M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_04756

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_04756 68 1.42 Mlig455_017448

Neo: -

Age: -

 KCNAB2 Mlig455_017448 {REF} {Length: 3353} {Pfam: Aldo/keto reductase family [PF00248.23, score=176.1]} {Human: ENSG00000069424, KCNAB2, potassium voltage-gated channel subfamily A regulatory beta subunit 2, [Score=411, Expect=7e-141]; ENSG00000169282, KCNAB1, potassium voltage-gated channel subfamily A member regulatory beta subunit 1, [Score=411, Expect=2e-140]; ENSG00000170049, KCNAB3, potassium voltage-gated channel subfamily A regulatory beta subunit 3, [Score=392, Expect=5e-133]} {Mouse: ENSMUSG00000028931, Kcnab2, potassium voltage-gated channel, shaker-related subfamily, beta member 2, [Score=413, Expect=9e-142]; ENSMUSG00000027827, Kcnab1, potassium voltage-gated channel, shaker-related subfamily, beta member 1, [Score=411, Expect=1e-140]} {Dmel: FBgn0263220, Hk, Hyperkinetic, [Score=266, Expect=3e-84]} {Celegans: WBGene00015565, C07D8.6, [Score=57.0, Expect=1e-08]} {RNA1509_11669} {RNA1310_37865} {RNA815_27885}

Cumulative graph for MligTC455_04756

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.769 1.674 0.63251 1.00000
RegionR2 -0.17 1.674 0.91323 1.00000
RegionR3 0.364 1.674 0.71152 1.00000
RegionR4 1.133 1.674 0.32671 0.64460
RegionR5 0.545 1.674 0.58948 0.94756
RegionR6 -1.371 1.674 0.99645 1.00000
RegionR7 -0.172 1.674 0.92059 1.00000
RegionR8 2.44 1.674 0.13689 0.67661

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.452 1.674 0.99983 1.00000
RegenerationR2 0.784 1.674 0.29866 0.74060
RegenerationR3 0.289 1.674 0.76419 0.96932
RegenerationR4 -0.271 1.674 0.72653 0.96352
RegenerationR5 -0.123 1.674 0.85654 1.00000
RegenerationR6 1.272 1.674 0.26989 0.62032
RegenerationBL 0.386 1.674 0.73905 1.00000
RegenerationTP -0.73 1.674 0.62742 0.97574


Genes with expression patterns similar to MligTC455_04756

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_04756 68 1.42 Mlig455_017448

Neo: -

Age: -

 KCNAB2 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_017448 {REF} {Length: 3353} {Pfam: Aldo/keto reductase family [PF00248.23, score=176.1]} {Human: ENSG00000069424, KCNAB2, potassium voltage-gated channel subfamily A regulatory beta subunit 2, [Score=411, Expect=7e-141]; ENSG00000169282, KCNAB1, potassium voltage-gated channel subfamily A member regulatory beta subunit 1, [Score=411, Expect=2e-140]; ENSG00000170049, KCNAB3, potassium voltage-gated channel subfamily A regulatory beta subunit 3, [Score=392, Expect=5e-133]} {Mouse: ENSMUSG00000028931, Kcnab2, potassium voltage-gated channel, shaker-related subfamily, beta member 2, [Score=413, Expect=9e-142]; ENSMUSG00000027827, Kcnab1, potassium voltage-gated channel, shaker-related subfamily, beta member 1, [Score=411, Expect=1e-140]} {Dmel: FBgn0263220, Hk, Hyperkinetic, [Score=266, Expect=3e-84]} {Celegans: WBGene00015565, C07D8.6, [Score=57.0, Expect=1e-08]} {RNA1509_11669} {RNA1310_37865} {RNA815_27885}
2. MligTC455_46850 265 5.52 Mlig455_005746

