo: -

Age: -

Region-enriched R5: 3.436/0.00076

 0.996 - - - - - 0.996 Mlig455_059425 {REF} {Length: 2024} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=28.8]} {RNA1509_50589} {RNA1310_17944, RNA1509_50589} {RNA1509_50589, RNA815_7628}
10. MligTC455_52419 214 4.46 Mlig455_036527

Neo: Irradiation

Age: Down-Down-Up

Region-enriched R5: 4.262/0.00000

 0.983 - - - - - 0.983 Mlig455_036527 {REF} {Length: 2552} {Smed: dd_Smed_v6_2845_0_1, dd_Smed_v6_2845_0_1, [RH, Score=47.8, Expect=2e-07]} {RNA1509_3969} {RNA1310_16554, RNA1509_3969} {RNA1509_3969, RNA815_8939}
11. MligTC455_40769 26 0.54 Mlig455_007570

Neo: -

Age: -

 SIX1 0.971 - - - - - 0.971 Mlig455_007570 {REF} {Length: 3034} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=158.1]; Homeodomain [PF00046.31, score=52.2]; Homeobox KN domain [PF05920.13, score=46.6]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [RH, Score=343, Expect=3e-116]; ENSG00000170577, SIX2, SIX homeobox 2, [RH, Score=341, Expect=4e-115]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [RH, Score=343, Expect=2e-116]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [RH, Score=342, Expect=1e-115]} {Dmel: FBgn0003460, so, sine oculis, [RH, Score=343, Expect=1e-114]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=254, Expect=3e-82]} {Smed: dd_Smed_v6_9774_0_1, dd_Smed_v6_9774_0_1, [RH, Score=357, Expect=5e-119]} {RNA1509_55511} {RNA1310_57635} {RNA815_51085}
12. MligTC455_12087 94 1.97 Mlig455_028142, Mlig455_063570

Neo: -

Age: Down-Down-Down

 SNAI2 0.97 - - - 0.970 - -

Mlig455_028142 {REF} {Length: 1403} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=70.9]; Zinc-finger double domain [PF13465.8, score=59.7]; C2H2-type zinc finger [PF13894.8, score=55.9]; C2H2-type zinc finger [PF13912.8, score=40.9]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.5]; Zinc-finger of C2H2 type [PF12874.9, score=30.3]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=27.5]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [Score=182, Expect=4e-57]; ENSG00000185669, SNAI3, snail family transcriptional repressor 3, [Score=177, Expect=1e-54]; ENSG00000124216, SNAI1, snail family transcriptional repressor 1, [Score=173, Expect=2e-53]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [Score=182, Expect=3e-57]; ENSMUSG00000042821, Snai1, snail family zinc finger 1, [Score=176, Expect=1e-54]; ENSMUSG00000006587, Snai3, snail family zinc finger 3, [Score=173, Expect=3e-53]} {Dmel: FBgn0001983, wor, worniu, [Score=179, Expect=3e-53]} {Celegans: WBGene00019299, snai-1, SNAIl family zinc finger 2 transcription factor homolog, [Score=137, Expect=6e-41]} {Smed: dd_Smed_v6_10216_0_1, dd_Smed_v6_10216_0_1, [Score=179, Expect=6e-56]} {RNA1509_43471} {RNA1310_31295.1} {RNA815_31028}

