Data search
Results for MligTC455_04379
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_04379 | 234 | 4.87 | Mlig455_056704 | Neo: - Age: Down-Down-Up |
UBR3 | Mlig455_056704 {REF} {Length: 5714} {Pfam: Proteolysis_6 C-terminal [PF18995.2, score=98.2]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.9]; Ring finger domain [PF13639.8, score=20.7]; zinc-RING finger domain [PF14634.8, score=19.2]} {Human: ENSG00000144357, UBR3, ubiquitin protein ligase E3 component n-recognin 3, [Score=113, Expect=3e-25]} {Mouse: ENSMUSG00000044308, Ubr3, ubiquitin protein ligase E3 component n-recognin 3, [Score=79.0, Expect=1e-14]} {Dmel: FBgn0260970, Ubr3, Ubr3 ubiquitin ligase, [Score=91.3, Expect=1e-18]} {Celegans: WBGene00017373, F10G7.10, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_6166_0_1, dd_Smed_v6_6166_0_1, [Score=90.9, Expect=1e-18]} {RNA1509_51035} {RNA1310_11468} {RNA815_9580} |
Cumulative graph for MligTC455_04379
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -5.418 | 2.937 | 0.22949 | 0.87305 | |
| RegionR2 | 0.828 | 2.937 | 0.43543 | 0.82513 | |
| RegionR3 | 1.036 | 2.937 | 0.23776 | 0.77934 | |
| RegionR4 | 1.435 | 2.937 | 0.15825 | 0.41389 | |
| RegionR5 | 0.803 | 2.937 | 0.36816 | 0.72075 | |
| RegionR6 | 0.537 | 2.937 | 0.57732 | 1.00000 | |
| RegionR7 | 0.511 | 2.937 | 0.62324 | 1.00000 | |
| RegionR8 | 0.268 | 2.937 | 0.76464 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.023 | 2.937 | 0.99996 | 1.00000 | |
| RegenerationR2 | 0.413 | 2.937 | 0.46900 | 0.85736 | |
| RegenerationR3 | -0.262 | 2.937 | 0.69488 | 0.94578 | |
| RegenerationR4 | -0.321 | 2.937 | 0.66365 | 0.93936 | |
| RegenerationR5 | 0.32 | 2.937 | 0.61009 | 0.91427 | |
| RegenerationR6 | -0.22 | 2.937 | 0.75753 | 0.95597 | |
| RegenerationBL | -1.208 | 2.937 | 0.25870 | 0.61613 | |
| RegenerationTP | -0.361 | 2.937 | 0.70206 | 1.00000 |
Genes with expression patterns similar to MligTC455_04379
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_04379 | 234 | 4.87 | Mlig455_056704 | Neo: - Age: Down-Down-Up |
UBR3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_056704 {REF} {Length: 5714} {Pfam: Proteolysis_6 C-terminal [PF18995.2, score=98.2]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.9]; Ring finger domain [PF13639.8, score=20.7]; zinc-RING finger domain [PF14634.8, score=19.2]} {Human: ENSG00000144357, UBR3, ubiquitin protein ligase E3 component n-recognin 3, [Score=113, Expect=3e-25]} {Mouse: ENSMUSG00000044308, Ubr3, ubiquitin protein ligase E3 component n-recognin 3, [Score=79.0, Expect=1e-14]} {Dmel: FBgn0260970, Ubr3, Ubr3 ubiquitin ligase, [Score=91.3, Expect=1e-18]} {Celegans: WBGene00017373, F10G7.10, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_6166_0_1, dd_Smed_v6_6166_0_1, [Score=90.9, Expect=1e-18]} {RNA1509_51035} {RNA1310_11468} {RNA815_9580} |
| 2. | MligTC455_25753 | 134 | 2.8 | Mlig455_040394 | Neo: - Age: Up-Down-Up Region-enriched R4: 2.927/0.00231 |
1.659 | 0.700 | - | - | - | 0.959 | - | Mlig455_040394 {REF} {Length: 5965} {RNA1509_5734} {RNA1310_64234} {RNA815_32443} | |
| 3. | Mlig999024.1 | 0.966 | - | - | - | - | - | 0.966 | ||||||
| 4. | MligTC455_45546 | 2857 | 59.52 | Mlig455_000034, Mlig455_023497, Mlig455_042422, Mlig455_050366, Mlig455_059624 | Neo: - Age: Down-Up-Down |
