Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_40509 | 462 | 9.63 | Mlig455_049594 | Neo: - Age: Up-Down-Up |
CROCC | Mlig455_049594 {REF} {Length: 4171} {Pfam: Leucine-zipper of ternary complex factor MIP1 [PF14389.8, score=176.1]; TATA element modulatory factor 1 TATA binding [PF12325.10, score=150.6]; Protein of unknown function (DUF724) [PF05266.16, score=144.7]; BRE1 E3 ubiquitin ligase [PF08647.13, score=141.0]; Afadin- and alpha -actinin-Binding [PF11559.10, score=137.9]; Crescentin protein [PF19220.2, score=134.7]; SlyX [PF04102.14, score=130.3]; Protein of unknown function (DUF1664) [PF07889.14, score=126.0]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=115.9]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=112.0]; Domain of unknown function (DUF5082) [PF16888.7, score=110.9]; Septum formation initiator [PF04977.17, score=110.7]; Ezrin/radixin/moesin family [PF00769.21, score=110.1]; AAA domain [PF13166.8, score=109.8]; Apg6 coiled-coil region [PF17675.3, score=103.5]; Autophagy protein 16 (ATG16) [PF08614.13, score=102.0]; TATA element modulatory factor 1 DNA binding [PF12329.10, score=101.6]; Domain of unknown function (DUF4472) [PF14739.8, score=100.1]; Flagella accessory protein C (FlaC) [PF05377.13, score=97.2]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=92.8]; Sf6-type phage tail needle knob or tip of some Caudovirales [PF16532.7, score=87.8]; Valyl tRNA synthetase tRNA binding arm [PF10458.11, score=87.6]; Fibrinogen alpha/beta chain family [PF08702.12, score=84.5]; Growth-arrest specific micro-tubule binding [PF13851.8, score=83.1]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=78.3]; Spc24 subunit of Ndc80 [PF08286.13, score=77.6]; Tropomyosin like [PF12718.9, score=77.1]; ABC transporter C-terminal domain [PF16326.7, score=75.6]; Fez1 [PF06818.17, score=73.0]; Calcium binding and coiled-coil domain (CALCOCO1) like [PF07888.13, score=72.9]; Basic region leucine zipper [PF07716.17, score=71.6]; Plant protein of unknown function (DUF641) [PF04859.14, score=70.4]; gp58-like protein [PF07902.13, score=67.1]; Protein of unknown function (DUF3450) [PF11932.10, score=64.2]; Protein of unknown function DUF16 [PF01519.18, score=63.2]; Leucine zipper [PF15294.8, score=63.0]; Ciliary protein causing Leber congenital amaurosis disease [PF15619.8, score=62.5]; Troponin [PF00992.22, score=59.9]; Protein of unknown function (DUF812) [PF05667.13, score=58.5]; bZIP transcription factor [PF00170.23, score=55.9]; C-terminal leucine zipper domain of cyclic nucleotide-gated channels [PF16526.7, score=52.0]; Myosin tail [PF01576.21, score=50.7]; N-terminal domain of unknown function (DUF4140) [PF13600.8, score=49.6]; Family of unknown function (DUF6262) [PF19776.1, score=49.6]; Centrosomin N-terminal motif 1 [PF07989.13, score=46.9]; Biogenesis of lysosome-related organelles complex-1 subunit 2 [PF10046.11, score=46.7]; Tektin family [PF03148.16, score=39.4]; Golgi transport complex subunit 5 [PF10392.11, score=38.2]; Laminin Domain I [PF06008.16, score=37.3]; Centrosomal protein of 63 kDa [PF17045.7, score=37.1]; GrpE [PF01025.21, score=36.5]; Intermediate filament protein [PF00038.23, score=35.6]; Nsp1-like C-terminal region [PF05064.15, score=34.2]; Haemolysin XhlA [PF10779.11, score=33.9]; Protein of unknown function (DUF1192) [PF06698.13, score=32.9]; Arabidopsis phospholipase-like protein (PEARLI 4) [PF05278.14, score=32.5]; RIM-binding protein of the cytomatrix active zone [PF10174.11, score=27.5]; Microtubule-associated protein 70 [PF07058.13, score=27.3]; Bacterial type III secretion protein (HrpB7) [PF09486.12, score=27.1]; Mechanosensitive ion channel porin domain [PF12795.9, score=25.3]; Domain of unknown function [PF16378.7, score=24.3]; Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain [PF16454.7, score=24.3]; Spindle Pole Component 29 [PF17082.7, score=24.0]; Dynamin-like helical domain [PF18709.3, score=22.7]; Centrosome localisation domain of PPC89 [PF14197.8, score=22.6]; Cell division protein ZapB [PF06005.14, score=19.1]; Domain of unknown function (DUF4349) [PF14257.8, score=18.0]} {Human: ENSG00000058453, CROCC, ciliary rootlet coiled-coil, rootletin, [Score=60.5, Expect=2e-08]; ENSG00000102189, EEA1, early endosome antigen 1, [Score=59.7, Expect=3e-08]; ENSG00000115355, CCDC88A, coiled-coil domain containing 88A, [Score=59.3, Expect=3e-08]} {Mouse: ENSMUSG00000034243, Golgb1, golgi autoantigen, golgin subfamily b, macrogolgin 1, [RH, Score=52.4, Expect=3e-06]} {Dmel: FBgn0046323, ORY, Occludin-Related Y, [Score=57.4, Expect=6e-08]} {Celegans: WBGene00022500, lfi-1, Lin-5 (Five) Interacting protein, [Score=70.1, Expect=8e-12]} {Smed: dd_Smed_v6_5291_0_1, dd_Smed_v6_5291_0_1, [Score=74.3, Expect=2e-13]} {RNA1509_35903} {RNA1310_53710.1} {RNA815_27781.1} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -0.435 | 3.641 | 0.71692 | 1.00000 | |
RegionR2 | 0.356 | 3.641 | 0.50593 | 0.88483 | |
RegionR3 | 0.002 | 3.641 | 0.99458 | 1.00000 | |
RegionR4 | -0.305 | 3.641 | 0.56252 | 0.88215 | |
RegionR5 | 0.337 | 3.641 | 0.36325 | 0.71550 | |
RegionR6 | 0.192 | 3.641 | 0.64642 | 1.00000 | |
RegionR7 | 0.53 | 3.641 | 0.26578 | 0.89557 | |
RegionR8 | -0.678 | 3.641 | 0.30853 | 0.94087 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -5.89 | 3.641 | 0.22085 | 0.95538 | |
RegenerationR2 | -0.089 | 3.641 | 0.83082 | 0.99821 | |
RegenerationR3 | 0.007 | 3.641 | 0.99030 | 1.00000 | |
RegenerationR4 | 0.135 | 3.641 | 0.80113 | 0.98682 | |
RegenerationR5 | -0.108 | 3.641 | 0.80938 | 0.99130 | |
RegenerationR6 | -0.696 | 3.641 | 0.20458 | 0.54654 | |
RegenerationBL | -0.623 | 3.641 | 0.36944 | 0.73779 | |
RegenerationTP | -0.296 | 3.641 | 0.66009 | 0.99368 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_40509 | 462 | 9.63 | Mlig455_049594 | Neo: - Age: Up-Down-Up |