Neo: -

Age: -

Region-enriched R4: 2.659/0.01708

 1.755 - - - - 0.951 0.804 Mlig455_005746 {REF} {Length: 3392} {Pfam: Coiled-coil domain-containing protein 158 [PF15921.7, score=48.5]} {Mouse: ENSMUSG00000050050, Ccdc158, coiled-coil domain containing 158, [RH, Score=84.7, Expect=3e-16]} {Smed: dd_Smed_v6_10831_0_1, dd_Smed_v6_10831_0_1, [RH, Score=68.9, Expect=1e-11]} {RNA1509_46369, RNA1509_7522} {RNA1310_3662, RNA1509_46369, RNA1509_7522} {RNA1509_46369, RNA1509_7522, RNA815_5689}
3. MligTC455_51954 1404 29.25 Mlig455_038586

Neo: -

Age: -

 0.977 - - - - 0.977 - Mlig455_038586 {REF} {Length: 2052} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.1]} {RNA1509_11900, RNA1509_20653} {RNA1310_15381, RNA1509_11900, RNA1509_20653} {RNA1509_11900, RNA1509_20653, RNA815_5778}
4. MligTC455_51953 781 16.26 Mlig455_038445

Neo: -

Age: Down-Up-Up

 0.975 - - - - 0.975 - Mlig455_038445 {REF} {Length: 1860} {Pfam: Wnt and FGF inhibitory regulator [PF13908.8, score=19.3]} {RNA1509_20653} {RNA1310_15381} {RNA815_5778}
5. MligTC455_17500 206 4.3 Mlig455_058448

Neo: -

Age: logFC(26M/2M)=-0.551

 ANKRD44 0.974 - - - - 0.974 - Mlig455_058448 {REF} {Length: 1455} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=88.8]; Ankyrin repeats (many copies) [PF13637.8, score=74.5]; Ankyrin repeat [PF00023.32, score=52.2]; Ankyrin repeats (many copies) [PF13857.8, score=51.5]; Ankyrin repeat [PF13606.8, score=47.2]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=77.0, Expect=2e-14]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=73.9, Expect=1e-13]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=56.6, Expect=2e-08]} {RNA1509_51450} {RNA1310_16797, RNA1509_51450} {RNA1509_51450, RNA815_9033}
6. MligTC455_20009 4606 95.96 Mlig455_038152, Mlig455_038257

Neo: -

Age: -

Region-enriched R4: 1.035/0.02931

 0.971 - - - - 0.971 -

Mlig455_038152 {REF} {Length: 1064} {Smed: dd_Smed_v6_8141_0_1, dd_Smed_v6_8141_0_1, [RH, Score=94.7, Expect=3e-26]} {RNA1509_10830, RNA1509_16892} {RNA1310_37711, RNA1509_10830} {RNA1509_10830, RNA815_18837}

Mlig455_038257 {REF} {Length: 2711} {Smed: dd_Smed_v6_8141_0_1, dd_Smed_v6_8141_0_1, [RH, Score=94.7, Expect=3e-26]} {RNA1509_16892, RNA1509_40689} {RNA1310_37711, RNA1509_16892, RNA1509_40689} {RNA1509_16892, RNA1509_40689, RNA815_18837}
7. MligTC455_49179 1230 25.62 Mlig455_000575, Mlig455_030372

Neo: -

Age: Down-Up-Down

 GRIK1 0.964 - - - - 0.964 -

Mlig455_000575 {REF} {Length: 3002} {Pfam: Ligand-gated ion channel [PF00060.28, score=56.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=22.4]; Receptor family ligand binding region [PF01094.30, score=21.2]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=76.6, Expect=1e-13]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=73.6, Expect=1e-12]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=73.9, Expect=6e-13]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=73.2, Expect=1e-12]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=66.2, Expect=9e-11]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [Score=71.2, Expect=1e-12]} {RNA1509_5131} {RNA1310_3885, RNA1509_5131} {RNA1509_5131, RNA815_1090.1}

Mlig455_030372 {REF} {Length: 3002} {Pfam: Ligand-gated ion channel [PF00060.28, score=56.2]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=22.5]; Receptor family ligand binding region [PF01094.30, score=21.4]} {Human: ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=76.6, Expect=1e-13]; ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=73.6, Expect=1e-12]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=73.9, Expect=6e-13]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=73.2, Expect=1e-12]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=65.5, Expect=1e-10]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [Score=71.6, Expect=1e-12]} {RNA1509_5131} {RNA1310_3885} {RNA815_1090.1}
8. MligTC455_41181 708 14.76 Mlig455_049760

