TomoSeq data search

Data search

Results for MligTC455_27672

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_27672	20	0.41	Mlig455_004038, Mlig455_036392	Neo: - Age: Up-Down-Down	PIF1	Mlig455_004038 {REF} {Length: 9557} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=94.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=92.3]; AAA domain [PF13604.8, score=60.5]; AAA domain [PF13245.8, score=34.7]; OTU-like cysteine protease [PF02338.21, score=24.2]; Helicase [PF02689.16, score=17.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=9e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=129, Expect=7e-30]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=124, Expect=2e-28]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=111, Expect=2e-24]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193} Mlig455_036392 {REF} {Length: 5388} {Pfam: PIF1-like helicase [PF05970.16, score=87.9]; AAA domain [PF13604.8, score=49.4]; AAA domain [PF13245.8, score=24.0]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=18.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=104, Expect=4e-23]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=101, Expect=3e-22]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=86.7, Expect=1e-17]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_27672

0.41

Mlig455_004038, Mlig455_036392

Neo: -

Age: Up-Down-Down

PIF1

Mlig455_004038 {REF} {Length: 9557} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=94.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=92.3]; AAA domain [PF13604.8, score=60.5]; AAA domain [PF13245.8, score=34.7]; OTU-like cysteine protease [PF02338.21, score=24.2]; Helicase [PF02689.16, score=17.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=9e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=129, Expect=7e-30]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=124, Expect=2e-28]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=111, Expect=2e-24]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}

Mlig455_036392 {REF} {Length: 5388} {Pfam: PIF1-like helicase [PF05970.16, score=87.9]; AAA domain [PF13604.8, score=49.4]; AAA domain [PF13245.8, score=24.0]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=18.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=104, Expect=4e-23]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=101, Expect=3e-22]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=86.7, Expect=1e-17]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}

Cumulative graph for MligTC455_27672

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.434	0.787	0.99967	1.00000
RegionR2	1.926	0.787	0.99995	1.00000
RegionR3	2.83	0.787	0.99996	1.00000
RegionR4	0.776	0.787	0.99990	1.00000
RegionR5	2.797	0.787	0.99989	1.00000
RegionR6	2.002	0.787	0.99991	1.00000
RegionR7	0.332	0.787	0.99998	1.00000
RegionR8	-4.229	0.787	0.99969	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.064	0.787	0.99993	1.00000
RegenerationR2	2.589	0.787	0.16356	0.60078
RegenerationR3	2.405	0.787	0.03808	0.34402
RegenerationR4	2.785	0.787	0.02947	0.27667
RegenerationR5	0.069	0.787	0.47839	0.84626
RegenerationR6	3.464	0.787	0.02484	0.19655
RegenerationBL	4.289	0.787	0.03302	0.20382
RegenerationTP	1.05	0.787	0.99997	1.00000

Genes with expression patterns similar to MligTC455_27672

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_27672	20	0.41	Mlig455_004038, Mlig455_036392	Neo: - Age: Up-Down-Down	PIF1	2	-	-	-	1.000	1.000	-	Mlig455_004038 {REF} {Length: 9557} {TRANSSPLICED} {Pfam: PIF1-like helicase [PF05970.16, score=94.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=92.3]; AAA domain [PF13604.8, score=60.5]; AAA domain [PF13245.8, score=34.7]; OTU-like cysteine protease [PF02338.21, score=24.2]; Helicase [PF02689.16, score=17.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=126, Expect=9e-29]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=129, Expect=7e-30]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=124, Expect=2e-28]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=118, Expect=6e-27]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=111, Expect=2e-24]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193} Mlig455_036392 {REF} {Length: 5388} {Pfam: PIF1-like helicase [PF05970.16, score=87.9]; AAA domain [PF13604.8, score=49.4]; AAA domain [PF13245.8, score=24.0]; ATP-dependent RecD-like DNA helicase SH3 domain [PF18335.3, score=18.5]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=107, Expect=8e-24]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=104, Expect=4e-23]} {Celegans: WBGene00004028, pif-1, ATP-dependent DNA helicase PIF1, [Score=101, Expect=3e-22]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=86.7, Expect=1e-17]} {RNA1509_2607} {RNA1310_72.1} {RNA815_1193}
2.	MligTC455_04343	10	0.2	Mlig455_001997, Mlig455_002090, Mlig455_002200	Neo: - Age: -	TFAP2D	0.967	-	-	-	-	0.967	-	Mlig455_001997 {REF} {Length: 1999} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.5]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=226, Expect=2e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=7e-65]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=226, Expect=2e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=3e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=207, Expect=3e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]} Mlig455_002090 {REF} {Length: 1726} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.2]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=5e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=7e-75]} Mlig455_002200 {REF} {Length: 1709} {Pfam: Transcription factor AP-2 [PF03299.16, score=215.1]} {Human: ENSG00000008197, TFAP2D, transcription factor AP-2 delta, [Score=224, Expect=8e-67]; ENSG00000137203, TFAP2A, transcription factor AP-2 alpha, [Score=220, Expect=2e-65]; ENSG00000008196, TFAP2B, transcription factor AP-2 beta, [Score=219, Expect=1e-64]} {Mouse: ENSMUSG00000042596, Tfap2d, transcription factor AP-2, delta, [Score=224, Expect=6e-67]; ENSMUSG00000021359, Tfap2a, transcription factor AP-2, alpha, [Score=220, Expect=2e-65]; ENSMUSG00000025927, Tfap2b, transcription factor AP-2 beta, [Score=219, Expect=6e-65]} {Dmel: FBgn0261953, TfAP-2, Transcription factor AP-2, [Score=206, Expect=4e-60]} {Celegans: WBGene00019424, aptf-1, Transcription factor aptf-1, [Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_15104_0_1, dd_Smed_v6_15104_0_1, [Score=248, Expect=8e-75]}
3.	MligTC455_24398	63	1.31	Mlig455_040650	Neo: - Age: -		0.964	-	-	-	-	0.964	-	Mlig455_040650 {REF} {Length: 2026} {RNA1509_54646} {RNA1310_12048} {RNA815_7357}
4.	MligTC455_12661	25	0.51	Mlig455_063823	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_063823 {REF} {Length: 1191} {RNA1310_131240}
5.	MligTC455_41464	507	10.57	Mlig455_053551	Neo: - Age: -	EIF2B1	0.95	-	-	-	-	0.950	-	Mlig455_053551 {REF} {Length: 6223} {TRANSSPLICED} {Pfam: Initiation factor 2 subunit family [PF01008.19, score=185.1]} {Human: ENSG00000111361, EIF2B1, eukaryotic translation initiation factor 2B subunit alpha, [Score=202, Expect=5e-58]} {Mouse: ENSMUSG00000029388, Eif2b1, eukaryotic translation initiation factor 2B, subunit 1 (alpha), [Score=208, Expect=2e-60]} {Dmel: FBgn0039726, eIF2Balpha, eukaryotic translation initiation factor 2B subunit alpha, [Score=216, Expect=1e-63]} {Celegans: WBGene00014221, eif-2Balpha, Probable translation initiation factor eIF-2B subunit alpha, [Score=192, Expect=5e-55]} {Smed: dd_Smed_v6_4682_0_1, dd_Smed_v6_4682_0_1, [Score=130, Expect=3e-33]} {RNA1509_30510, RNA1509_37474} {RNA1310_6473, RNA1509_30510} {RNA1509_30510, RNA815_14077}