M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_43011

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_43011 161 3.36 Mlig455_039298

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.332

 PPP2R5D Mlig455_039298 {REF} {Length: 4392} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=346.4]} {Human: ENSG00000112640, PPP2R5D, protein phosphatase 2 regulatory subunit B'delta, [Score=485, Expect=3e-166]; ENSG00000078304, PPP2R5C, protein phosphatase 2 regulatory subunit B'gamma, [Score=466, Expect=2e-159]} {Mouse: ENSMUSG00000059409, Ppp2r5d, protein phosphatase 2, regulatory subunit B', delta, [Score=482, Expect=5e-165]} {Dmel: FBgn0042693, wrd, well-rounded, [Score=451, Expect=2e-153]} {Celegans: WBGene00007554, pptr-2, Protein Phosphatase 2A (Two A) Regulatory subunit, [Score=450, Expect=6e-153]} {Smed: dd_Smed_v6_2613_0_1, dd_Smed_v6_2613_0_1, [Score=464, Expect=2e-158]} {RNA1509_7339} {RNA1310_6432.1} {RNA815_3786}

Cumulative graph for MligTC455_43011

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.493 2.453 0.84041 1.00000
RegionR2 1.096 2.453 0.28356 0.67020
RegionR3 -0.605 2.453 0.47964 0.98254
RegionR4 -0.222 2.453 0.82216 1.00000
RegionR5 0.404 2.453 0.54902 0.91092
RegionR6 0.075 2.453 0.91623 1.00000
RegionR7 -0.558 2.453 0.70034 1.00000
RegionR8 0.302 2.453 0.85105 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.88 2.453 0.67179 1.00000
RegenerationR2 0.15 2.453 0.85712 1.00000
RegenerationR3 2.106 2.453 0.02386 0.27858
RegenerationR4 1.225 2.453 0.14767 0.57480
RegenerationR5 1.476 2.453 0.04773 0.35392
RegenerationR6 1.594 2.453 0.07188 0.33514
RegenerationBL 3.389 2.453 0.00079 0.01952
RegenerationTP 3.146 2.453 0.00467 0.11351


Genes with expression patterns similar to MligTC455_43011

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_43011 161 3.36 Mlig455_039298

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=1.332

 PPP2R5D 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039298 {REF} {Length: 4392} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=346.4]} {Human: ENSG00000112640, PPP2R5D, protein phosphatase 2 regulatory subunit B'delta, [Score=485, Expect=3e-166]; ENSG00000078304, PPP2R5C, protein phosphatase 2 regulatory subunit B'gamma, [Score=466, Expect=2e-159]} {Mouse: ENSMUSG00000059409, Ppp2r5d, protein phosphatase 2, regulatory subunit B', delta, [Score=482, Expect=5e-165]} {Dmel: FBgn0042693, wrd, well-rounded, [Score=451, Expect=2e-153]} {Celegans: WBGene00007554, pptr-2, Protein Phosphatase 2A (Two A) Regulatory subunit, [Score=450, Expect=6e-153]} {Smed: dd_Smed_v6_2613_0_1, dd_Smed_v6_2613_0_1, [Score=464, Expect=2e-158]} {RNA1509_7339} {RNA1310_6432.1} {RNA815_3786}
2. MligTC455_43012 151 3.14 Mlig455_054449

Neo: -

Age: logFC(26M/2M)=-0.432

 PPP2R5D 4.663 0.989 0.983 0.958 - 0.977 0.756 Mlig455_054449 {REF} {Length: 3804} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=588.2]} {Human: ENSG00000112640, PPP2R5D, protein phosphatase 2 regulatory subunit B'delta, [RH, Score=689, Expect=0.0]; ENSG00000078304, PPP2R5C, protein phosphatase 2 regulatory subunit B'gamma, [RH, Score=669, Expect=0.0]} {Mouse: ENSMUSG00000059409, Ppp2r5d, protein phosphatase 2, regulatory subunit B', delta, [RH, Score=686, Expect=0.0]} {Dmel: FBgn0042693, wrd, well-rounded, [RH, Score=655, Expect=0.0]} {Celegans: WBGene00007554, pptr-2, Protein Phosphatase 2A (Two A) Regulatory subunit, [RH, Score=663, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_1, dd_Smed_v6_2613_0_1, [RH, Score=676, Expect=0.0]} {RNA1509_51724, RNA1509_7339} {RNA1310_6432.1, RNA1509_51724} {RNA1509_51724, RNA815_3786}
3. MligTC455_24415 34 0.71 Mlig455_028638