CROCC | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_049594 {REF} {Length: 4171} {Pfam: Leucine-zipper of ternary complex factor MIP1 [PF14389.8, score=176.1]; TATA element modulatory factor 1 TATA binding [PF12325.10, score=150.6]; Protein of unknown function (DUF724) [PF05266.16, score=144.7]; BRE1 E3 ubiquitin ligase [PF08647.13, score=141.0]; Afadin- and alpha -actinin-Binding [PF11559.10, score=137.9]; Crescentin protein [PF19220.2, score=134.7]; SlyX [PF04102.14, score=130.3]; Protein of unknown function (DUF1664) [PF07889.14, score=126.0]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=115.9]; Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=112.0]; Domain of unknown function (DUF5082) [PF16888.7, score=110.9]; Septum formation initiator [PF04977.17, score=110.7]; Ezrin/radixin/moesin family [PF00769.21, score=110.1]; AAA domain [PF13166.8, score=109.8]; Apg6 coiled-coil region [PF17675.3, score=103.5]; Autophagy protein 16 (ATG16) [PF08614.13, score=102.0]; TATA element modulatory factor 1 DNA binding [PF12329.10, score=101.6]; Domain of unknown function (DUF4472) [PF14739.8, score=100.1]; Flagella accessory protein C (FlaC) [PF05377.13, score=97.2]; Baculovirus polyhedron envelope protein, PEP, C terminus [PF04513.14, score=92.8]; Sf6-type phage tail needle knob or tip of some Caudovirales [PF16532.7, score=87.8]; Valyl tRNA synthetase tRNA binding arm [PF10458.11, score=87.6]; Fibrinogen alpha/beta chain family [PF08702.12, score=84.5]; Growth-arrest specific micro-tubule binding [PF13851.8, score=83.1]; Uso1 / p115 like vesicle tethering protein, C terminal region [PF04871.15, score=78.3]; Spc24 subunit of Ndc80 [PF08286.13, score=77.6]; Tropomyosin like [PF12718.9, score=77.1]; ABC transporter C-terminal domain [PF16326.7, score=75.6]; Fez1 [PF06818.17, score=73.0]; Calcium binding and coiled-coil domain (CALCOCO1) like [PF07888.13, score=72.9]; Basic region leucine zipper [PF07716.17, score=71.6]; Plant protein of unknown function (DUF641) [PF04859.14, score=70.4]; gp58-like protein [PF07902.13, score=67.1]; Protein of unknown function (DUF3450) [PF11932.10, score=64.2]; Protein of unknown function DUF16 [PF01519.18, score=63.2]; Leucine zipper [PF15294.8, score=63.0]; Ciliary protein causing Leber congenital amaurosis disease [PF15619.8, score=62.5]; Troponin [PF00992.22, score=59.9]; Protein of unknown function (DUF812) [PF05667.13, score=58.5]; bZIP transcription factor [PF00170.23, score=55.9]; C-terminal leucine zipper domain of cyclic nucleotide-gated channels [PF16526.7, score=52.0]; Myosin tail [PF01576.21, score=50.7]; N-terminal domain of unknown function (DUF4140) [PF13600.8, score=49.6]; Family of unknown function (DUF6262) [PF19776.1, score=49.6]; Centrosomin N-terminal motif 1 [PF07989.13, score=46.9]; Biogenesis of lysosome-related organelles complex-1 subunit 2 [PF10046.11, score=46.7]; Tektin family [PF03148.16, score=39.4]; Golgi transport complex subunit 5 [PF10392.11, score=38.2]; Laminin Domain I [PF06008.16, score=37.3]; Centrosomal protein of 63 kDa [PF17045.7, score=37.1]; GrpE [PF01025.21, score=36.5]; Intermediate filament protein [PF00038.23, score=35.6]; Nsp1-like C-terminal region [PF05064.15, score=34.2]; Haemolysin XhlA [PF10779.11, score=33.9]; Protein of unknown function (DUF1192) [PF06698.13, score=32.9]; Arabidopsis phospholipase-like protein (PEARLI 4) [PF05278.14, score=32.5]; RIM-binding protein of the cytomatrix active zone [PF10174.11, score=27.5]; Microtubule-associated protein 70 [PF07058.13, score=27.3]; Bacterial type III secretion protein (HrpB7) [PF09486.12, score=27.1]; Mechanosensitive ion channel porin domain [PF12795.9, score=25.3]; Domain of unknown function [PF16378.7, score=24.3]; Phosphatidylinositol 3-kinase regulatory subunit P85 inter-SH2 domain [PF16454.7, score=24.3]; Spindle Pole Component 29 [PF17082.7, score=24.0]; Dynamin-like helical domain [PF18709.3, score=22.7]; Centrosome localisation domain of PPC89 [PF14197.8, score=22.6]; Cell division protein ZapB [PF06005.14, score=19.1]; Domain of unknown function (DUF4349) [PF14257.8, score=18.0]} {Human: ENSG00000058453, CROCC, ciliary rootlet coiled-coil, rootletin, [Score=60.5, Expect=2e-08]; ENSG00000102189, EEA1, early endosome antigen 1, [Score=59.7, Expect=3e-08]; ENSG00000115355, CCDC88A, coiled-coil domain containing 88A, [Score=59.3, Expect=3e-08]} {Mouse: ENSMUSG00000034243, Golgb1, golgi autoantigen, golgin subfamily b, macrogolgin 1, [RH, Score=52.4, Expect=3e-06]} {Dmel: FBgn0046323, ORY, Occludin-Related Y, [Score=57.4, Expect=6e-08]} {Celegans: WBGene00022500, lfi-1, Lin-5 (Five) Interacting protein, [Score=70.1, Expect=8e-12]} {Smed: dd_Smed_v6_5291_0_1, dd_Smed_v6_5291_0_1, [Score=74.3, Expect=2e-13]} {RNA1509_35903} {RNA1310_53710.1} {RNA815_27781.1} |
2. | MligTC455_46197 | 1085 | 22.61 | Mlig455_032287, Mlig455_047132, Mlig455_047137, Mlig455_068482 | Neo: - Age: - |
KREMEN2 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_032287 {REF} {Length: 948} {Pfam: WSC domain [PF01822.21, score=59.5]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=56.6, Expect=5e-09]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=68.2, Expect=5e-13]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=57.0, Expect=3e-09]} {RNA1509_59284} {RNA1310_43884} {RNA815_21749.2} Mlig455_047132 {REF} {Length: 1046} {Pfam: WSC domain [PF01822.21, score=60.6]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=48.9, Expect=2e-06]} {Mouse: ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=48.9, Expect=1e-06]; ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=47.4, Expect=5e-06]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=51.6, Expect=2e-07]} {RNA1509_59284} {RNA1310_43884} {RNA815_21749.2} Mlig455_047137 {REF} {Length: 1045} {Pfam: WSC domain [PF01822.21, score=51.2]} {RNA1509_59284} {RNA1310_43884} {RNA815_21749.2} Mlig455_068482 {REF} {Length: 965} {Pfam: WSC domain [PF01822.21, score=57.6]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=52.4, Expect=1e-07]; ENSG00000179314, WSCD1, WSC domain containing 1, [Score=52.4, Expect=2e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=53.5, Expect=4e-08]; ENSMUSG00000040680, Kremen2, kringle containing transmembrane protein 2, [Score=52.4, Expect=1e-07]; ENSMUSG00000020811, Wscd1, WSC domain containing 1, [Score=51.2, Expect=2e-07]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.8, Expect=9e-06]} {RNA1509_59284} {RNA1310_52794.1} {RNA815_21749.1} |
3. | MligTC455_04379 | 234 | 4.87 | Mlig455_056704 | Neo: - Age: Down-Down-Up |
UBR3 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_056704 {REF} {Length: 5714} {Pfam: Proteolysis_6 C-terminal [PF18995.2, score=98.2]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=21.9]; Ring finger domain [PF13639.8, score=20.7]; zinc-RING finger domain [PF14634.8, score=19.2]} {Human: ENSG00000144357, UBR3, ubiquitin protein ligase E3 component n-recognin 3, [Score=113, Expect=3e-25]} {Mouse: ENSMUSG00000044308, Ubr3, ubiquitin protein ligase E3 component n-recognin 3, [Score=79.0, Expect=1e-14]} {Dmel: FBgn0260970, Ubr3, Ubr3 ubiquitin ligase, [Score=91.3, Expect=1e-18]} {Celegans: WBGene00017373, F10G7.10, [Score=51.2, Expect=2e-06]} {Smed: dd_Smed_v6_6166_0_1, dd_Smed_v6_6166_0_1, [Score=90.9, Expect=1e-18]} {RNA1509_51035} {RNA1310_11468} {RNA815_9580} |
4. | MligTC455_45440 | 890 | 18.54 | Mlig455_001967, Mlig455_002069 | Neo: - Age: Down-Up-Down Region-enriched R2: 3.352/0.00000 |
0.954 | - | - | 0.954 | - | - | - | Mlig455_001967 {REF} {Length: 1676} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=70.0]} {Smed: dd_Smed_v6_5359_0_1, dd_Smed_v6_5359_0_1, [Score=94.0, Expect=2e-21]} {RNA1509_22810, RNA1509_34457, RNA1509_38886, RNA1509_41787, RNA1509_55399} {RNA1310_19554.1, RNA1509_22810, RNA1509_34457, RNA1509_38886, RNA1509_41787, RNA1509_55399} {RNA1509_22810, RNA1509_34457, RNA1509_38886, RNA1509_41787, RNA1509_55399, RNA815_11769} Mlig455_002069 {REF} {Length: 1675} {TRANSSPLICED} {Pfam: TIR domain [PF13676.8, score=69.5]} {Smed: dd_Smed_v6_5359_0_2, dd_Smed_v6_5359_0_2, [Score=93.6, Expect=4e-21]} {RNA1509_41787} {RNA1310_19554.1} {RNA815_11769} |
|
5. | MligTC455_50241 | 681 | 14.2 | Mlig455_026783, Mlig455_051797 | Neo: - Age: - |
DCTN1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_026783 {REF} {Length: 5230} {TRANSSPLICED} {Pfam: Dynein associated protein [PF12455.10, score=170.4]; CAP-Gly domain [PF01302.27, score=89.6]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [RH, Score=644, Expect=0.0]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [RH, Score=613, Expect=0.0]} {Dmel: FBgn0001108, DCTN1-p150, Dynactin 1, p150 subunit, [RH, Score=502, Expect=2e-155]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [RH, Score=288, Expect=1e-79]} {Smed: dd_Smed_v6_4065_0_1, dd_Smed_v6_4065_0_1, [RH, Score=487, Expect=5e-151]} {RNA1509_3552} {RNA1310_1904, RNA1509_3552} {RNA1509_3552, RNA815_2756} Mlig455_051797 {REF} {Length: 5181} {TRANSSPLICED} {tRNA: Met(CAT),pseudo, score=24.3} {Pfam: Dynein associated protein [PF12455.10, score=170.7]; CAP-Gly domain [PF01302.27, score=89.6]} {Human: ENSG00000204843, DCTN1, dynactin subunit 1, [RH, Score=642, Expect=0.0]} {Mouse: ENSMUSG00000031865, Dctn1, dynactin 1, [RH, Score=611, Expect=0.0]} {Dmel: FBgn0001108, DCTN1-p150, Dynactin 1, p150 subunit, [RH, Score=503, Expect=1e-155]} {Celegans: WBGene00001017, dnc-1, DyNactin Complex component, [RH, Score=285, Expect=2e-78]} {Smed: dd_Smed_v6_4065_0_1, dd_Smed_v6_4065_0_1, [RH, Score=484, Expect=8e-150]} {RNA1509_3552} {RNA1310_1904} {RNA815_2756} |