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Data search

Results for MligTC455_05040

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_05040	960	20.00	Mlig455_016579, Mlig455_016634, Mlig455_035607	Neo: - Age: -	KCND2	Mlig455_016579 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.8]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.9]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=731, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=766, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=733, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132, RNA1509_34837} {RNA1310_4146.2, RNA1509_13132, RNA1509_34837} {RNA1509_13132, RNA1509_34837, RNA815_997} Mlig455_016634 {REF} {Length: 3226} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.7]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.8]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=729, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=732, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997} Mlig455_035607 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=92.5]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=49.6]; BTB/POZ domain [PF16017.7, score=23.2]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=378, Expect=1e-128]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=372, Expect=7e-126]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=378, Expect=2e-128]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=372, Expect=4e-126]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=375, Expect=2e-129]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=358, Expect=1e-121]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=366, Expect=2e-123]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_05040

960

20.00

Mlig455_016579, Mlig455_016634, Mlig455_035607

Neo: -

Age: -

KCND2

Mlig455_016579 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.8]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.9]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=731, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=766, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=733, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132, RNA1509_34837} {RNA1310_4146.2, RNA1509_13132, RNA1509_34837} {RNA1509_13132, RNA1509_34837, RNA815_997}

Mlig455_016634 {REF} {Length: 3226} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.7]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.8]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=729, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=732, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}

Mlig455_035607 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=92.5]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=49.6]; BTB/POZ domain [PF16017.7, score=23.2]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=378, Expect=1e-128]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=372, Expect=7e-126]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=378, Expect=2e-128]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=372, Expect=4e-126]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=375, Expect=2e-129]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=358, Expect=1e-121]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=366, Expect=2e-123]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}

Cumulative graph for MligTC455_05040

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.342	4.672	0.77027	1.00000
RegionR2	0.309	4.672	0.50148	0.88083
RegionR3	-0.523	4.672	0.18255	0.71508
RegionR4	0.084	4.672	0.84563	1.00000
RegionR5	0.403	4.672	0.21844	0.51935
RegionR6	0.562	4.672	0.11524	0.61961
RegionR7	0.092	4.672	0.84716	1.00000
RegionR8	-0.585	4.672	0.40740	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-2.206	4.672	0.28085	0.98107
RegenerationR2	0.618	4.672	0.08119	0.45881
RegenerationR3	0.488	4.672	0.24532	0.67929
RegenerationR4	-0.47	4.672	0.27055	0.71658
RegenerationR5	-0.213	4.672	0.56616	0.89448
RegenerationR6	-0.308	4.672	0.42992	0.75800
RegenerationBL	0.478	4.672	0.32515	0.69186
RegenerationTP	-0.118	4.672	0.84172	1.00000

Genes with expression patterns similar to MligTC455_05040

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_05040	960	20	Mlig455_016579, Mlig455_016634, Mlig455_035607	Neo: - Age: -	KCND2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_016579 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.8]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.9]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=731, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=766, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=733, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132, RNA1509_34837} {RNA1310_4146.2, RNA1509_13132, RNA1509_34837} {RNA1509_13132, RNA1509_34837, RNA815_997} Mlig455_016634 {REF} {Length: 3226} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.7]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.8]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=729, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=732, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997} Mlig455_035607 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=92.5]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=49.6]; BTB/POZ domain [PF16017.7, score=23.2]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=378, Expect=1e-128]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=372, Expect=7e-126]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=378, Expect=2e-128]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=372, Expect=4e-126]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=375, Expect=2e-129]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=358, Expect=1e-121]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=366, Expect=2e-123]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}
2.	MligTC455_05039	320	6.67	Mlig455_035597	Neo: - Age: Up-Down-Up	KCND1	5.862	0.903	0.999	0.996	0.997	0.999	0.968	Mlig455_035597 {REF} {Length: 3227} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=85.6]; Ion channel [PF07885.18, score=50.8]; Domain of unknown function (DUF3399) [PF11879.10, score=38.6]} {Human: ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [Score=261, Expect=3e-81]; ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=258, Expect=2e-80]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=249, Expect=1e-76]} {Mouse: ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [Score=261, Expect=3e-81]; ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=258, Expect=4e-80]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=249, Expect=7e-77]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=275, Expect=1e-87]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=270, Expect=2e-85]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=245, Expect=3e-75]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}
3.	MligTC455_05041	318	6.63	Mlig455_051885	Neo: - Age: -		5.861	0.904	0.998	0.996	0.996	1.000	0.967	Mlig455_051885 {REF} {Length: 633} {NoTransDecoderORF} {RNA1509_34837} {RNA1310_4146.2} {RNA815_997}
4.	MligTC455_33707	211	4.4	Mlig455_018361	Neo: - Age: -	XRRA1	1.694	-	-	-	0.951	-	0.743	Mlig455_018361 {REF} {Length: 3845} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=41.5]; Leucine rich repeat [PF13855.8, score=28.9]} {Human: ENSG00000166435, XRRA1, X-ray radiation resistance associated 1, [RH, Score=167, Expect=1e-45]} {Mouse: ENSMUSG00000035211, Xrra1, X-ray radiation resistance associated 1, [RH, Score=171, Expect=1e-43]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=63.9, Expect=7e-10]} {Smed: dd_Smed_v6_13519_0_1, dd_Smed_v6_13519_0_1, [RH, Score=154, Expect=3e-38]} {RNA1509_45583} {RNA1310_16743.1} {RNA815_17679}
5.	MligTC455_46892	510	10.61	Mlig455_024306, Mlig455_024361	Neo: - Age: -	RAB8B	0.955	-	-	-	0.955	-	-	Mlig455_024306 {REF} {Length: 1532} {Pfam: Ras family [PF00071.24, score=212.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=118.0]; ADP-ribosylation factor family [PF00025.23, score=77.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.4]; 50S ribosome-binding GTPase [PF01926.25, score=23.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=23.5]; RsgA GTPase [PF03193.18, score=22.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=257, Expect=4e-87]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=254, Expect=1e-85]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=256, Expect=6e-87]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=254, Expect=4e-86]} {Dmel: FBgn0262518, Rab8, [Score=245, Expect=1e-82]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=248, Expect=8e-84]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=251, Expect=2e-85]} {RNA1509_53476} {RNA1310_24855} {RNA815_9980.1} Mlig455_024361 {REF} {Length: 1538} {Pfam: Ras family [PF00071.24, score=212.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=118.0]; ADP-ribosylation factor family [PF00025.23, score=77.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.4]; 50S ribosome-binding GTPase [PF01926.25, score=23.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=23.5]; RsgA GTPase [PF03193.18, score=22.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=257, Expect=4e-87]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=254, Expect=1e-85]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=256, Expect=6e-87]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=254, Expect=4e-86]} {Dmel: FBgn0262518, Rab8, [Score=245, Expect=1e-82]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=248, Expect=8e-84]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=251, Expect=2e-85]} {RNA1509_53476} {RNA1310_24855, RNA1509_53476} {RNA1509_53476, RNA815_9980.1}