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Results for MligTC455_05039

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_05039 320 6.67 Mlig455_035597

Neo: -

Age: Up-Down-Up

 KCND1 Mlig455_035597 {REF} {Length: 3227} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=85.6]; Ion channel [PF07885.18, score=50.8]; Domain of unknown function (DUF3399) [PF11879.10, score=38.6]} {Human: ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [Score=261, Expect=3e-81]; ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=258, Expect=2e-80]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=249, Expect=1e-76]} {Mouse: ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [Score=261, Expect=3e-81]; ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=258, Expect=4e-80]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=249, Expect=7e-77]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=275, Expect=1e-87]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=270, Expect=2e-85]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=245, Expect=3e-75]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}

Cumulative graph for MligTC455_05039

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.322 3.297 0.86455 1.00000
RegionR2 0.337 3.297 0.57887 0.93567
RegionR3 -0.626 3.297 0.25836 0.80212
RegionR4 0.1 3.297 0.85114 1.00000
RegionR5 0.438 3.297 0.29430 0.62741
RegionR6 0.539 3.297 0.25656 0.84248
RegionR7 0.117 3.297 0.87120 1.00000
RegionR8 -0.585 3.297 0.59910 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.156 3.297 0.52026 1.00000
RegenerationR2 0.569 3.297 0.12298 0.54388
RegenerationR3 0.662 3.297 0.18209 0.61870
RegenerationR4 -0.495 3.297 0.30880 0.74949
RegenerationR5 -0.176 3.297 0.64803 0.93143
RegenerationR6 -0.132 3.297 0.75971 0.95665
RegenerationBL 0.141 3.297 0.83764 1.00000
RegenerationTP -0.148 3.297 0.86845 1.00000


Genes with expression patterns similar to MligTC455_05039

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_05039 320 6.67 Mlig455_035597

Neo: -

Age: Up-Down-Up

 KCND1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_035597 {REF} {Length: 3227} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=85.6]; Ion channel [PF07885.18, score=50.8]; Domain of unknown function (DUF3399) [PF11879.10, score=38.6]} {Human: ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [Score=261, Expect=3e-81]; ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=258, Expect=2e-80]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=249, Expect=1e-76]} {Mouse: ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [Score=261, Expect=3e-81]; ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=258, Expect=4e-80]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=249, Expect=7e-77]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=275, Expect=1e-87]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=270, Expect=2e-85]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=245, Expect=3e-75]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}
2. MligTC455_05041 318 6.63 Mlig455_051885

Neo: -

Age: -

 5.992 0.997 0.999 1.000 0.998 1.000 0.998 Mlig455_051885 {REF} {Length: 633} {NoTransDecoderORF} {RNA1509_34837} {RNA1310_4146.2} {RNA815_997}
3. MligTC455_05040 960 20 Mlig455_016579, Mlig455_016634, Mlig455_035607

Neo: -

Age: -

 KCND2 5.862 0.903 0.999 0.996 0.997 0.999 0.968

Mlig455_016579 {REF} {Length: 3221} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.8]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.9]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=731, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=766, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=733, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132, RNA1509_34837} {RNA1310_4146.2, RNA1509_13132, RNA1509_34837} {RNA1509_13132, RNA1509_34837, RNA815_997}

Mlig455_016634 {REF} {Length: 3226} {TRANSSPLICED} {Pfam: Ion transport protein [PF00520.33, score=126.7]; BTB/POZ domain [PF02214.24, score=90.7]; Ion channel [PF07885.18, score=51.1]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=48.8]; Domain of unknown function (DUF3399) [PF11879.10, score=45.5]; BTB/POZ domain [PF16017.7, score=20.9]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [RH, Score=737, Expect=0.0]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [RH, Score=729, Expect=0.0]; ENSG00000102057, KCND1, potassium voltage-gated channel subfamily D member 1, [RH, Score=702, Expect=0.0]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [RH, Score=736, Expect=0.0]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [RH, Score=730, Expect=0.0]; ENSMUSG00000009731, Kcnd1, potassium voltage-gated channel, Shal-related family, member 1, [RH, Score=707, Expect=0.0]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [RH, Score=764, Expect=0.0]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [RH, Score=732, Expect=0.0]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [RH, Score=721, Expect=0.0]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}

Mlig455_035607 {REF} {Length: 3222} {TRANSSPLICED} {Pfam: BTB/POZ domain [PF02214.24, score=92.5]; Shal-type voltage-gated potassium channels, N-terminal [PF11601.10, score=49.6]; BTB/POZ domain [PF16017.7, score=23.2]} {Human: ENSG00000184408, KCND2, potassium voltage-gated channel subfamily D member 2, [Score=378, Expect=1e-128]; ENSG00000171385, KCND3, potassium voltage-gated channel subfamily D member 3, [Score=372, Expect=7e-126]} {Mouse: ENSMUSG00000060882, Kcnd2, potassium voltage-gated channel, Shal-related family, member 2, [Score=378, Expect=2e-128]; ENSMUSG00000040896, Kcnd3, potassium voltage-gated channel, Shal-related family, member 3, [Score=372, Expect=4e-126]} {Dmel: FBgn0005564, Shal, Shaker cognate l, [Score=375, Expect=2e-129]} {Celegans: WBGene00022240, shl-1, SHaL family of potassium channels, [Score=358, Expect=1e-121]} {Smed: dd_Smed_v6_15876_0_1, dd_Smed_v6_15876_0_1, [Score=366, Expect=2e-123]} {RNA1509_13132} {RNA1310_4146.2} {RNA815_997}
4. MligTC455_44084 235 4.9 Mlig455_011457