Mlig455_063570 {REF} {Length: 2075} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=82.3]; C2H2-type zinc finger [PF13894.8, score=65.4]; Zinc-finger double domain [PF13465.8, score=58.7]; C2H2-type zinc finger [PF13912.8, score=37.3]; Zinc-finger of C2H2 type [PF12874.9, score=36.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=35.1]; C2HE / C2H2 / C2HC zinc-binding finger [PF16278.7, score=29.3]} {Human: ENSG00000019549, SNAI2, snail family transcriptional repressor 2, [Score=197, Expect=1e-60]} {Mouse: ENSMUSG00000022676, Snai2, snail family zinc finger 2, [Score=197, Expect=9e-61]} {Dmel: FBgn0001983, wor, worniu, [Score=194, Expect=4e-57]} {Celegans: WBGene00019299, snai-1, SNAIl family zinc finger 2 transcription factor homolog, [Score=148, Expect=3e-43]} {Smed: dd_Smed_v6_10216_0_1, dd_Smed_v6_10216_0_1, [Score=189, Expect=1e-57]} {RNA1509_43471} {RNA1310_31295.1} {RNA815_31028}
13. MligTC455_24305 307 6.4 Mlig455_031725

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.025/0.00021

 CDK10 0.969 - - 0.969 - - - Mlig455_031725 {REF} {Length: 2239} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=218.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=113.6]} {Human: ENSG00000185324, CDK10, cyclin dependent kinase 10, [RH, Score=424, Expect=4e-148]} {Mouse: ENSMUSG00000033862, Cdk10, cyclin-dependent kinase 10, [RH, Score=425, Expect=6e-149]} {Dmel: FBgn0013435, Cdc2rk, Cdc2-related kinase, [RH, Score=376, Expect=3e-129]} {Celegans: WBGene00015203, cdk-11.1, Putative serine/threonine-protein kinase B0495.2, [Score=281, Expect=3e-88]} {Smed: dd_Smed_v6_3540_0_1, dd_Smed_v6_3540_0_1, [Score=333, Expect=4e-111]} {RNA1509_21209, RNA1509_31945} {RNA1310_24707, RNA1509_21209} {RNA1509_21209, RNA815_10940}
14. MligTC455_09196 28 0.59 Mlig455_046836

Neo: -

Age: -

 0.968 - - - 0.968 - - Mlig455_046836 {REF} {Length: 3502} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=187.1]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=55.1, Expect=2e-07]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=62.4, Expect=9e-10]} {Smed: dd_Smed_v6_8949_0_1, dd_Smed_v6_8949_0_1, [Score=75.1, Expect=6e-14]} {RNA1509_28410} {RNA1310_44135} {RNA815_33213}
15. MligTC455_51852 102 2.13 Mlig455_053998

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_053998 {REF} {Length: 2419} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.4]; MFS/sugar transport protein [PF13347.8, score=48.2]; PUCC protein [PF03209.17, score=37.6]; MFS_1 like family [PF12832.9, score=36.6]; Sugar (and other) transporter [PF00083.26, score=26.0]} {Smed: dd_Smed_v6_8550_0_1, dd_Smed_v6_8550_0_1, [RH, Score=453, Expect=7e-155]} {RNA1509_53540} {RNA1310_30811.1} {RNA815_24118}
16. MligTC455_01681 7 0.15 Mlig455_006560

Neo: -

Age: -

 0.963 - - - 0.963 - - Mlig455_006560 {REF} {Length: 301} {NoTransDecoderORF}
17. MligTC455_44705 329 6.86 Mlig455_048425

Neo: -

Age: -

Region-enriched R5: 1.944/0.00052

 0.96 - - - - - 0.960 Mlig455_048425 {REF} {Length: 421} {NoTransDecoderORF} {RNA1509_44162} {RNA1310_5719.1} {RNA815_18868}
18. MligTC455_44820 40 0.84 Mlig455_002329

Neo: -

Age: Down-Up-Up

 0.96 - - - - - 0.960 Mlig455_002329 {REF} {Length: 2594} {RNA1310_13211.1} {RNA815_63372}
19. MligTC455_44706 695 14.48 Mlig455_048568, Mlig455_049046

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.781/0.00154

 0.959 - - - - - 0.959

Mlig455_048568 {REF} {Length: 3178} {Pfam: Tudor domain [PF00567.26, score=60.2]} {RNA1509_8410} {RNA1310_5719.1} {RNA815_14685}

