TomoSeq data search

Data search

Results for MligTC455_05361

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_05361

38

0.78

Mlig455_067859

Neo: -

Age: -

LHFPL6

Mlig455_067859 {REF} {Length: 2249} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=111.7]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=19.2]; Lipid II flippase MurJ [PF03023.16, score=19.0]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [RH, Score=80.9, Expect=5e-17]} {Mouse: ENSMUSG00000048332, Lhfp, lipoma HMGIC fusion partner, [RH, Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_9373_0_1, dd_Smed_v6_9373_0_1, [RH, Score=179, Expect=1e-52]} {RNA1310_36894} {RNA815_56428}

Cumulative graph for MligTC455_05361

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.818	1.101	0.99978	1.00000
RegionR2	1.903	1.101	0.19636	0.55460
RegionR3	1.956	1.101	0.09635	0.54542
RegionR4	-0.414	1.101	0.86169	1.00000
RegionR5	-0.261	1.101	0.83750	1.00000
RegionR6	1.009	1.101	0.43353	0.99563
RegionR7	-2.912	1.101	0.99982	1.00000
RegionR8	2.537	1.101	0.13695	0.67661

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.401	1.101	0.99998	1.00000
RegenerationR2	0.934	1.101	0.28530	0.72837
RegenerationR3	0.077	1.101	0.92747	1.00000
RegenerationR4	0.182	1.101	0.90898	1.00000
RegenerationR5	1.189	1.101	0.32436	0.74693
RegenerationR6	0.667	1.101	0.60659	0.87213
RegenerationBL	-2.428	1.101	0.99980	1.00000
RegenerationTP	2.532	1.101	0.17737	0.61180

Genes with expression patterns similar to MligTC455_05361

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_05361	38	0.78	Mlig455_067859	Neo: - Age: -	LHFPL6	3	-	-	-	1.000	1.000	1.000	Mlig455_067859 {REF} {Length: 2249} {Pfam: Lipoma HMGIC fusion partner-like protein [PF10242.11, score=111.7]; PMP-22/EMP/MP20/Claudin tight junction [PF13903.8, score=19.2]; Lipid II flippase MurJ [PF03023.16, score=19.0]} {Human: ENSG00000183722, LHFPL6, LHFPL tetraspan subfamily member 6, [RH, Score=80.9, Expect=5e-17]} {Mouse: ENSMUSG00000048332, Lhfp, lipoma HMGIC fusion partner, [RH, Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_9373_0_1, dd_Smed_v6_9373_0_1, [RH, Score=179, Expect=1e-52]} {RNA1310_36894} {RNA815_56428}
2.	MligTC455_20630	49	1.03	Mlig455_015973	Neo: - Age: -	CHRND	1.82	-	-	-	0.824	0.996	-	Mlig455_015973 {REF} {Length: 1842} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=127.5]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=22.4]} {Human: ENSG00000135902, CHRND, cholinergic receptor nicotinic delta subunit, [Score=118, Expect=6e-29]; ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=115, Expect=5e-28]; ENSG00000274542, AC243734.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=114, Expect=2e-27]; ENSG00000175344, CHRNA7, cholinergic receptor nicotinic alpha 7 subunit, [Score=114, Expect=2e-27]; ENSG00000282088, AC254952.1, cholinergic receptor nicotinic alpha 7 subunit, [Score=113, Expect=5e-27]} {Mouse: ENSMUSG00000026251, Chrnd, cholinergic receptor, nicotinic, delta polypeptide, [Score=117, Expect=2e-28]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=112, Expect=4e-27]; ENSMUSG00000030525, Chrna7, cholinergic receptor, nicotinic, alpha polypeptide 7, [Score=112, Expect=4e-27]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=114, Expect=1e-27]} {Celegans: WBGene00000055, acr-16, Acetylcholine receptor subunit alpha-type acr-16, [Score=123, Expect=5e-31]} {Smed: dd_Smed_v6_29533_0_1, dd_Smed_v6_29533_0_1, [Score=177, Expect=3e-51]} {RNA1310_42200} {RNA815_41928}
3.	MligTC455_41289	88	1.84	Mlig455_006035	Neo: - Age: Up-Down-Down		1.692	-	-	-	0.711	0.981	-	Mlig455_006035 {REF} {Length: 1612} {RNA1509_22012} {RNA1310_42259} {RNA815_41617}
4.	MligTC455_13063	16	0.33	Mlig455_014773	Neo: - Age: -	LRRC73	0.963	-	-	-	-	0.963	-	Mlig455_014773 {REF} {Length: 1587} {TRANSSPLICED} {Pfam: Leucine Rich repeat [PF13516.8, score=38.3]} {Human: ENSG00000204052, LRRC73, leucine rich repeat containing 73, [RH, Score=120, Expect=4e-31]} {Mouse: ENSMUSG00000071073, Lrrc73, leucine rich repeat containing 73, [RH, Score=120, Expect=3e-31]} {RNA1509_57279} {RNA1310_21658, RNA1509_57279} {RNA1509_57279, RNA815_5530.1}
5.	MligTC455_32591	24	0.49	Mlig455_055614	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_055614 {REF} {Length: 5666} {RNA1509_50311} {RNA1310_1521.1} {RNA815_920.1}
6.	MligTC455_40142	75	1.57	Mlig455_022108	Neo: - Age: -	RAB37	0.959	-	-	-	-	0.959	-	Mlig455_022108 {REF} {Length: 1460} {Pfam: Ras family [PF00071.24, score=174.5]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=101.6]; ADP-ribosylation factor family [PF00025.23, score=48.9]; 50S ribosome-binding GTPase [PF01926.25, score=23.6]} {Human: ENSG00000172794, RAB37, RAB37, member RAS oncogene family, [RH, Score=204, Expect=8e-66]; ENSG00000167964, RAB26, RAB26, member RAS oncogene family, [RH, Score=197, Expect=7e-62]} {Mouse: ENSMUSG00000020732, Rab37, RAB37, member RAS oncogene family, [RH, Score=202, Expect=2e-64]; ENSMUSG00000079657, Rab26, RAB26, member RAS oncogene family, [RH, Score=197, Expect=4e-62]} {Dmel: FBgn0086913, Rab26, [Score=187, Expect=7e-57]} {Celegans: WBGene00004285, rab-37, RAB family, [Score=166, Expect=1e-50]} {Smed: dd_Smed_v6_3485_0_1, dd_Smed_v6_3485_0_1, [Score=169, Expect=4e-52]} {RNA1310_81029} {RNA815_42257}
7.	MligTC455_13157	25	0.51	Mlig455_040736	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_040736 {REF} {Length: 2276} {Pfam: Cysteine rich repeat [PF02363.21, score=20.5]} {Mouse: ENSMUSG00000024246, Thumpd2, THUMP domain containing 2, [Score=90.5, Expect=3e-19]} {Celegans: WBGene00008559, F07H5.8, [Score=65.5, Expect=3e-11]} {RNA1310_28745} {RNA815_44906}

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