0.964 | - | - | - | - | 0.964 | - | Mlig455_000034 {REF} {Length: 356} {TRANSSPLICED} {RNA1509_43103} {RNA1310_27460} {RNA815_26067.1} Mlig455_023497 {REF} {Length: 471} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43103} {RNA1310_45665} {RNA815_26067.1} Mlig455_042422 {REF} {Length: 357} {TRANSSPLICED} {RNA1509_43103} {RNA1310_45665} {RNA815_26067.1} Mlig455_050366 {REF} {Length: 357} {TRANSSPLICED} {RNA1509_43103} {RNA1310_45665} {RNA815_26067.1} Mlig455_059624 {REF} {Length: 931} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_14354, RNA1509_35446, RNA1509_43103} {RNA1310_27460, RNA1509_14354, RNA1509_35446, RNA1509_43103} {RNA1509_14354, RNA1509_35446, RNA1509_43103, RNA815_26067.1} |
|
| 5. | MligTC455_39915 | 127 | 2.65 | Mlig455_002965 | Neo: - Age: Up-Down-Up |
HSPB1 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_002965 {REF} {Length: 2866} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=48.1]} {Human: ENSG00000106211, HSPB1, heat shock protein family B (small) member 1, [RH, Score=53.1, Expect=1e-07]; ENSG00000152137, HSPB8, heat shock protein family B (small) member 8, [RH, Score=53.1, Expect=1e-07]} {Mouse: ENSMUSG00000041548, Hspb8, heat shock protein 8, [RH, Score=53.1, Expect=8e-08]} {Celegans: WBGene00002023, hsp-25, Heat Shock Protein, [RH, Score=70.1, Expect=9e-14]} {Smed: dd_Smed_v6_15128_0_2, dd_Smed_v6_15128_0_2, [Score=82.0, Expect=2e-17]} {RNA1509_23358} {RNA1310_19444} {RNA815_29507} |
| 6. | MligTC455_54262 | 215 | 4.48 | Mlig455_017618 | Neo: Int S/G2/M Age: - |
WRAP73 | 0.96 | - | - | - | - | - | 0.960 | Mlig455_017618 {REF} {Length: 2138} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=41.5]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=35.7]; Eukaryotic translation initiation factor eIF2A [PF08662.13, score=21.0]} {Human: ENSG00000116213, WRAP73, WD repeat containing, antisense to TP73, [RH, Score=422, Expect=1e-144]} {Mouse: ENSMUSG00000029029, Wrap73, WD repeat containing, antisense to Trp73, [RH, Score=410, Expect=5e-140]} {Smed: dd_Smed_v6_14024_0_1, dd_Smed_v6_14024_0_1, [RH, Score=295, Expect=6e-96]} {RNA1509_16472} {RNA1310_14155.1, RNA1509_16472} {RNA1509_16472, RNA815_5466.1} |
| 7. | MligTC455_17874 | 26 | 0.54 | Mlig455_003263 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_003263 {REF} {Length: 1862} {Pfam: WSC domain [PF01822.21, score=55.6]; PAN domain [PF00024.28, score=21.9]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=47.0, Expect=1e-05]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=56.6, Expect=9e-09]} {RNA1509_40708} {RNA1310_34394.2} {RNA815_21593} | |
| 8. | MligTC455_28239 | 224 | 4.67 | Mlig455_019487, Mlig455_022546, Mlig455_025484, Mlig455_035873, Mlig455_060690, Mlig455_066751 | Neo: - Age: Down-Up-Down |
0.956 | - | - | - | - | 0.956 | - | Mlig455_019487 {REF} {Length: 943} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_39121} Mlig455_022546 {REF} {Length: 1186} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_33924} Mlig455_025484 {REF} {Length: 3729} {NoTransDecoderORF} {RNA1509_20409, RNA1509_57922} {RNA1310_17062, RNA1509_20409, RNA1509_57922} {RNA1509_20409, RNA1509_57922, RNA815_17069.1} Mlig455_035873 {REF} {Length: 1678} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1, RNA1509_25886} {RNA1509_25886, RNA815_17069.1} Mlig455_060690 {REF} {Length: 2757} {NoTransDecoderORF} {RNA1509_25886} {RNA1310_11504.1} {RNA815_33924} Mlig455_066751 {REF} {Length: 361} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.3} {RNA815_39121} |
|
| 9. | MligTC455_40509 | 462 | 9.63 | Mlig455_049594 | Neo: - Age: Up-Down-Up |