Neo: -

Age: -

Region-enriched R5: 3.666/0.03059

 NFIA 1.792 - - 0.956 0.836 - - Mlig455_028638 {REF} {Length: 4225} {Human: ENSG00000162599, NFIA, nuclear factor I A, [RH, Score=97.8, Expect=3e-20]; ENSG00000147862, NFIB, nuclear factor I B, [RH, Score=96.7, Expect=5e-20]} {Mouse: ENSMUSG00000028565, Nfia, nuclear factor I/A, [RH, Score=97.1, Expect=8e-21]; ENSMUSG00000008575, Nfib, nuclear factor I/B, [RH, Score=96.7, Expect=3e-20]} {Dmel: FBgn0042696, NfI, Nuclear factor I, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00003592, nfi-1, NFI (Nuclear Factor I) family, [Score=101, Expect=2e-21]} {Smed: dd_Smed_v6_7403_0_1, dd_Smed_v6_7403_0_1, [RH, Score=170, Expect=4e-43]} {RNA1509_25355} {RNA1310_4670.1} {RNA815_17090}
4. MligTC455_27375 76 1.58 Mlig455_041864

Neo: -

Age: -

 GTPBP2 1.779 - - 0.960 0.819 - - Mlig455_041864 {REF} {Length: 5786} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=77.0]; Ethanolamine utilisation - propanediol utilisation [PF10662.11, score=22.4]} {Human: ENSG00000172432, GTPBP2, GTP binding protein 2, [Score=409, Expect=4e-134]} {Mouse: ENSMUSG00000023952, Gtpbp2, GTP binding protein 2, [Score=408, Expect=4e-134]} {Dmel: FBgn0037391, CG2017, [Score=361, Expect=5e-116]} {Celegans: WBGene00011449, T04H1.2, [RH, Score=347, Expect=5e-111]} {Smed: dd_Smed_v6_10435_0_1, dd_Smed_v6_10435_0_1, [RH, Score=330, Expect=1e-102]} {RNA1509_56423} {RNA1310_9075, RNA1509_56423} {RNA1509_56423, RNA815_7492}
5. MligTC455_21772 43 0.89 Mlig455_023511, Mlig455_023557

Neo: -

Age: -

 0.985 - - 0.985 - - -

Mlig455_023511 {REF} {Length: 883} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_89227} {RNA815_38499}

Mlig455_023557 {REF} {Length: 631} {NoTransDecoderORF} {RNA1509_2739} {RNA1310_89227} {RNA815_38499}
6. MligTC455_37759 57 1.19 Mlig455_062273

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.387

 0.981 - - 0.981 - - - Mlig455_062273 {REF} {Length: 1687} {RNA1509_19182} {RNA1310_10020, RNA1509_19182} {RNA1509_19182, RNA815_5696}
7. MligTC455_14198 156 3.24 Mlig455_029615, Mlig455_029616, Mlig455_061506, Mlig455_061509, Mlig455_070646

Neo: -

Age: Down-Up-Down

 0.979 - - 0.979 - - -

Mlig455_029615 {REF} {Length: 805} {NoTransDecoderORF} {RNA1310_104227}

Mlig455_029616 {REF} {Length: 323} {NoTransDecoderORF} {RNA1509_4937} {RNA1310_7268} {RNA815_25281}

Mlig455_061506 {REF} {Length: 309} {NoTransDecoderORF} {RNA1509_4937} {RNA1310_7268} {RNA815_25281}

Mlig455_061509 {REF} {Length: 460} {NoTransDecoderORF} {RNA1310_119917}

Mlig455_070646 {REF} {Length: 2408} {NoTransDecoderORF} {RNA1509_4937} {RNA1310_7268} {RNA815_25281}
8. MligTC455_42855 321 6.69 Mlig455_011828

Neo: -

Age: Down-Up-Down

 THAP2 0.979 - - - 0.979 - - Mlig455_011828 {REF} {Length: 2441} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=60.9]} {Human: ENSG00000173451, THAP2, THAP domain containing 2, [Score=52.4, Expect=3e-07]; ENSG00000168152, THAP9, THAP domain containing 9, [Score=52.4, Expect=1e-06]} {Mouse: ENSMUSG00000020137, Thap2, THAP domain containing, apoptosis associated protein 2, [Score=50.8, Expect=6e-07]} {RNA1509_30804} {RNA1310_9675.1} {RNA815_29658}
9. MligTC455_01427 18 0.37 Mlig455_048981