Neo: -

Age: logFC(26M/2M)=-0.377

Region-enriched R2: 2.010/0.02984

 AK5 0.96 - - - - 0.960 - Mlig455_049760 {REF} {Length: 2835} {TRANSSPLICED} {Pfam: Adenylate kinase [PF00406.24, score=105.1]; AAA domain [PF13207.8, score=87.6]; AAA domain [PF13238.8, score=49.8]; AAA domain [PF13671.8, score=35.6]; IQ calmodulin-binding motif [PF00612.29, score=33.6]; AAA ATPase domain [PF13191.8, score=29.8]; AAA domain [PF13521.8, score=22.3]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=20.4]; AAA domain [PF13245.8, score=20.1]} {Human: ENSG00000154027, AK5, adenylate kinase 5, [RH, Score=223, Expect=6e-64]} {Mouse: ENSMUSG00000039058, Ak5, adenylate kinase 5, [RH, Score=222, Expect=1e-63]} {Dmel: FBgn0032083, CG9541, [RH, Score=109, Expect=1e-24]} {Celegans: WBGene00008746, F13E6.2, [Score=126, Expect=7e-30]} {Smed: dd_Smed_v6_5119_0_1, dd_Smed_v6_5119_0_1, [RH, Score=266, Expect=1e-77]} {RNA1509_14765, RNA1509_30132} {RNA1310_6179.1, RNA1509_14765, RNA1509_30132} {RNA1509_14765, RNA1509_30132, RNA815_3037}
9. MligTC455_17668 1355 28.23 Mlig455_043326, Mlig455_050772

Neo: -

Age: -

 MAPK10 0.959 - - - - 0.959 -

Mlig455_043326 {REF} {Length: 2880} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=206.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.1]; ABC1 atypical kinase-like domain [PF03109.18, score=22.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.7]; RIO1 family [PF01163.24, score=18.5]} {Human: ENSG00000109339, MAPK10, mitogen-activated protein kinase 10, [RH, Score=586, Expect=0.0]; ENSG00000107643, MAPK8, mitogen-activated protein kinase 8, [RH, Score=579, Expect=0.0]; ENSG00000050748, MAPK9, mitogen-activated protein kinase 9, [RH, Score=557, Expect=0.0]} {Mouse: ENSMUSG00000046709, Mapk10, mitogen-activated protein kinase 10, [RH, Score=585, Expect=0.0]; ENSMUSG00000021936, Mapk8, mitogen-activated protein kinase 8, [RH, Score=580, Expect=0.0]; ENSMUSG00000020366, Mapk9, mitogen-activated protein kinase 9, [RH, Score=557, Expect=0.0]} {Dmel: FBgn0000229, bsk, basket, [RH, Score=571, Expect=0.0]} {Celegans: WBGene00002178, jnk-1, Stress-activated protein kinase jnk-1, [RH, Score=556, Expect=0.0]} {Smed: dd_Smed_v6_5924_0_1, dd_Smed_v6_5924_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_15450} {RNA1310_8048.1} {RNA815_5860}