Mlig455_049046 {REF} {Length: 3717} {TRANSSPLICED} {Pfam: Tudor domain [PF00567.26, score=60.1]} {RNA1509_44602, RNA1509_8410} {RNA1310_5719.1, RNA1509_44602} {RNA1509_44602, RNA815_14685}
20. MligTC455_17776 118 2.45 Mlig455_025304

Neo: -

Age: Up-Down-Down

 SLC9B2 0.957 - - - - - 0.957 Mlig455_025304 {REF} {Length: 2699} {TRANSSPLICED} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=88.3]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [RH, Score=353, Expect=5e-115]} {Mouse: ENSMUSG00000037994, Slc9b2, solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2, [RH, Score=353, Expect=8e-115]} {Dmel: FBgn0031865, Nha1, Na[+]/H[+] hydrogen antiporter 1, [RH, Score=260, Expect=6e-78]} {Celegans: WBGene00009618, F41E7.2, [RH, Score=171, Expect=2e-46]} {Smed: dd_Smed_v6_7736_0_2, dd_Smed_v6_7736_0_2, [RH, Score=353, Expect=7e-116]} {RNA1509_23649} {RNA1310_14179} {RNA815_5527.2}
21. MligTC455_04249 25 0.53 Mlig455_034694

Neo: Irradiation

Age: -

 CBX3 0.955 - - - 0.955 - - Mlig455_034694 {REF} {Length: 1104} {TRANSSPLICED} {Pfam: Chromo shadow domain [PF01393.21, score=90.9]; Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=61.5]} {Human: ENSG00000122565, CBX3, chromobox 3, [RH, Score=167, Expect=8e-51]; ENSG00000094916, CBX5, chromobox 5, [RH, Score=164, Expect=2e-49]} {Mouse: ENSMUSG00000029836, Cbx3, chromobox 3, [RH, Score=167, Expect=6e-51]; ENSMUSG00000009575, Cbx5, chromobox 5, [RH, Score=164, Expect=1e-49]} {Dmel: FBgn0030082, HP1b, Heterochromatin Protein 1b, [Score=151, Expect=3e-44]} {Celegans: WBGene00001995, hpl-1, HP1 Like (Heterochromatin protein); Heterochromatin protein 1 homolog, [RH, Score=89.7, Expect=2e-21]} {Smed: dd_Smed_v6_928_0_1, dd_Smed_v6_928_0_1, [Score=162, Expect=1e-48]} {RNA1509_3939} {RNA1310_23368} {RNA815_12305}
22. MligTC455_12969 66 1.37 Mlig455_022444

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-2.475

 WSCD2 0.954 - - - 0.954 - - Mlig455_022444 {REF} {Length: 1083} {Pfam: WSC domain [PF01822.21, score=46.8]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=53.5, Expect=1e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=58.9, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=46.2, Expect=1e-05]} {RNA1509_43359} {RNA1310_42988.1} {RNA815_39030}
23. MligTC455_15132 12 0.25 Mlig455_058626

Neo: -

Age: -

 RYK 0.954 - - - 0.954 - - Mlig455_058626 {REF} {Length: 1054} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=152.8]; Protein kinase domain [PF00069.27, score=69.9]} {Human: ENSG00000163785, RYK, receptor-like tyrosine kinase, [Score=176, Expect=5e-53]} {Mouse: ENSMUSG00000032547, Ryk, receptor-like tyrosine kinase, [Score=177, Expect=3e-53]} {Dmel: FBgn0024245, dnt, doughnut on 2, [Score=163, Expect=3e-48]} {Celegans: WBGene00003007, lin-18, Inactive tyrosine-protein kinase RYK, [Score=147, Expect=3e-42]} {Smed: dd_Smed_v6_12594_0_3, dd_Smed_v6_12594_0_3, [Score=181, Expect=1e-54]} {RNA1509_4740} {RNA1310_29116} {RNA815_12893}
24. MligTC455_23761 37 0.77 Mlig455_013965