Neo: -

Age: -

 FLCN 1.779 - - - 0.828 - 0.951 Mlig455_011457 {REF} {Length: 5279} {TRANSSPLICED} {Pfam: Vesicle coat protein involved in Golgi to plasma membrane transport [PF11704.10, score=126.0]; Forkhead domain [PF00250.20, score=110.5]; Folliculin C-terminal domain [PF16692.7, score=107.0]} {Human: ENSG00000154803, FLCN, folliculin, [Score=209, Expect=1e-56]} {Mouse: ENSMUSG00000032633, Flcn, folliculin, [Score=208, Expect=1e-56]} {Dmel: FBgn0029504, CHES-1-like, Checkpoint suppressor 1-like, [RH, Score=139, Expect=1e-32]} {Celegans: WBGene00017699, flcn-1, F22D3.2 protein; FoLliCuliN, [RH, Score=97.1, Expect=3e-20]} {Smed: dd_Smed_v6_4329_0_2, dd_Smed_v6_4329_0_2, [Score=148, Expect=3e-37]} {RNA1509_11130, RNA1509_33195} {RNA1310_5404, RNA1509_33195} {RNA1509_33195, RNA815_1916}
5. MligTC455_33707 211 4.4 Mlig455_018361

Neo: -

Age: -

 XRRA1 1.709 - - - 0.958 - 0.751 Mlig455_018361 {REF} {Length: 3845} {Pfam: Leucine Rich repeats (2 copies) [PF12799.9, score=41.5]; Leucine rich repeat [PF13855.8, score=28.9]} {Human: ENSG00000166435, XRRA1, X-ray radiation resistance associated 1, [RH, Score=167, Expect=1e-45]} {Mouse: ENSMUSG00000035211, Xrra1, X-ray radiation resistance associated 1, [RH, Score=171, Expect=1e-43]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=63.9, Expect=7e-10]} {Smed: dd_Smed_v6_13519_0_1, dd_Smed_v6_13519_0_1, [RH, Score=154, Expect=3e-38]} {RNA1509_45583} {RNA1310_16743.1} {RNA815_17679}
6. MligTC455_46892 510 10.61 Mlig455_024306, Mlig455_024361

Neo: -

Age: -

 RAB8B 0.955 - - - 0.955 - -

Mlig455_024306 {REF} {Length: 1532} {Pfam: Ras family [PF00071.24, score=212.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=118.0]; ADP-ribosylation factor family [PF00025.23, score=77.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.4]; 50S ribosome-binding GTPase [PF01926.25, score=23.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=23.5]; RsgA GTPase [PF03193.18, score=22.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=257, Expect=4e-87]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=254, Expect=1e-85]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=256, Expect=6e-87]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=254, Expect=4e-86]} {Dmel: FBgn0262518, Rab8, [Score=245, Expect=1e-82]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=248, Expect=8e-84]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=251, Expect=2e-85]} {RNA1509_53476} {RNA1310_24855} {RNA815_9980.1}

Mlig455_024361 {REF} {Length: 1538} {Pfam: Ras family [PF00071.24, score=212.9]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=118.0]; ADP-ribosylation factor family [PF00025.23, score=77.6]; Elongation factor Tu GTP binding domain [PF00009.29, score=27.4]; 50S ribosome-binding GTPase [PF01926.25, score=23.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=23.5]; RsgA GTPase [PF03193.18, score=22.3]; Signal recognition particle receptor beta subunit [PF09439.12, score=18.9]} {Human: ENSG00000166128, RAB8B, RAB8B, member RAS oncogene family, [Score=257, Expect=4e-87]; ENSG00000167461, RAB8A, RAB8A, member RAS oncogene family, [Score=254, Expect=1e-85]} {Mouse: ENSMUSG00000036943, Rab8b, RAB8B, member RAS oncogene family, [Score=256, Expect=6e-87]; ENSMUSG00000003037, Rab8a, RAB8A, member RAS oncogene family, [Score=254, Expect=4e-86]} {Dmel: FBgn0262518, Rab8, [Score=245, Expect=1e-82]} {Celegans: WBGene00004272, rab-8, RAB family; Rab8, [Score=248, Expect=8e-84]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=251, Expect=2e-85]} {RNA1509_53476} {RNA1310_24855, RNA1509_53476} {RNA1509_53476, RNA815_9980.1}
7. MligTC455_47690 277 5.77 Mlig455_001541

Neo: -

Age: -

 UBTD2 0.954 - - - - - 0.954 Mlig455_001541 {REF} {Length: 3532} {Pfam: Ubiquitin-binding domain [PF16455.7, score=120.2]; Ubiquitin family [PF00240.25, score=33.4]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=216, Expect=7e-70]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=217, Expect=2e-70]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=3e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=199, Expect=3e-63]} {RNA1509_42408} {RNA1310_33971, RNA1509_42408} {RNA1509_42408, RNA815_29256}
8. MligTC455_17018 93 1.93 Mlig455_008015

Neo: -

Age: logFC(26M/2M)=1.300

 0.95 - - - 0.950 - - Mlig455_008015 {REF} {Length: 1919} {TRANSSPLICED} {Pfam: Sleepless protein [PF17064.7, score=37.0]} {Dmel: FBgn0260499, qvr, quiver, [Score=69.7, Expect=2e-15]} {Smed: dd_Smed_v6_16907_0_2, dd_Smed_v6_16907_0_2, [Score=74.7, Expect=1e-17]} {RNA1310_61248} {RNA815_27518}

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