Neo: -

Age: -

 0.978 - - 0.978 - - - Mlig455_048981 {REF} {Length: 598} {RNA1509_16349} {RNA1310_2575}
10. MligTC455_26265 71 1.48 Mlig455_031655

Neo: -

Age: -

Region-enriched R4: 3.585/0.04668

 0.977 - - 0.977 - - - Mlig455_031655 {REF} {Length: 5413} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=46.4]} {RNA1509_59633} {RNA1310_5450.1} {RNA815_7717.1}
11. MligTC455_37998 26 0.55 Mlig455_045732, Mlig455_045786

Neo: -

Age: logFC(26M/2M)=1.008

 PRR9 0.977 - - 0.977 - - -

Mlig455_045732 {REF} {Length: 5496} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.7, Expect=3e-06]} {RNA1310_17667} {RNA815_26670}

Mlig455_045786 {REF} {Length: 1887} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=43.5, Expect=5e-06]} {RNA1310_17667} {RNA815_53757}
12. MligTC455_17025 49 1.01 Mlig455_045610

Neo: -

Age: -

 0.976 - - 0.976 - - - Mlig455_045610 {REF} {Length: 1018} {NoTransDecoderORF} {RNA1509_23329} {RNA1310_24659} {RNA815_61989}
13. MligTC455_29190 1229 25.6 Mlig455_007971, Mlig455_009556, Mlig455_018880, Mlig455_023619, Mlig455_024055, Mlig455_030028, Mlig455_033160, Mlig455_036253, Mlig455_038407, Mlig455_046624, Mlig455_054170, Mlig455_055115, Mlig455_059413, Mlig455_065747, Mlig455_068568, Mlig455_070474

Neo: -

Age: Up-Down-Down

Region-enriched R4: 2.272/0.01373

 0.976 - - 0.976 - - -

Mlig455_007971 {REF} {Length: 2529} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-06]} {RNA1509_9867} {RNA1310_20135} {RNA815_212.1}

Mlig455_009556 {REF} {Length: 2864} {Pfam: Procyclic acidic repetitive protein (PARP) [PF05887.13, score=20.4]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.2}

Mlig455_018880 {REF} {Length: 2577} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_023619 {REF} {Length: 3824} {Dmel: FBgn0029807, CG3108, [Score=54.7, Expect=3e-07]} {RNA1509_13531, RNA1509_39253} {RNA1310_20135, RNA1509_39253} {RNA1509_39253, RNA815_212.1}

Mlig455_024055 {REF} {Length: 3017} {Dmel: FBgn0029807, CG3108, [Score=57.4, Expect=1e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_030028 {REF} {Length: 4001} {RNA1509_13531} {RNA1310_13546} {RNA815_11087.1}

Mlig455_033160 {REF} {Length: 1351} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-07]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.1}

Mlig455_036253 {REF} {Length: 2572} {Dmel: FBgn0029807, CG3108, [Score=60.8, Expect=1e-09]} {RNA1509_13531} {RNA1310_36535} {RNA815_212.1}

Mlig455_038407 {REF} {Length: 907} {Dmel: FBgn0029807, CG3108, [Score=62.8, Expect=5e-11]} {RNA1509_57258} {RNA1310_13546} {RNA815_31604}

Mlig455_046624 {REF} {Length: 2577} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_054170 {REF} {Length: 2186} {Dmel: FBgn0029807, CG3108, [Score=56.2, Expect=9e-08]} {RNA1509_13531} {RNA1310_13546} {RNA815_212.1}

Mlig455_055115 {REF} {Length: 2805} {Dmel: FBgn0029807, CG3108, [Score=58.2, Expect=2e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_059413 {REF} {Length: 2529} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-06]} {RNA1509_9867} {RNA1310_20135} {RNA815_212.1}

Mlig455_065747 {REF} {Length: 1950} {Dmel: FBgn0029807, CG3108, [Score=54.3, Expect=2e-07]} {RNA1509_13531, RNA1509_56942} {RNA1310_13546, RNA1509_56942} {RNA1509_56942, RNA815_31604}