Neo: Irradiation

Age: -

Region-enriched R4: 4.509/0.01280
Region-enriched R5: 2.834/0.02001

 0.954 - - - - - 0.954 Mlig455_013965 {REF} {Length: 3057} {TRANSSPLICED} {RNA1509_15627, RNA1509_58623, RNA1509_59327} {RNA1310_7136.1, RNA1509_15627, RNA1509_58623, RNA1509_59327} {RNA1509_15627, RNA1509_58623, RNA1509_59327, RNA815_6259}
25. MligTC455_30363 240 5 Mlig455_011101

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.846

 0.954 - - - - - 0.954 Mlig455_011101 {REF} {Length: 2013} {NoTransDecoderORF} {RNA1509_33897} {RNA1310_18647} {RNA815_14645}
26. MligTC455_31119 17 0.36 Mlig455_041124

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_041124 {REF} {Length: 4159} {TRANSSPLICED} {RNA1310_20292} {RNA815_18212}
27. MligTC455_23254 56 1.16 Mlig455_020486

Neo: -

Age: -

 0.953 - - - - - 0.953 Mlig455_020486 {REF} {Length: 1473} {TRANSSPLICED} {RNA1310_31763} {RNA815_30486}
28. MligTC455_14816 8 0.17 Mlig455_045310

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_045310 {REF} {Length: 535} {NoTransDecoderORF}
29. MligTC455_35144 828 17.25 Mlig455_042024

Neo: Germline

Age: -

Region-specific R5: 4.022

Region-enriched R5: 3.233/0.00000

 0.951 - - - - - 0.951 Mlig455_042024 {REF} {Length: 3147} {RNA1509_17316, RNA1509_4449, RNA1509_51282} {RNA1310_5632, RNA1509_4449, RNA1509_51282} {RNA1509_4449, RNA1509_51282, RNA815_1618.1}
30. MligTC455_19108 277 5.78 Mlig455_002320

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.754/0.03282
Region-enriched R5: 1.455/0.01966

 PSMC3IP 0.95 - - - - - 0.950 Mlig455_002320 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.3]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]; Filament-like plant protein, long coiled-coil [PF05911.13, score=21.4]; Penicillinase repressor [PF03965.18, score=19.7]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=130, Expect=4e-37]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=147, Expect=9e-44]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=138, Expect=1e-40]} {RNA1509_18951, RNA1509_36312} {RNA1310_38683, RNA1509_18951, RNA1509_36312} {RNA1509_18951, RNA1509_36312, RNA815_16821}
31. MligTC455_27462 41 0.85 Mlig455_067315

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_067315 {REF} {Length: 446} {RNA1509_44107} {RNA1310_27961} {RNA815_35358}
32. MligTC455_46056 15 0.3 Mlig455_026871

Neo: -

Age: -

 PCBD1 0.95 - - - - - 0.950 Mlig455_026871 {REF} {Length: 510} {TRANSSPLICED} {Pfam: Pterin 4 alpha carbinolamine dehydratase [PF01329.21, score=104.4]} {Human: ENSG00000166228, PCBD1, pterin-4 alpha-carbinolamine dehydratase 1, [RH, Score=125, Expect=9e-38]} {Mouse: ENSMUSG00000020098, Pcbd1, pterin 4 alpha carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 1, [RH, Score=126, Expect=2e-38]} {Dmel: FBgn0024841, Pcd, pterin-4a-carbinolamine dehydratase, [RH, Score=130, Expect=8e-39]} {Celegans: WBGene00020397, pcbd-1, Putative pterin-4-alpha-carbinolamine dehydratase, [RH, Score=128, Expect=7e-39]} {Smed: dd_Smed_v6_1214_0_1, dd_Smed_v6_1214_0_1, [RH, Score=114, Expect=7e-34]} {RNA1509_56343} {RNA1310_47859.1} {RNA815_17315.2}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA