TomoSeq data search

Data search

Results for MligTC455_04803

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_04803	92	1.91	Mlig455_052473	Neo: - Age: -	PCDH9	Mlig455_052473 {REF} {Length: 3925} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=253.0]; Cadherin-like [PF16184.7, score=29.2]; Bacterial cadherin-like domain [PF17803.3, score=21.6]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=267, Expect=4e-74]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=266, Expect=2e-73]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=257, Expect=3e-70]} {Dmel: FBgn0284247, ds, dachsous, [Score=208, Expect=3e-54]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=170, Expect=2e-42]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=322, Expect=8e-95]} {RNA1509_28711} {RNA1310_4064, RNA1509_28711} {RNA1509_28711, RNA815_7367}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_04803

1.91

Mlig455_052473

Neo: -

Age: -

PCDH9

Mlig455_052473 {REF} {Length: 3925} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=253.0]; Cadherin-like [PF16184.7, score=29.2]; Bacterial cadherin-like domain [PF17803.3, score=21.6]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=267, Expect=4e-74]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=266, Expect=2e-73]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=257, Expect=3e-70]} {Dmel: FBgn0284247, ds, dachsous, [Score=208, Expect=3e-54]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=170, Expect=2e-42]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=322, Expect=8e-95]} {RNA1509_28711} {RNA1310_4064, RNA1509_28711} {RNA1509_28711, RNA815_7367}

Cumulative graph for MligTC455_04803

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-6.55	1.763	0.13081	0.72968
RegionR2	2.709	1.763	0.05884	0.29201
RegionR3	0.367	1.763	0.69991	1.00000
RegionR4	-2.003	1.763	0.99945	1.00000
RegionR5	0.11	1.763	0.83469	1.00000
RegionR6	1.14	1.763	0.30699	0.89813
RegionR7	0.669	1.763	0.65711	1.00000
RegionR8	3.558	1.763	0.01008	0.18927

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.649	1.763	0.99983	1.00000
RegenerationR2	1.503	1.763	0.12569	0.54840
RegenerationR3	2.831	1.763	0.01133	0.19436
RegenerationR4	1.285	1.763	0.29245	0.73590
RegenerationR5	3.051	1.763	0.00105	0.05373
RegenerationR6	3.213	1.763	0.00209	0.05210
RegenerationBL	3.479	1.763	0.00124	0.02625
RegenerationTP	-3.258	1.763	0.22106	0.66469

Genes with expression patterns similar to MligTC455_04803

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_04803	92	1.91	Mlig455_052473	Neo: - Age: -	PCDH9	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_052473 {REF} {Length: 3925} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=253.0]; Cadherin-like [PF16184.7, score=29.2]; Bacterial cadherin-like domain [PF17803.3, score=21.6]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=267, Expect=4e-74]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=266, Expect=2e-73]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=257, Expect=3e-70]} {Dmel: FBgn0284247, ds, dachsous, [Score=208, Expect=3e-54]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=170, Expect=2e-42]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=322, Expect=8e-95]} {RNA1509_28711} {RNA1310_4064, RNA1509_28711} {RNA1509_28711, RNA815_7367}
2.	MligTC455_07478	55	1.15	Mlig455_052933	Neo: - Age: -		1.85	-	-	-	0.953	0.897	-	Mlig455_052933 {REF} {Length: 294} {NoTransDecoderORF}
3.	MligTC455_08311	59	1.23	Mlig455_027019	Neo: - Age: -		1.818	-	0.861	-	-	-	0.957	Mlig455_027019 {REF} {Length: 696} {NoTransDecoderORF} {RNA1509_42937} {RNA1310_5574.1} {RNA815_27436}
4.	MligTC455_19358	257	5.35	Mlig455_066132	Neo: - Age: - Region-enriched R7: 2.720/0.00219		1.672	-	-	-	0.957	0.715	-	Mlig455_066132 {REF} {Length: 828} {RNA1509_29828} {RNA1310_19258} {RNA815_18075}
5.	MligTC455_42493	77	1.6	Mlig455_033955	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_033955 {REF} {Length: 878} {Smed: dd_Smed_v6_14508_0_1, dd_Smed_v6_14508_0_1, [RH, Score=75.9, Expect=3e-16]} {RNA1310_57572}
6.	MligTC455_43011	161	3.36	Mlig455_039298	Neo: - Age: Up-Up-Down, logFC(26M/2M)=1.332	PPP2R5D	0.962	-	-	-	0.962	-	-	Mlig455_039298 {REF} {Length: 4392} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=346.4]} {Human: ENSG00000112640, PPP2R5D, protein phosphatase 2 regulatory subunit B'delta, [Score=485, Expect=3e-166]; ENSG00000078304, PPP2R5C, protein phosphatase 2 regulatory subunit B'gamma, [Score=466, Expect=2e-159]} {Mouse: ENSMUSG00000059409, Ppp2r5d, protein phosphatase 2, regulatory subunit B', delta, [Score=482, Expect=5e-165]} {Dmel: FBgn0042693, wrd, well-rounded, [Score=451, Expect=2e-153]} {Celegans: WBGene00007554, pptr-2, Protein Phosphatase 2A (Two A) Regulatory subunit, [Score=450, Expect=6e-153]} {Smed: dd_Smed_v6_2613_0_1, dd_Smed_v6_2613_0_1, [Score=464, Expect=2e-158]} {RNA1509_7339} {RNA1310_6432.1} {RNA815_3786}