Mlig455_068568 {REF} {Length: 1632} {Dmel: FBgn0029807, CG3108, [Score=54.7, Expect=3e-07]} {RNA1509_13531} {RNA1310_58438} {RNA815_31604}

Mlig455_070474 {REF} {Length: 2731} {Dmel: FBgn0029807, CG3108, [Score=58.2, Expect=2e-08]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}
14. MligTC455_28985 114 2.38 Mlig455_058931

Neo: -

Age: -

 0.975 - - 0.975 - - - Mlig455_058931 {REF} {Length: 5896} {RNA1509_20157} {RNA1310_23482} {RNA815_318.1}
15. MligTC455_29187 133 2.77 Mlig455_018313, Mlig455_030181

Neo: -

Age: -

 0.975 - - 0.975 - - -

Mlig455_018313 {REF} {Length: 2593} {Dmel: FBgn0029807, CG3108, [Score=59.7, Expect=4e-09]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}

Mlig455_030181 {REF} {Length: 4146} {Dmel: FBgn0029807, CG3108, [Score=51.6, Expect=1e-07]} {RNA1509_13531} {RNA1310_20135} {RNA815_212.1}
16. MligTC455_36542 60 1.26 Mlig455_053241, Mlig455_066368

Neo: -

Age: logFC(26M/2M)=0.671

 MFSD8 0.975 - - 0.975 - - -

Mlig455_053241 {REF} {Length: 2620} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.0]; Phosphate regulon sensor protein PhoR [PF11808.10, score=19.6]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]; ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=370, Expect=3e-122]} {RNA1310_19930} {RNA815_20915}

Mlig455_066368 {REF} {Length: 2504} {Pfam: Major Facilitator Superfamily [PF07690.18, score=87.3]; Phosphate regulon sensor protein PhoR [PF11808.10, score=19.7]} {Human: ENSG00000164073, MFSD8, major facilitator superfamily domain containing 8, [Score=58.5, Expect=2e-08]} {Mouse: ENSMUSG00000025759, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]; ENSMUSG00000116169, Mfsd8, major facilitator superfamily domain containing 8, [Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_9883_0_1, dd_Smed_v6_9883_0_1, [RH, Score=371, Expect=3e-123]} {RNA1310_19930} {RNA815_20915}
17. MligTC455_01000 28 0.58 Mlig455_038705

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_038705 {REF} {Length: 427} {NoTransDecoderORF} {RNA1310_30853}
18. MligTC455_07064 5 0.11 Mlig455_046435

Neo: -

Age: -

 0.974 - - 0.974 - - - Mlig455_046435 {REF} {Length: 1865} {RNA1509_59289} {RNA1310_19675, RNA1509_59289}
19. MligTC455_47786 14 0.3 Mlig455_063167

Neo: -

Age: -

 KREMEN1 0.974 - - 0.974 - - - Mlig455_063167 {REF} {Length: 1601} {Pfam: WSC domain [PF01822.21, score=49.1]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=53.1, Expect=2e-07]} {Mouse: ENSMUSG00000020393, Kremen1, kringle containing transmembrane protein 1, [Score=55.8, Expect=2e-08]} {RNA1509_28510} {RNA1310_44003} {RNA815_48857}
20. MligTC455_15477 38 0.78 Mlig455_032839

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.944/0.03018

 0.972 - - 0.972 - - - Mlig455_032839 {REF} {Length: 3814} {NoTransDecoderORF} {RNA1310_94743} {RNA815_50988}
21. MligTC455_52666 321 6.69 Mlig455_044631

Neo: -

Age: -

 0.971 - - - 0.971 - - Mlig455_044631 {REF} {Length: 2981} {TRANSSPLICED} {Smed: dd_Smed_v6_1383_0_1, dd_Smed_v6_1383_0_1, [RH, Score=68.2, Expect=7e-12]} {RNA1509_25962} {RNA1310_4426.1, RNA1509_25962} {RNA1509_25962, RNA815_13169.1}
22. MligTC455_10526 30 0.63 Mlig455_034032

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_034032 {REF} {Length: 2620} {NoTransDecoderORF} {RNA1310_55520} {RNA815_23630}
23. MligTC455_10906 18 0.38 Mlig455_034473

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_034473 {REF} {Length: 1571} {RNA1509_25022} {RNA1310_121238} {RNA815_3404}
24. MligTC455_13442 25 0.52 Mlig455_016258