Mlig455_050772 {REF} {Length: 2906} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=206.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.1]; ABC1 atypical kinase-like domain [PF03109.18, score=22.6]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=21.7]; RIO1 family [PF01163.24, score=18.5]} {Human: ENSG00000109339, MAPK10, mitogen-activated protein kinase 10, [RH, Score=586, Expect=0.0]; ENSG00000107643, MAPK8, mitogen-activated protein kinase 8, [RH, Score=579, Expect=0.0]; ENSG00000050748, MAPK9, mitogen-activated protein kinase 9, [RH, Score=559, Expect=0.0]} {Mouse: ENSMUSG00000046709, Mapk10, mitogen-activated protein kinase 10, [RH, Score=585, Expect=0.0]; ENSMUSG00000021936, Mapk8, mitogen-activated protein kinase 8, [RH, Score=580, Expect=0.0]; ENSMUSG00000020366, Mapk9, mitogen-activated protein kinase 9, [RH, Score=560, Expect=0.0]} {Dmel: FBgn0000229, bsk, basket, [RH, Score=570, Expect=0.0]} {Celegans: WBGene00002178, jnk-1, Stress-activated protein kinase jnk-1, [RH, Score=556, Expect=0.0]} {Smed: dd_Smed_v6_5924_0_1, dd_Smed_v6_5924_0_1, [RH, Score=556, Expect=0.0]} {RNA1509_15450} {RNA1310_8048.1, RNA1509_15450} {RNA1509_15450, RNA815_5860}
10. MligTC455_33802 659 13.73 Mlig455_033383

Neo: -

Age: logFC(26M/2M)=-0.359

 0.959 - - - - 0.959 - Mlig455_033383 {REF} {Length: 3524} {RNA1509_14410, RNA1509_56133} {RNA1310_8398, RNA1509_56133} {RNA1509_56133, RNA815_14639}
11. MligTC455_24074 1066 22.21 Mlig455_048222

Neo: -

Age: -

Region-enriched R2: 1.734/0.02628

 0.957 - - - - 0.957 - Mlig455_048222 {REF} {Length: 2364} {Smed: dd_Smed_v6_8763_0_1, dd_Smed_v6_8763_0_1, [RH, Score=101, Expect=1e-23]} {RNA1509_5814} {RNA1310_13945, RNA1509_5814} {RNA1509_5814, RNA815_5072}
12. MligTC455_37308 1663 34.65 Mlig455_040453

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.651

 ARRDC1 0.955 - - - - 0.955 - Mlig455_040453 {REF} {Length: 2316} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=81.2]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=63.8]} {Human: ENSG00000197070, ARRDC1, arrestin domain containing 1, [Score=80.5, Expect=1e-15]; ENSG00000140450, ARRDC4, arrestin domain containing 4, [Score=78.6, Expect=7e-15]} {Mouse: ENSMUSG00000026972, Arrdc1, arrestin domain containing 1, [Score=73.6, Expect=2e-13]} {Dmel: FBgn0035103, Vdup1, Vitamin D[[3]] up-regulated protein 1, [Score=90.9, Expect=1e-19]} {Celegans: WBGene00018060, arrd-18, ARRestin Domain protein, [Score=65.1, Expect=5e-11]} {RNA1509_2401, RNA1509_53571} {RNA1310_27725, RNA1509_53571} {RNA1509_53571, RNA815_11006.1}
13. MligTC455_20230 1282 26.71 Mlig455_003493, Mlig455_015562

Neo: -

Age: logFC(26M/2M)=-0.236

 FAM227A, FAM227B 0.953 - - - - 0.953 -

Mlig455_003493 {REF} {Length: 2231} {TRANSSPLICED} {Pfam: Protein of unknown function [PF14922.8, score=146.0]} {Human: ENSG00000184949, FAM227A, family with sequence similarity 227 member A, [Score=111, Expect=2e-25]} {Mouse: ENSMUSG00000042564, Fam227a, family with sequence similarity 227, member A, [RH, Score=96.7, Expect=8e-21]; ENSMUSG00000027209, Fam227b, family with sequence similarity 227, member B, [RH, Score=93.6, Expect=6e-20]} {Smed: dd_Smed_v6_15102_0_3, dd_Smed_v6_15102_0_3, [Score=157, Expect=3e-42]} {RNA1509_44428} {RNA1310_6983.2} {RNA815_5876}

Mlig455_015562 {REF} {Length: 2171} {TRANSSPLICED} {Pfam: Protein of unknown function [PF14922.8, score=146.7]} {Human: ENSG00000166262, FAM227B, family with sequence similarity 227 member B, [RH, Score=107, Expect=2e-24]} {Mouse: ENSMUSG00000027209, Fam227b, family with sequence similarity 227, member B, [RH, Score=98.6, Expect=1e-21]} {Smed: dd_Smed_v6_15102_0_7, dd_Smed_v6_15102_0_7, [Score=178, Expect=5e-50]} {RNA1509_58462} {RNA1310_11701} {RNA815_12354}
14. MligTC455_43616 1798 37.45 Mlig455_024513

