Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_05763 | 2 | 0.05 | Mlig455_024172 | Neo: - Age: - |
FCN2 | Mlig455_024172 {REF} {Length: 989} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=124.4]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=106, Expect=2e-26]; ENSG00000085265, FCN1, ficolin 1, [Score=101, Expect=4e-24]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=102, Expect=7e-25]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=101, Expect=2e-24]} {Dmel: FBgn0033312, CG8642, [Score=87.0, Expect=7e-19]} {RNA1310_128650} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | - | - | - | - | |
RegionR2 | - | - | - | - | |
RegionR3 | - | - | - | - | |
RegionR4 | - | - | - | - | |
RegionR5 | - | - | - | - | |
RegionR6 | - | - | - | - | |
RegionR7 | - | - | - | - | |
RegionR8 | - | - | - | - |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | - | - | - | - | |
RegenerationR2 | - | - | - | - | |
RegenerationR3 | - | - | - | - | |
RegenerationR4 | - | - | - | - | |
RegenerationR5 | - | - | - | - | |
RegenerationR6 | - | - | - | - | |
RegenerationBL | - | - | - | - | |
RegenerationTP | - | - | - | - |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_00191 | 2 | 0.03 | Mlig455_054523 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_054523 {REF} {Length: 509} {RNA1509_42921} {RNA1310_60227} {RNA815_41809} | |
2. | MligTC455_00700 | 7 | 0.14 | Mlig455_014108 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_014108 {REF} {Length: 642} | |
3. | MligTC455_00740 | 10 | 0.22 | Mlig455_002439 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_002439 {REF} {Length: 746} {RNA1509_58374} {RNA1310_159} {RNA815_2634} | |
4. | MligTC455_00802 | 9 | 0.19 | Mlig455_069300 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_069300 {REF} {Length: 779} {NoTransDecoderORF} {RNA1509_38781} {RNA1310_24138} {RNA815_31175} | |
5. | MligTC455_00811 | 1 | 0.02 | Mlig455_035161 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_035161 {REF} {Length: 754} {NoTransDecoderORF} {RNA1310_100762} {RNA815_15429} | |
6. | MligTC455_00990 | 9 | 0.18 | Mlig455_034869 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_034869 {REF} {Length: 444} {RNA1509_36800} {RNA1310_29346} {RNA815_13970} | |
7. | MligTC455_02263 | 3 | 0.07 | Mlig455_051276 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_051276 {REF} {Length: 636} {NoTransDecoderORF} {RNA1310_78248} {RNA815_37635} | |
8. | MligTC455_04058 | 6 | 0.12 | Mlig455_015817, Mlig455_015825, Mlig455_023658 | Neo: - Age: - |
VAPA | 1 | - | 1.000 | - | - | - | - | Mlig455_015817 {REF} {Length: 3294} {TRANSSPLICED} {Pfam: MSP (Major sperm protein) domain [PF00635.28, score=104.4]} {Human: ENSG00000101558, VAPA, VAMP associated protein A, [RH, Score=177, Expect=2e-53]} {Mouse: ENSMUSG00000054455, Vapb, vesicle-associated membrane protein, associated protein B and C, [RH, Score=159, Expect=2e-47]} {Dmel: FBgn0029687, Vap33, VAMP-associated protein 33kDa, [RH, Score=129, Expect=1e-35]} {Celegans: WBGene00018008, vpr-1, Major sperm protein, [RH, Score=127, Expect=2e-35]} {Smed: dd_Smed_v6_4406_0_1, dd_Smed_v6_4406_0_1, [RH, Score=162, Expect=1e-48]} {RNA1509_6553} {RNA1310_18676.1, RNA1509_6553} {RNA1509_6553, RNA815_7215.1} Mlig455_015825 {REF} {Length: 511} {TRANSSPLICED} {Pfam: MSP (Major sperm protein) domain [PF00635.28, score=83.4]; Abnormal spindle-like microcephaly-assoc'd, ASPM-SPD-2-Hydin [PF15780.7, score=18.9]} {Human: ENSG00000101558, VAPA, VAMP associated protein A, [Score=103, Expect=9e-28]; ENSG00000124164, VAPB, VAMP associated protein B and C, [Score=99.0, Expect=1e-26]} {Mouse: ENSMUSG00000024091, Vapa, vesicle-associated membrane protein, associated protein A, [Score=99.8, Expect=5e-27]; ENSMUSG00000054455, Vapb, vesicle-associated membrane protein, associated protein B and C, [Score=97.8, Expect=2e-26]} {Dmel: FBgn0029687, Vap33, VAMP-associated protein 33kDa, [Score=77.4, Expect=1e-18]} {Celegans: WBGene00018008, vpr-1, Major sperm protein, [Score=92.8, Expect=1e-24]} {Smed: dd_Smed_v6_4406_0_1, dd_Smed_v6_4406_0_1, [Score=98.6, Expect=6e-27]} {RNA1509_6553} {RNA1310_18676.2} {RNA815_7215.1} Mlig455_023658 {REF} {Length: 540} {TRANSSPLICED} {Pfam: MSP (Major sperm protein) domain [PF00635.28, score=105.4]; Diaphanous GTPase-binding Domain [PF06371.15, score=24.3]} {Human: ENSG00000101558, VAPA, VAMP associated protein A, [Score=143, Expect=2e-42]; ENSG00000124164, VAPB, VAMP associated protein B and C, [Score=142, Expect=4e-42]} {Mouse: ENSMUSG00000024091, Vapa, vesicle-associated membrane protein, associated protein A, [Score=140, Expect=1e-41]; ENSMUSG00000054455, Vapb, vesicle-associated membrane protein, associated protein B and C, [Score=139, Expect=2e-41]} {Dmel: FBgn0029687, Vap33, VAMP-associated protein 33kDa, [RH, Score=118, Expect=3e-33]} {Celegans: WBGene00018008, vpr-1, Major sperm protein, [RH, Score=119, Expect=2e-33]} {Smed: dd_Smed_v6_1433_0_1, dd_Smed_v6_1433_0_1, [RH, Score=139, Expect=5e-42]} {RNA1509_6553} {RNA1310_18676.2} {RNA815_7215.1} |
9. | MligTC455_05763 | 2 | 0.05 | Mlig455_024172 | Neo: - Age: - |
FCN2 | 1 | - | 1.000 | - | - | - | - | Mlig455_024172 {REF} {Length: 989} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=124.4]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=106, Expect=2e-26]; ENSG00000085265, FCN1, ficolin 1, [Score=101, Expect=4e-24]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=102, Expect=7e-25]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=101, Expect=2e-24]} {Dmel: FBgn0033312, CG8642, [Score=87.0, Expect=7e-19]} {RNA1310_128650} |
10. | MligTC455_10719 | 61 | 1.26 | Mlig455_041088 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_041088 {REF} {Length: 338} {NoTransDecoderORF} {RNA1310_18998} | |
11. | MligTC455_24300 | 21 | 0.43 | Mlig455_029224, Mlig455_035634 | Neo: - Age: - |
KCNQ5 | 1 | - | 1.000 | - | - | - | - | Mlig455_029224 {REF} {Length: 2595} {Pfam: KCNQ voltage-gated potassium channel [PF03520.16, score=121.6]; Ion transport protein [PF00520.33, score=99.6]; Ion channel [PF07885.18, score=51.3]; Putative sensor [PF13796.8, score=19.2]} {Human: ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [RH, Score=478, Expect=3e-156]; ENSG00000117013, KCNQ4, potassium voltage-gated channel subfamily Q member 4, [RH, Score=456, Expect=3e-151]} {Mouse: ENSMUSG00000028033, Kcnq5, potassium voltage-gated channel, subfamily Q, member 5, [RH, Score=477, Expect=1e-155]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [RH, Score=605, Expect=0.0]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [RH, Score=521, Expect=3e-176]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [RH, Score=643, Expect=0.0]} {RNA1509_34272} {RNA1310_3730.2} {RNA815_10003} Mlig455_035634 {REF} {Length: 2084} {Pfam: Ion transport protein [PF00520.33, score=62.5]; Putative sensor [PF13796.8, score=20.8]} {Human: ENSG00000185760, KCNQ5, potassium voltage-gated channel subfamily Q member 5, [Score=246, Expect=9e-73]; ENSG00000053918, KCNQ1, potassium voltage-gated channel subfamily Q member 1, [Score=238, Expect=3e-71]} {Mouse: ENSMUSG00000028033, Kcnq5, potassium voltage-gated channel, subfamily Q, member 5, [Score=244, Expect=4e-73]; ENSMUSG00000009545, Kcnq1, potassium voltage-gated channel, subfamily Q, member 1, [Score=243, Expect=2e-73]; ENSMUSG00000028631, Kcnq4, potassium voltage-gated channel, subfamily Q, member 4, [Score=233, Expect=2e-69]} {Dmel: FBgn0033494, KCNQ, KCNQ potassium channel, [Score=288, Expect=1e-90]} {Celegans: WBGene00002233, kqt-1, KQT-1 potassium channel; Potassium channel, KvQLT family, [Score=270, Expect=1e-83]} {Smed: dd_Smed_v6_12681_0_1, dd_Smed_v6_12681_0_1, [Score=361, Expect=1e-117]} {RNA1509_22837, RNA1509_23383} {RNA1310_13725.2, RNA1509_22837} {RNA1509_22837, RNA815_10003} |
12. | MligTC455_26508 | 9 | 0.19 | Mlig455_004141, Mlig455_006847, Mlig455_042467, Mlig455_045362, Mlig455_055144, Mlig455_056120 | Neo: Germline Age: logFC(26M/2M)=-0.588 |
CELSR2, RTL1 | 1 | - | 1.000 | - | - | - | - | Mlig455_004141 {REF} {Length: 4731} {Pfam: Cadherin domain [PF00028.19, score=27.7]} {Human: ENSG00000143126, CELSR2, cadherin EGF LAG seven-pass G-type receptor 2, [Score=63.9, Expect=6e-11]; ENSG00000165323, FAT3, FAT atypical cadherin 3, [Score=61.2, Expect=5e-10]; ENSG00000282908, FAT3, FAT atypical cadherin 3, [Score=61.2, Expect=5e-10]} {Mouse: ENSMUSG00000068740, Celsr2, cadherin, EGF LAG seven-pass G-type receptor 2, [Score=63.9, Expect=3e-11]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=61.6, Expect=2e-10]} {Dmel: FBgn0024836, stan, starry night, [Score=59.7, Expect=6e-10]} {Smed: dd_Smed_v6_15643_0_1, dd_Smed_v6_15643_0_1, [Score=53.9, Expect=3e-08]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127} Mlig455_006847 {REF} {Length: 4706} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.3]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=93.2, Expect=2e-18]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=232, Expect=6e-66]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127} Mlig455_042467 {REF} {Length: 3160} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=60.6]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=80.1, Expect=1e-14]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=179, Expect=4e-48]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127} Mlig455_045362 {REF} {Length: 4361} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=58.5]; gag-polyprotein putative aspartyl protease [PF13975.8, score=19.9]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=157, Expect=5e-40]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127} Mlig455_055144 {REF} {Length: 4897} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=114.8]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=56.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=92.0, Expect=3e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=227, Expect=3e-64]} {RNA1509_50918} {RNA1310_2131.1} {RNA815_11127} Mlig455_056120 {REF} {Length: 321} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.6]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=68.6, Expect=8e-15]} {RNA1509_50918} {RNA1310_2131.1} |
13. | MligTC455_42181 | 44 | 0.92 | Mlig455_031104, Mlig455_031106 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_031104 {REF} {Length: 904} {NoTransDecoderORF} {RNA1310_108034} {RNA815_53785} Mlig455_031106 {REF} {Length: 851} {NoTransDecoderORF} {RNA1310_108034} {RNA815_53785} |
|
14. | MligTC455_55424 | 8 | 0.16 | Mlig455_043366 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_043366 {REF} {Length: 477} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_88708} | |
15. | MligTC455_57412 | 4 | 0.08 | Mlig455_006412 | Neo: - Age: - |
1 | - | 1.000 | - | - | - | - | Mlig455_006412 {REF} {Length: 310} {NoTransDecoderORF} {RNA1310_91128} | |
16. | MligTC455_01576 | 14 | 0.28 | Mlig455_032984 | Neo: - Age: - Region-enriched R4: 4.718/0.00090 |
0.98 | - | 0.980 | - | - | - | - | Mlig455_032984 {REF} {Length: 345} {NoTransDecoderORF} {RNA1509_33647} {RNA1310_21286.2} {RNA815_17722} | |
17. | MligTC455_13350 | 45 | 0.93 | Mlig455_050065 | Neo: - Age: - Region-enriched R2: 6.087/0.03122 |
0.975 | - | 0.975 | - | - | - | - | Mlig455_050065 {REF} {Length: 558} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_35955} {RNA815_1171.1} | |
18. | MligTC455_25318 | 85 | 1.77 | Mlig455_022125 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 3.046/0.02891 |
0.966 | - | 0.966 | - | - | - | - | Mlig455_022125 {REF} {Length: 2145} {RNA1509_17391} {RNA1310_28598} {RNA815_31621} | |
19. | MligTC455_00614 | 4 | 0.08 | Mlig455_064275 | Neo: - Age: - |
0.965 | - | 0.965 | - | - | - | - | Mlig455_064275 {REF} {Length: 1328} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=35.7]} {Smed: dd_Smed_v6_43503_0_1, dd_Smed_v6_43503_0_1, [Score=58.9, Expect=9e-10]} | |
20. | MligTC455_30913 | 19 | 0.39 | Mlig455_034474, Mlig455_042925, Mlig455_042926 | Neo: - Age: - |
0.965 | - | 0.965 | - | - | - | - | Mlig455_034474 {REF} {Length: 671} {NoTransDecoderORF} {RNA1509_55508} {RNA1310_19597} {RNA815_31859} Mlig455_042925 {REF} {Length: 2534} {RNA1509_55508} {RNA1310_19597} {RNA815_31859} Mlig455_042926 {REF} {Length: 16695} {RNA1509_55508} {RNA1310_19597} {RNA815_31859} |
|
21. | MligTC455_34040 | 14 | 0.3 | Mlig455_004364 | Neo: Germline |
0.963 | - | 0.963 | - | - | - | - | Mlig455_004364 {REF} {Length: 2363} {RNA1509_1097, RNA1509_21186} {RNA1310_10114.1, RNA1509_21186} {RNA1509_21186, RNA815_3296} | |
22. | MligTC455_09245 | 14 | 0.29 | Mlig455_067982 | Neo: - Age: - |
0.959 | - | 0.959 | - | - | - | - | Mlig455_067982 {REF} {Length: 761} {NoTransDecoderORF} {RNA1310_57536} | |
23. | MligTC455_10589 | 5 | 0.1 | Mlig455_013174 | Neo: - Age: - |
0.95 | - | 0.950 | - | - | - | - | Mlig455_013174 {REF} {Length: 3227} {Pfam: WSC domain [PF01822.21, score=32.7]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=43.9, Expect=1e-05]} {RNA1509_26591} {RNA1310_23750} {RNA815_4464.1} | |
24. | MligTC455_10590 | 4 | 0.08 | Mlig455_045994 | Neo: - Age: - |
0.95 | - | 0.950 | - | - | - | - | Mlig455_045994 {REF} {Length: 1781} {Pfam: WSC domain [PF01822.21, score=33.5]} {Smed: dd_Smed_v6_52492_0_1, dd_Smed_v6_52492_0_1, [Score=44.3, Expect=7e-06]} {RNA1509_26591} {RNA1310_23750} {RNA815_4464.1} |