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_016258 {REF} {Length: 1815} {NoTransDecoderORF} {tRNA: Val(CAC),pseudo, score=22.2} {RNA1509_45595} {RNA1310_43553} {RNA815_31207}
25. MligTC455_14603 15 0.31 Mlig455_012376

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_012376 {REF} {Length: 271} {NoTransDecoderORF}
26. MligTC455_31248 69 1.45 Mlig455_022852

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.396

 GABBR2 0.97 - - 0.970 - - - Mlig455_022852 {REF} {Length: 3570} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=161.8]; Receptor family ligand binding region [PF01094.30, score=99.7]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=231, Expect=2e-63]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=228, Expect=1e-62]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=221, Expect=6e-60]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=209, Expect=1e-56]} {Smed: dd_Smed_v6_51663_0_1, dd_Smed_v6_51663_0_1, [Score=131, Expect=5e-34]} {RNA1509_26993} {RNA1310_7927.1} {RNA815_4866.1}
27. MligTC455_37265 26 0.54 Mlig455_051191

Neo: -

Age: -

 0.97 - - 0.970 - - - Mlig455_051191 {REF} {Length: 2131} {NoTransDecoderORF} {RNA1509_14974} {RNA1310_140699} {RNA815_3983}
28. MligTC455_33448 77 1.61 Mlig455_023212, Mlig455_037490, Mlig455_053804

Neo: -

Age: Down-Up-Down

Region-enriched R2: 4.691/0.03915

 0.966 - - 0.966 - - -

Mlig455_023212 {REF} {Length: 2266} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=30.6]; DNA polymerase type B, organellar and viral [PF03175.15, score=25.4]} {Celegans: WBGene00016348, C33E10.6, [Score=216, Expect=4e-59]} {Smed: dd_Smed_v6_9974_1_5, dd_Smed_v6_9974_1_5, [Score=200, Expect=4e-55]} {RNA1509_26772} {RNA1310_4650} {RNA815_24522}

Mlig455_037490 {REF} {Length: 4620} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=27.4]} {Celegans: WBGene00022511, ZC53.4, [Score=243, Expect=3e-65]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [RH, Score=527, Expect=7e-170]} {RNA1509_26772} {RNA1310_4650, RNA1509_26772} {RNA1509_26772, RNA815_12457}

Mlig455_053804 {REF} {Length: 4594} {TRANSSPLICED} {Pfam: Recombination endonuclease VII [PF02945.17, score=27.7]} {Celegans: WBGene00022511, ZC53.4, [Score=245, Expect=6e-66]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [RH, Score=532, Expect=8e-172]} {RNA1509_26772} {RNA1310_4650} {RNA815_12457}
29. MligTC455_53931 61 1.27 Mlig455_058086

Neo: -

Age: -

Region-enriched R1: 12.708/0.03767
Region-enriched R4: 6.554/0.00071

 0.966 - - 0.966 - - - Mlig455_058086 {REF} {Length: 1694} {RNA1509_58937} {RNA1310_36718} {RNA815_16626}
30. MligTC455_07851 152 3.16 Mlig455_000950

Neo: -

Age: -

Region-enriched R4: 5.566/0.00142

 0.965 - - 0.965 - - - Mlig455_000950 {REF} {Length: 404} {NoTransDecoderORF}
31. MligTC455_09991 211 4.4 Mlig455_059332

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=0.572

 0.963 - - 0.963 - - - Mlig455_059332 {REF} {Length: 1628} {Smed: dd_Smed_v6_298_0_1, dd_Smed_v6_298_0_1, [RH, Score=50.8, Expect=6e-10]} {RNA1509_29754} {RNA1310_57531} {RNA815_33323}
32. MligTC455_04803 92 1.91 Mlig455_052473

Neo: -

Age: -

 PCDH9 0.962 - - - 0.962 - - Mlig455_052473 {REF} {Length: 3925} {TRANSSPLICED} {Pfam: Cadherin domain [PF00028.19, score=253.0]; Cadherin-like [PF16184.7, score=29.2]; Bacterial cadherin-like domain [PF17803.3, score=21.6]} {Human: ENSG00000184226, PCDH9, protocadherin 9, [Score=267, Expect=4e-74]} {Mouse: ENSMUSG00000055421, Pcdh9, protocadherin 9, [Score=266, Expect=2e-73]; ENSMUSG00000034755, Pcdh11x, protocadherin 11 X-linked, [Score=257, Expect=3e-70]} {Dmel: FBgn0284247, ds, dachsous, [Score=208, Expect=3e-54]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=170, Expect=2e-42]} {Smed: dd_Smed_v6_17019_0_1, dd_Smed_v6_17019_0_1, [Score=322, Expect=8e-95]} {RNA1509_28711} {RNA1310_4064, RNA1509_28711} {RNA1509_28711, RNA815_7367}
33. MligTC455_37038 373 7.77 Mlig455_008501, Mlig455_017051, Mlig455_037981, Mlig455_052966, Mlig455_056998, Mlig455_057057, Mlig455_057072

Neo: -

Age: -

Region-enriched R4: 4.441/0.01238

 0.962 - - 0.962 - - -

Mlig455_008501 {REF} {Length: 1509} {NoTransDecoderORF} {RNA1509_56148} {RNA1310_52327} {RNA815_48299}

Mlig455_017051 {REF} {Length: 1884} {NoTransDecoderORF} {RNA1509_53350} {RNA1310_45417} {RNA815_48299}

Mlig455_037981 {REF} {Length: 160} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_82877.3} {RNA815_48299}

Mlig455_052966 {REF} {Length: 890} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_45417} {RNA815_48299}

Mlig455_056998 {REF} {Length: 919} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_45417} {RNA815_48299}

Mlig455_057057 {REF} {Length: 530} {RNA1509_53350} {RNA1310_82877.2} {RNA815_48299}

Mlig455_057072 {REF} {Length: 945} {RNA1509_53350} {RNA1310_45417} {RNA815_48299}
34. MligTC455_09580 19 0.4 Mlig455_010996

Neo: -

Age: -

 0.961 - - 0.961 - - - Mlig455_010996 {REF} {Length: 1464} {NoTransDecoderORF} {RNA1310_106744} {RNA815_31856}
35. MligTC455_26175 77 1.61 Mlig455_001462, Mlig455_004850, Mlig455_030045, Mlig455_039017

Neo: -

Age: -

Region-enriched R2: 5.289/0.03235

 NYNRIN 0.959 - - 0.959 - - -

Mlig455_001462 {REF} {Length: 3779} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_004850 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.3]; Integrase core domain [PF00665.28, score=49.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.5]; Aspartyl protease [PF13650.8, score=33.1]; Retroviral aspartyl protease [PF00077.22, score=19.5]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=77.0, Expect=2e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=8e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=271, Expect=2e-75]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}

Mlig455_030045 {REF} {Length: 4782} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.6]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=49.6]; gag-polyprotein putative aspartyl protease [PF13975.8, score=44.5]; Aspartyl protease [PF13650.8, score=32.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=78.6, Expect=5e-14]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=77.8, Expect=6e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=265, Expect=5e-74]} {RNA1509_38388, RNA1509_56442} {RNA1310_4763.1, RNA1509_38388, RNA1509_56442} {RNA1509_38388, RNA1509_56442, RNA815_16141}

Mlig455_039017 {REF} {Length: 4349} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=101.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=96.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=70.1]; Integrase zinc binding domain [PF17921.3, score=52.5]; Integrase core domain [PF00665.28, score=48.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=45.7]; Aspartyl protease [PF13650.8, score=32.2]; Retroviral aspartyl protease [PF00077.22, score=19.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=76.6, Expect=3e-13]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=76.6, Expect=2e-13]; ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=73.6, Expect=2e-12]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=268, Expect=2e-74]} {RNA1509_38388} {RNA1310_4763.1} {RNA815_16141}
36. MligTC455_32576 34 0.71 Mlig455_000620

Neo: -

Age: -

 0.959 - - 0.959 - - - Mlig455_000620 {REF} {Length: 2527} {NoTransDecoderORF} {RNA1509_58448} {RNA1310_87871} {RNA815_2684.1}
37. MligTC455_34214 66 1.37 Mlig455_027682

Neo: -

Age: -

 0.957 - - 0.957 - - - Mlig455_027682 {REF} {Length: 285} {RNA1509_30941} {RNA1310_82283} {RNA815_19376}
38. MligTC455_10493 81 1.69 Mlig455_004006, Mlig455_004088

Neo: -

Age: Up-Down-Down

 0.956 - - 0.956 - - -

Mlig455_004006 {REF} {Length: 3636} {RNA1509_5254} {RNA1310_52867.1} {RNA815_44736}