Neo: -

Age: logFC(26M/2M)=-0.338

Region-enriched R2: 1.066/0.02738

 CFAP57 0.953 - - - - 0.953 - Mlig455_024513 {REF} {Length: 5805} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=65.8]; Crescentin protein [PF19220.2, score=26.3]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=25.5]; Autophagy protein 16 (ATG16) [PF08614.13, score=24.0]; Coiled-coil region of CCDC155 or KASH [PF14662.8, score=20.0]} {Human: ENSG00000243710, CFAP57, cilia and flagella associated protein 57, [RH, Score=1363, Expect=0.0]} {Mouse: ENSMUSG00000028730, Cfap57, cilia and flagella associated protein 57, [RH, Score=1360, Expect=0.0]} {Dmel: FBgn0034745, CG4329, [RH, Score=496, Expect=5e-155]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_3323_0_1, dd_Smed_v6_3323_0_1, [RH, Score=1620, Expect=0.0]} {RNA1509_14259, RNA1509_18569, RNA1509_42897, RNA1509_836} {RNA1310_1737, RNA1509_14259, RNA1509_18569, RNA1509_42897} {RNA1509_14259, RNA1509_18569, RNA1509_42897, RNA815_558}
15. MligTC455_42189 996 20.75 Mlig455_049567

Neo: -

Age: -

 ATP1B1 0.952 - - - - 0.952 - Mlig455_049567 {REF} {Length: 2719} {TRANSSPLICED} {Pfam: Sodium / potassium ATPase beta chain [PF00287.20, score=206.6]} {Human: ENSG00000143153, ATP1B1, ATPase Na+/K+ transporting subunit beta 1, [RH, Score=129, Expect=1e-34]} {Mouse: ENSMUSG00000026576, Atp1b1, ATPase, Na+/K+ transporting, beta 1 polypeptide, [RH, Score=130, Expect=2e-35]} {Dmel: FBgn0032946, nrv3, nervana 3, [RH, Score=162, Expect=2e-47]} {Celegans: WBGene00007646, nkb-1, Sodium/potassium-transporting ATPase subunit beta-1, [Score=156, Expect=2e-45]} {Smed: dd_Smed_v6_7917_0_1, dd_Smed_v6_7917_0_1, [Score=228, Expect=1e-73]} {RNA1509_10587, RNA1509_45937} {RNA1310_12857.1, RNA1509_10587, RNA1509_45937} {RNA1509_10587, RNA1509_45937, RNA815_10364}
16. MligTC455_53774 2623 54.65 Mlig455_039561, Mlig455_051366

Neo: -

Age: logFC(26M/2M)=-0.322

Region-enriched R4: 1.262/0.01773

 SPATA6 0.952 - - - - 0.952 -

Mlig455_039561 {REF} {Length: 2532} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=115.4]} {Human: ENSG00000132122, SPATA6, spermatogenesis associated 6, [RH, Score=105, Expect=4e-24]} {Mouse: ENSMUSG00000034401, Spata6, spermatogenesis associated 6, [RH, Score=99.0, Expect=4e-22]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [Score=184, Expect=5e-55]} {RNA1509_28452, RNA1509_48064, RNA1509_8673} {RNA1310_20192, RNA1509_28452, RNA1509_48064} {RNA1509_28452, RNA1509_48064, RNA815_23278}

Mlig455_051366 {REF} {Length: 2585} {TRANSSPLICED} {Pfam: Spermatogenesis-assoc protein 6 [PF14909.8, score=114.8]} {Human: ENSG00000132122, SPATA6, spermatogenesis associated 6, [RH, Score=105, Expect=5e-24]} {Mouse: ENSMUSG00000034401, Spata6, spermatogenesis associated 6, [RH, Score=95.5, Expect=6e-21]} {Smed: dd_Smed_v6_10543_0_1, dd_Smed_v6_10543_0_1, [Score=184, Expect=6e-55]} {RNA1509_32010, RNA1509_32967, RNA1509_8673} {RNA1310_20192, RNA1509_32010, RNA1509_32967, RNA1509_8673} {RNA1509_32010, RNA1509_32967, RNA1509_8673, RNA815_17748}
17. MligTC455_21573 21 0.44 Mlig455_017688, Mlig455_017738