CROCC | 0.955 | - | - | - | - | - | 0.955 | Mlig455_049594 {REF} {Length: 4171} {Pfam: Leucine-zipper of ternary complex factor MIP1 [PF14389.8, score=176.1]; TATA element modulatory factor 1 TATA binding [PF12325.10, score=150.6]; Protein of unknown function (DUF724) [PF05266.16, score=144.7]; BRE1 E3 ubiquitin ligase [PF08647.13, score=141.0]; Afadin- and alpha -actinin-Binding [PF11559.10, score=137.9]; Crescentin protein [PF19220.2, score=134.7]; SlyX [PF04102.14, score=130.3]; Protein of unknown function (DUF1664) [PF07889.14, score=126.0]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=115.9]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=112.0]; Domain of unknown function (DUF5082) [PF16888.7, score=110.9]; Septum formation initiator [PF04977.17, score=110.7]; Ezrin/radixin/moesin family [PF00769.21, score=110.1]; AAA domain [PF13166.8, score=109.8]; Apg6 coiled-coil region [PF17675.3, score=103.5]; Autophagy protein 16 (ATG16) [PF08614.13, score=102.0]; TATA element modulatory factor 1 DNA binding [PF12329.10, score=101.6]; Domain of unknown function (DUF4472) [PF14739.8, score=100.1]; Flagella accessory protein C (FlaC) [PF05377.13, score=97.2]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=92.8]; Sf6-type phage tail needle knob or tip of some Caudovirales [PF16532.7, score=87.8]; Valyl tRNA synthetase tRNA binding arm [PF10458.11, score=87.6]; Fibrinogen alpha/beta chain family [PF08702.12, score=84.5]; Growth-arrest specific micro-tubule binding [PF13851.8, score=83.1]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=78.3]; Spc24 subunit of Ndc80 [PF08286.13, score=77.6]; Tropomyosin like [PF12718.9, score=77.1]; ABC transporter C-terminal domain [PF16326.7, score=75.6]; Fez1 [PF06818.17, score=73.0]; Calcium binding and coiled-coil domain (CALCOCO1) like [PF07888.13, score=72.9]; Basic region leucine zipper [PF07716.17, score=71.6]; Plant protein of unknown function (DUF641) [PF04859.14, score=70.4]; gp58-like protein [PF07902.13, score=67.1]; Protein of unknown function (DUF3450) [PF11932.10, score=64.2]; Protein of unknown function DUF16 [PF01519.18, score=63.2]; Leucine zipper [PF15294.8, score=63.0]; Ciliary protein causing Leber congenital amaurosis disease [PF15619.8, score=62.5]; Troponin [PF00992.22, score=59.9]; Protein of unknown function (DUF812) [PF05667.13, score=58.5]; bZIP transcription factor [PF00170.23, score=55.9]; C-terminal leucine zipper domain of cyclic nucleotide-gated channels [PF16526.7, score=52.0]; Myosin tail [PF01576.21, score=50.7]; N-terminal domain of unknown function (DUF4140) [PF13600.8, score=49.6]; Family of unknown function (DUF6262) [PF19776.1, score=49.6]; Centrosomin N-terminal motif 1 [PF07989.13, score=46.9]; Biogenesis of lysosome-related organelles complex-1 subunit 2 [PF10046.11, score=46.7]; Tektin family [PF03148.16, score=39.4]; Golgi transport complex subunit 5 [PF10392.11, score=38.2]; Laminin Domain I [PF06008.16, score=37.3]; Centrosomal protein of 63 kDa [PF17045.7, score=37.1]; GrpE [PF01025.21, score=36.5]; Intermediate filament protein [PF00038.23, score=35.6]; Nsp1-like C-terminal region [PF05064.15, score=34.2]; Haemolysin XhlA [PF10779.11, score=33.9]; Protein of unknown function (DUF1192) [PF06698.13, score=32.9]; Arabidopsis phospholipase-like protein (PEARLI 4) [PF05278.14, score=32.5]; RIM-binding protein of the cytomatrix active zone [PF10174.11, score=27.5]; Microtubule-associated protein 70 [PF07058.13, score=27.3]; Bacterial type III secretion protein (HrpB7) [PF09486.12, score=27.1]; Mechanosensitive ion channel porin domain [PF12795.9, score=25.3]; Domain of unknown function [PF16378.7, score=24.3]; Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain [PF16454.7, score=24.3]; Spindle Pole Component 29 [PF17082.7, score=24.0]; Dynamin-like helical domain [PF18709.3, score=22.7]; Centrosome localisation domain of PPC89 [PF14197.8, score=22.6]; Cell division protein ZapB [PF06005.14, score=19.1]; Domain of unknown function (DUF4349) [PF14257.8, score=18.0]} {Human: ENSG00000058453, CROCC, ciliary rootlet coiled-coil, rootletin, [Score=60.5, Expect=2e-08]; ENSG00000102189, EEA1, early endosome antigen 1, [Score=59.7, Expect=3e-08]; ENSG00000115355, CCDC88A, coiled-coil domain containing 88A, [Score=59.3, Expect=3e-08]} {Mouse: ENSMUSG00000034243, Golgb1, golgi autoantigen, golgin subfamily b, macrogolgin 1, [RH, Score=52.4, Expect=3e-06]} {Dmel: FBgn0046323, ORY, Occludin-Related Y, [Score=57.4, Expect=6e-08]} {Celegans: WBGene00022500, lfi-1, Lin-5 (Five) Interacting protein, [Score=70.1, Expect=8e-12]} {Smed: dd_Smed_v6_5291_0_1, dd_Smed_v6_5291_0_1, [Score=74.3, Expect=2e-13]} {RNA1509_35903} {RNA1310_53710.1} {RNA815_27781.1} |
| 10. | MligTC455_19869 | 157 | 3.27 | Mlig455_046439, Mlig455_046468 | Neo: - Age: - |
ZNF324 | 0.953 | - | - | - | - | 0.953 | - | Mlig455_046439 {REF} {Length: 4053} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=58.9]; Zinc finger, C2H2 type [PF00096.28, score=53.6]; Zinc-finger double domain [PF13465.8, score=37.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=25.6]} {Human: ENSG00000083812, ZNF324, zinc finger protein 324, [Score=101, Expect=2e-21]} {Mouse: ENSMUSG00000004500, Zfp324, zinc finger protein 324, [Score=102, Expect=3e-22]} {Dmel: FBgn0033934, CG17385, [Score=82.8, Expect=6e-17]} {Celegans: WBGene00011066, ztf-15, Zinc finger putative Transcription Factor family, [RH, Score=67.0, Expect=4e-11]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=83.2, Expect=1e-17]} {RNA1509_14607} {RNA1310_8185} {RNA815_15544} Mlig455_046468 {REF} {Length: 1996} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=69.8]; Zinc finger, C2H2 type [PF00096.28, score=62.0]; Zinc-finger double domain [PF13465.8, score=46.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=36.2]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=25.2]} {Human: ENSG00000083812, ZNF324, zinc finger protein 324, [Score=96.3, Expect=4e-22]; ENSG00000116809, ZBTB17, zinc finger and BTB domain containing 17, [Score=92.0, Expect=3e-20]; ENSG00000189180, ZNF33A, zinc finger protein 33A, [Score=92.0, Expect=3e-20]; ENSG00000249471, ZNF324B, zinc finger protein 324B, [Score=91.7, Expect=3e-20]; ENSG00000188321, ZNF559, zinc finger protein 559, [Score=91.7, Expect=3e-20]} {Mouse: ENSMUSG00000045519, Zfp560, zinc finger protein 560, [Score=97.4, Expect=3e-22]; ENSMUSG00000004500, Zfp324, zinc finger protein 324, [Score=96.3, Expect=5e-22]} {Dmel: FBgn0037617, nom, numerous disordered muscles, [Score=77.0, Expect=8e-16]} {Celegans: WBGene00011066, ztf-15, Zinc finger putative Transcription Factor family, [RH, Score=67.4, Expect=2e-12]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=73.6, Expect=6e-15]} {RNA1509_40166, RNA1509_56111} {RNA1310_14502, RNA1509_40166, RNA1509_56111} {RNA1509_40166, RNA1509_56111, RNA815_25948} |
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