Mlig455_004088 {REF} {Length: 1590} {RNA1509_10236} {RNA1310_52867.1} {RNA815_44736}
39. MligTC455_29537 394 8.21 Mlig455_037986, Mlig455_043226, Mlig455_043771, Mlig455_044190, Mlig455_068627

Neo: -

Age: -

 0.956 - - 0.956 - - -

Mlig455_037986 {REF} {Length: 729} {RNA1310_48817} {RNA815_318.1}

Mlig455_043226 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1}

Mlig455_043771 {REF} {Length: 5753} {RNA1509_40552, RNA1509_57189} {RNA1310_1374.1, RNA1509_40552, RNA1509_57189} {RNA1509_40552, RNA1509_57189, RNA815_318.1}

Mlig455_044190 {REF} {Length: 804} {NoTransDecoderORF} {RNA1509_57867} {RNA1310_1374.1} {RNA815_43995.1}

Mlig455_068627 {REF} {Length: 1191} {NoTransDecoderORF} {RNA1509_40552} {RNA1310_48817} {RNA815_48299}
40. MligTC455_08866 45 0.93 Mlig455_065686

Neo: -

Age: Up-Down-Up

 0.954 - - 0.954 - - - Mlig455_065686 {REF} {Length: 4864} {TRANSSPLICED} {RNA1509_47916} {RNA1310_26797} {RNA815_42098}
41. MligTC455_25226 35 0.72 Mlig455_023978

Neo: -

Age: Up-Down-Down

 0.954 - - 0.954 - - - Mlig455_023978 {REF} {Length: 5232} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=23.1]} {RNA1509_49686} {RNA1310_5450.1} {RNA815_16253.2}
42. MligTC455_28886 479 9.97 Mlig455_007371, Mlig455_017980, Mlig455_051928, Mlig455_058107

Neo: -

Age: -

 0.954 - - - 0.954 - -

Mlig455_007371 {REF} {Length: 5258} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=142.4]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=5e-111]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2}

Mlig455_017980 {REF} {Length: 5136} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=140.4]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=380, Expect=3e-110]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2}

Mlig455_051928 {REF} {Length: 5411} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=140.5]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=379, Expect=4e-110]} {RNA1509_52872} {RNA1310_2280.1} {RNA815_694.2}

Mlig455_058107 {REF} {Length: 7867} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=134.3]} {Celegans: WBGene00007723, C25F9.2, [RH, Score=381, Expect=1e-110]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2}
43. MligTC455_32859 280 5.83 Mlig455_055206

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_055206 {REF} {Length: 1588} {TRANSSPLICED} {Pfam: Nucleolar and spindle-associated protein [PF16006.7, score=49.6]} {RNA1509_35887} {RNA1310_11141.1} {RNA815_19948}
44. MligTC455_04677 13 0.27 Mlig455_038295

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_038295 {REF} {Length: 672} {NoTransDecoderORF} {RNA1310_81030.1} {RNA815_40846}
45. MligTC455_08599 133 2.76 Mlig455_004269, Mlig455_004339

Neo: -

Age: -

 0.953 - - 0.953 - - -

Mlig455_004269 {REF} {Length: 1241} {NoTransDecoderORF}

Mlig455_004339 {REF} {Length: 1394} {NoTransDecoderORF}
46. MligTC455_08633 45 0.93 Mlig455_012424

Neo: -

Age: -

Region-enriched R4: 6.767/0.01731

 0.953 - - 0.953 - - - Mlig455_012424 {REF} {Length: 975} {TRANSSPLICED} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
47. MligTC455_27005 82 1.71 Mlig455_033683

Neo: -

Age: -

Region-enriched R5: 2.532/0.01411

 KLHDC8A 0.953 - - 0.953 - - - Mlig455_033683 {REF} {Length: 1355} {TRANSSPLICED} {Pfam: Kelch motif [PF01344.27, score=31.3]; Kelch motif [PF13964.8, score=25.6]; Kelch motif [PF13854.8, score=20.2]} {Human: ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=58.5, Expect=3e-09]; ENSG00000185909, KLHDC8B, kelch domain containing 8B, [Score=58.2, Expect=4e-09]} {Mouse: ENSMUSG00000032609, Klhdc8b, kelch domain containing 8B, [Score=60.5, Expect=4e-10]; ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=59.3, Expect=1e-09]} {RNA1509_20477} {RNA1310_11616} {RNA815_11073}
48. MligTC455_45246 18 0.38 Mlig455_011863