Neo: -

Age: Up-Down-Down

 DICER1 0.951 0.951 - - - - -

Mlig455_017688 {REF} {Length: 5768} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=321.1]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [Score=177, Expect=3e-44]} {RNA1509_6090} {RNA1310_444} {RNA815_30079}

Mlig455_017738 {REF} {Length: 11721} {TRANSSPLICED} {Pfam: RNA dependent RNA polymerase [PF05183.14, score=399.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=98.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=95.4]; Helicase conserved C-terminal domain [PF00271.33, score=63.2]; DEAD/DEAH box helicase [PF00270.31, score=46.5]; Integrase core domain [PF00665.28, score=45.0]; Integrase zinc binding domain [PF17921.3, score=41.9]; Type III restriction enzyme, res subunit [PF04851.17, score=40.8]} {Human: ENSG00000100697, DICER1, dicer 1, ribonuclease III, [Score=99.8, Expect=1e-19]; ENSG00000108771, DHX58, DExH-box helicase 58, [Score=95.5, Expect=9e-19]} {Mouse: ENSMUSG00000041415, Dicer1, dicer 1, ribonuclease type III, [Score=99.8, Expect=7e-20]} {Dmel: FBgn0034246, Dcr-2, Dicer-2, [Score=95.5, Expect=1e-18]} {Celegans: WBGene00004510, rrf-3, RNA-dependent RNA polymerase Family, [RH, Score=212, Expect=3e-54]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=121, Expect=5e-29]} {RNA1509_6090} {RNA1310_444} {RNA815_10889}
18. MligTC455_02159 20 0.41 Mlig455_025396

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_025396 {REF} {Length: 270} {NoTransDecoderORF} {RNA1509_41075} {RNA1310_114067} {RNA815_22193}
19. MligTC455_33249 323 6.73 Mlig455_041967, Mlig455_042041

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_041967 {REF} {Length: 6188} {RNA1509_21815} {RNA1310_798} {RNA815_11352}

Mlig455_042041 {REF} {Length: 6176} {Pfam: Putative DNA-binding domain [PF04326.16, score=20.8]} {RNA1509_21815} {RNA1310_798, RNA1509_21815} {RNA1509_21815, RNA815_11352}
20. MligTC455_50375 2086 43.45 Mlig455_016459, Mlig455_016525, Mlig455_049814

Neo: -

Age: -

 0.95 - - - - 0.950 -

Mlig455_016459 {REF} {Length: 2149} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=23.2]; Ankyrin repeats (many copies) [PF13637.8, score=20.7]} {Smed: dd_Smed_v6_17861_0_1, dd_Smed_v6_17861_0_1, [RH, Score=120, Expect=2e-30]} {RNA1509_10140} {RNA1310_11634.1} {RNA815_4167}

Mlig455_016525 {REF} {Length: 2207} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=23.2]; Ankyrin repeats (many copies) [PF13637.8, score=20.7]} {Smed: dd_Smed_v6_17861_0_1, dd_Smed_v6_17861_0_1, [RH, Score=120, Expect=2e-30]} {RNA1509_10140, RNA1509_60156} {RNA1310_11634.1, RNA1509_10140, RNA1509_60156} {RNA1509_10140, RNA1509_60156, RNA815_4167}

Mlig455_049814 {REF} {Length: 2210} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=23.2]; Ankyrin repeats (many copies) [PF13637.8, score=20.7]} {Smed: dd_Smed_v6_17861_0_1, dd_Smed_v6_17861_0_1, [RH, Score=120, Expect=2e-30]} {RNA1509_10140} {RNA1310_11634.1} {RNA815_4167}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA