TomoSeq data search

Data search

Results for MligTC455_04343

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04343	10	0.20	Mlig455_001997, Mlig455_002090, Mlig455_002200	Neo: - Age: -	TFAP2D	Mlig455_001997 {REF} {Length: 1999} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.5]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=226, Expect=2e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=7e-65]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=226, Expect=2e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=3e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=207, Expect=3e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]} Mlig455_002090 {REF} {Length: 1726} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.2]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=5e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=7e-75]} Mlig455_002200 {REF} {Length: 1709} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.1]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=6e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04343

0.20

Mlig455_001997, Mlig455_002090, Mlig455_002200

Neo: -

Age: -

TFAP2D

Mlig455_001997 {REF} {Length: 1999} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.5]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=226, Expect=2e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=7e-65]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=226, Expect=2e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=3e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=207, Expect=3e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]}

Mlig455_002090 {REF} {Length: 1726} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.2]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=5e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=7e-75]}

Mlig455_002200 {REF} {Length: 1709} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.1]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=6e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]}

Cumulative graph for MligTC455_04343

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.992	0.578	0.99990	1.00000
RegionR2	3.02	0.578	0.99989	1.00000
RegionR3	0.69	0.578	0.99992	1.00000
RegionR4	-2.905	0.578	0.99976	1.00000
RegionR5	-0.522	0.578	0.99991	1.00000
RegionR6	0.246	0.578	0.99997	1.00000
RegionR7	1.177	0.578	0.99996	1.00000
RegionR8	1.286	0.578	0.99998	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.061	0.578	0.99997	1.00000
RegenerationR2	1.374	0.578	0.99979	1.00000
RegenerationR3	1.587	0.578	0.99987	1.00000
RegenerationR4	3.034	0.578	1.00000	1.00000
RegenerationR5	-0.212	0.578	0.99990	1.00000
RegenerationR6	-0.275	0.578	0.99993	1.00000
RegenerationBL	2.175	0.578	1.00000	1.00000
RegenerationTP	-0.914	0.578	0.99992	1.00000

Genes with expression patterns similar to MligTC455_04343

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04343	10	0.2	Mlig455_001997, Mlig455_002090, Mlig455_002200	Neo: - Age: -	TFAP2D	1	-	-	-	-	1.000	-	Mlig455_001997 {REF} {Length: 1999} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.5]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=226, Expect=2e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=7e-65]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=226, Expect=2e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=3e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=207, Expect=3e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]} Mlig455_002090 {REF} {Length: 1726} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.2]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=5e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=7e-75]} Mlig455_002200 {REF} {Length: 1709} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.1]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=6e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]}
2.	MligTC455_20010	83	1.72	Mlig455_003143, Mlig455_062747	Neo: - Age: Up-Down-Down		0.974	-	-	-	-	0.974	-	Mlig455_003143 {REF} {Length: 2444} {NoTransDecoderORF} {RNA1509_20444} {RNA1310_68389} {RNA815_19417} Mlig455_062747 {REF} {Length: 1276} {NoTransDecoderORF} {RNA1509_20444} {RNA1310_126134} {RNA815_134.1}
3.	MligTC455_02890	22	0.45	Mlig455_066296	Neo: Germline Age: -		0.971	-	-	-	-	0.971	-	Mlig455_066296 {REF} {Length: 1535} {RNA1509_42369} {RNA1310_21266} {RNA815_29273}
4.	MligTC455_27672	20	0.41	Mlig455_004038, Mlig455_036392	Neo: - Age: Up-Down-Down	PIF1	0.967	-	-	-	-	0.967	-	Mlig455_004038 {REF} {Length: 9557} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=94.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=92.3]; AAA domain [PF13604.8, score=60.5]; AAA domain [PF13245.8, score=34.7]; OTU-like cysteine protease [PF02338.21, score=24.2]; Helicase [PF02689.16, score=17.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=9e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=129, Expect=7e-30]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=124, Expect=2e-28]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=111, Expect=2e-24]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193} Mlig455_036392 {REF} {Length: 5388} {Pfam: PIF1-like helicase [PF05970.16, score=87.9]; AAA domain [PF13604.8, score=49.4]; AAA domain [PF13245.8, score=24.0]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=18.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=104, Expect=4e-23]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=101, Expect=3e-22]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=86.7, Expect=1e-17]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}
5.	MligTC455_24398	63	1.31	Mlig455_040650	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_040650 {REF} {Length: 2026} {RNA1509_54646} {RNA1310_12048} {RNA815_7357}
6.	MligTC455_12661	25	0.51	Mlig455_063823	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_063823 {REF} {Length: 1191} {RNA1310_131240}