Neo: -

Age: -

 NLK 0.953 - - 0.953 - - - Mlig455_011863 {REF} {Length: 5776} {Pfam: Protein kinase domain [PF00069.27, score=208.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=94.9]; ABC1 atypical kinase-like domain [PF03109.18, score=19.9]; Fungal protein kinase [PF17667.3, score=19.4]} {Human: ENSG00000087095, NLK, nemo like kinase, [RH, Score=444, Expect=1e-150]} {Mouse: ENSMUSG00000017376, Nlk, nemo like kinase, [RH, Score=444, Expect=7e-151]} {Dmel: FBgn0011817, nmo, nemo, [RH, Score=450, Expect=1e-154]} {Celegans: WBGene00003048, lit-1, Serine/threonine kinase NLK, [RH, Score=394, Expect=9e-130]} {Smed: dd_Smed_v6_4172_0_3, dd_Smed_v6_4172_0_3, [RH, Score=431, Expect=1e-146]} {RNA1509_6933} {RNA1310_7196.1} {RNA815_3487.2}
49. MligTC455_47473 14 0.3 Mlig455_042900, Mlig455_049509

Neo: -

Age: -

Region-enriched R2: 6.269/0.00629

 0.953 - - 0.953 - - -

Mlig455_042900 {REF} {Length: 3422} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=131.9]} {Celegans: WBGene00009073, delm-1, DEgenerin Linked to Mechanosensation, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_37545_0_1, dd_Smed_v6_37545_0_1, [Score=47.8, Expect=1e-05]} {RNA1509_56568} {RNA1310_46503} {RNA815_41074}

Mlig455_049509 {REF} {Length: 2959} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=132.9]} {Smed: dd_Smed_v6_37545_0_1, dd_Smed_v6_37545_0_1, [Score=47.8, Expect=1e-05]} {RNA1509_56568} {RNA1310_46503, RNA1509_56568} {RNA1509_56568, RNA815_41074}
50. MligTC455_50127 35 0.72 Mlig455_023035, Mlig455_023136, Mlig455_023196

Neo: -

Age: Down-Up-Down

Region-enriched R4: 9.888/0.00068

 0.953 - - 0.953 - - -

Mlig455_023035 {REF} {Length: 413} {NoTransDecoderORF} {RNA1509_22081} {RNA1310_7070} {RNA815_10540}

Mlig455_023136 {REF} {Length: 413} {NoTransDecoderORF} {RNA1509_22081} {RNA1310_7070} {RNA815_10540}

Mlig455_023196 {REF} {Length: 325} {NoTransDecoderORF} {RNA1509_22081} {RNA1310_7070} {RNA815_10540}
51. MligTC455_53267 296 6.17 Mlig455_012795

Neo: Irradiation

Age: -

 CDC5L 0.953 - - - - 0.953 - Mlig455_012795 {REF} {Length: 2369} {Pfam: pre-mRNA splicing factor component [PF11831.10, score=68.2]; WSC domain [PF01822.21, score=57.6]} {Human: ENSG00000096401, CDC5L, cell division cycle 5 like, [Score=219, Expect=3e-63]} {Mouse: ENSMUSG00000023932, Cdc5l, cell division cycle 5-like (S. pombe), [Score=216, Expect=2e-62]; ENSMUSG00000112252, Gm32802, predicted gene, 32802, [Score=216, Expect=2e-62]; ENSMUSG00000112216, Gm32717, predicted gene, 32717, [Score=216, Expect=2e-62]} {Dmel: FBgn0265574, Cdc5, Cell division cycle 5, [Score=199, Expect=2e-56]} {Celegans: WBGene00008386, cdc-5L, Cell Division Cycle related, [Score=108, Expect=3e-25]} {Smed: dd_Smed_v6_4163_0_1, dd_Smed_v6_4163_0_1, [Score=164, Expect=5e-44]} {RNA1509_47678} {RNA1310_5017} {RNA815_19593}
52. MligTC455_06941 19 0.4 Mlig455_062113

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_062113 {REF} {Length: 448} {NoTransDecoderORF} {RNA1509_36341} {RNA1310_8709} {RNA815_721.1}
53. MligTC455_45930 50 1.04 Mlig455_054857

Neo: -

Age: -

 0.952 - - 0.952 - - - Mlig455_054857 {REF} {Length: 405} {NoTransDecoderORF}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA