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Results for MligTC455_25318

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_25318 85 1.77 Mlig455_022125

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.046/0.02891

 Mlig455_022125 {REF} {Length: 2145} {RNA1509_17391} {RNA1310_28598} {RNA815_31621}

Cumulative graph for MligTC455_25318

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.905 1.732 0.18587 0.81681
RegionR2 0.413 1.732 0.66314 0.99396
RegionR3 0.099 1.732 0.75478 1.00000
RegionR4 3.046 1.732 0.00374 0.02891
RegionR5 -1.325 1.732 0.99351 1.00000
RegionR6 -0.301 1.732 0.89330 1.00000
RegionR7 -1.877 1.732 0.99939 1.00000
RegionR8 -2.96 1.732 0.46590 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.79 1.732 0.30079 0.99790
RegenerationR2 1.635 1.732 0.10471 0.50980
RegenerationR3 0.504 1.732 0.67717 0.93962
RegenerationR4 -2.005 1.732 0.03665 0.30905
RegenerationR5 0.423 1.732 0.71340 0.95697
RegenerationR6 1.296 1.732 0.30877 0.65719
RegenerationBL 3.215 1.732 0.07946 0.32930
RegenerationTP 4.711 1.732 0.02830 0.28309


Genes with expression patterns similar to MligTC455_25318

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_25318 85 1.77 Mlig455_022125

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.046/0.02891

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_022125 {REF} {Length: 2145} {RNA1509_17391} {RNA1310_28598} {RNA815_31621}
2. MligTC455_26366 75 1.56 Mlig455_013893

Neo: -

Age: -

 NSUN7 2.663 - - 0.989 0.802 - 0.872 Mlig455_013893 {REF} {Length: 1904} {Human: ENSG00000179299, NSUN7, NOP2/Sun RNA methyltransferase family member 7, [Score=167, Expect=4e-45]} {Mouse: ENSMUSG00000029206, Nsun7, NOL1/NOP2/Sun domain family, member 7, [Score=164, Expect=3e-44]} {Dmel: FBgn0266099, CG44836, [Score=72.8, Expect=2e-13]} {Celegans: WBGene00013151, nsun-5, Nop2 (NOP2)/SUN domain family member, [Score=56.2, Expect=2e-08]} {Smed: dd_Smed_v6_30093_0_1, dd_Smed_v6_30093_0_1, [Score=203, Expect=3e-60]} {RNA1310_17601} {RNA815_32144}
3. MligTC455_17376 103 2.15 Mlig455_020346

Neo: -

Age: -

 2.527 0.725 - 0.954 - - 0.848 Mlig455_020346 {REF} {Length: 1093} {NoTransDecoderORF} {RNA1310_106511}
4. MligTC455_41325 202 4.2 Mlig455_025012

Neo: -

Age: Up-Down-Up

 CCDC151 2.48 0.953 - 0.825 0.702 - - Mlig455_025012 {REF} {Length: 2382} {TRANSSPLICED} {Human: ENSG00000198003, CCDC151, coiled-coil domain containing 151, [Score=251, Expect=5e-75]} {Mouse: ENSMUSG00000039632, Ccdc151, coiled-coil domain containing 151, [Score=261, Expect=4e-79]} {Dmel: FBgn0036219, CCDC151, Coiled-coil domain containing protein 151, [Score=111, Expect=2e-25]} {Smed: dd_Smed_v6_4526_0_1, dd_Smed_v6_4526_0_1, [Score=463, Expect=3e-158]} {RNA1509_18758} {RNA1310_9513.1} {RNA815_24234}
5. MligTC455_44727 99 2.06 Mlig455_033185

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.470

 CLCN3 1.947 0.954 - 0.993 - - - Mlig455_033185 {REF} {Length: 4282} {TRANSSPLICED} {Pfam: Voltage gated chloride channel [PF00654.22, score=304.3]; CBS domain [PF00571.30, score=55.0]} {Human: ENSG00000109572, CLCN3, chloride voltage-gated channel 3, [Score=796, Expect=0.0]; ENSG00000073464, CLCN4, chloride voltage-gated channel 4, [Score=766, Expect=0.0]} {Mouse: ENSMUSG00000004319, Clcn3, chloride channel, voltage-sensitive 3, [Score=797, Expect=0.0]; ENSMUSG00000000605, Clcn4, chloride channel, voltage-sensitive 4, [Score=764, Expect=0.0]} {Dmel: FBgn0036566, ClC-c, Chloride channel-c, [Score=783, Expect=0.0]} {Celegans: WBGene00000532, clh-5, Chloride channel protein, [Score=676, Expect=0.0]} {Smed: dd_Smed_v6_4076_1_1, dd_Smed_v6_4076_1_1, [Score=729, Expect=0.0]} {RNA1509_27287} {RNA1310_201.1, RNA1509_27287} {RNA1509_27287, RNA815_6427.1}
6. MligTC455_09049 153 3.2 Mlig455_032485

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.458

 MAP3K19 1.945 0.957 - 0.988 - - - Mlig455_032485 {REF} {Length: 2611} {Pfam: Protein kinase domain [PF00069.27, score=191.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=137.7]; ABC1 atypical kinase-like domain [PF03109.18, score=42.9]; Ankyrin repeats (many copies) [PF13637.8, score=41.8]; Ankyrin repeats (3 copies) [PF12796.9, score=41.0]; Fungal protein kinase [PF17667.3, score=37.1]; Phosphotransferase enzyme family [PF01636.25, score=32.7]; Kinase-like [PF14531.8, score=28.2]; Ankyrin repeats (many copies) [PF13857.8, score=20.5]; Ankyrin repeat [PF00023.32, score=19.8]; Ankyrin repeat [PF13606.8, score=19.2]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=158, Expect=6e-42]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=155, Expect=9e-41]} {Dmel: FBgn0035001, Slik, Sterile20-like kinase, [Score=131, Expect=7e-32]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=120, Expect=1e-28]} {Smed: dd_Smed_v6_9041_0_1, dd_Smed_v6_9041_0_1, [Score=123, Expect=3e-31]} {RNA1509_50575} {RNA1310_16011, RNA1509_50575} {RNA1509_50575, RNA815_5798}
7. MligTC455_50130 149 3.11 Mlig455_000637

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.523

 1.942 0.959 - 0.983 - - - Mlig455_000637 {REF} {Length: 3012} {RNA1509_32590} {RNA1310_8641.2, RNA1509_32590} {RNA1509_32590, RNA815_3178.1}
8. MligTC455_10719 61 1.26 Mlig455_041088

Neo: -

Age: -

 1.938 - 0.966 - - - 0.972 Mlig455_041088 {REF} {Length: 338} {NoTransDecoderORF} {RNA1310_18998}
9. MligTC455_29032 108 2.25 Mlig455_047422

Neo: -

Age: -

 1.935 0.951 - 0.984 - - - Mlig455_047422 {REF} {Length: 690} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_78699.1}
10. MligTC455_32959 420 8.75 Mlig455_017533, Mlig455_026822

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 2.461/0.00739

 ELF4 1.934 0.950 - 0.984 - - -

Mlig455_017533 {REF} {Length: 4604} {Pfam: Ets-domain [PF00178.24, score=49.1]} {Human: ENSG00000102034, ELF4, E74 like ETS transcription factor 4, [Score=59.3, Expect=3e-08]; ENSG00000109381, ELF2, E74 like ETS transcription factor 2, [Score=57.4, Expect=1e-07]} {Mouse: ENSMUSG00000037174, Elf2, E74-like factor 2, [Score=61.6, Expect=5e-09]} {Smed: dd_Smed_v6_7247_0_1, dd_Smed_v6_7247_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_17091, RNA1509_29830} {RNA1310_1652, RNA1509_29830} {RNA1509_29830, RNA815_1367}

Mlig455_026822 {REF} {Length: 4556} {Pfam: Ets-domain [PF00178.24, score=49.2]} {Human: ENSG00000102034, ELF4, E74 like ETS transcription factor 4, [Score=59.3, Expect=3e-08]; ENSG00000109381, ELF2, E74 like ETS transcription factor 2, [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000037174, Elf2, E74-like factor 2, [Score=61.2, Expect=5e-09]} {Smed: dd_Smed_v6_7247_0_1, dd_Smed_v6_7247_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_17091, RNA1509_59324} {RNA1310_1652, RNA1509_17091, RNA1509_59324} {RNA1509_17091, RNA1509_59324, RNA815_1367}
11. MligTC455_48166 242 5.05 Mlig455_030447

Neo: -

Age: Down-Up-Down

 CCNK 1.91 0.945 - 0.965 - - - Mlig455_030447 {REF} {Length: 2396} {TRANSSPLICED} {Pfam: Cyclin, N-terminal domain [PF00134.25, score=58.9]; BAT2 N-terminus [PF07001.13, score=19.3]} {Human: ENSG00000090061, CCNK, cyclin K, [RH, Score=276, Expect=2e-85]} {Mouse: ENSMUSG00000021258, Ccnk, cyclin K, [RH, Score=277, Expect=4e-86]} {Dmel: FBgn0025674, CycK, Cyclin K, [RH, Score=291, Expect=1e-93]} {Celegans: WBGene00009650, ccnk-1, CyCliN K, [RH, Score=152, Expect=1e-42]} {Smed: dd_Smed_v6_2558_1_2, dd_Smed_v6_2558_1_2, [RH, Score=280, Expect=2e-90]} {RNA1509_49990} {RNA1310_8478.1} {RNA815_10830}
12. MligTC455_45212 287 5.97 Mlig455_023937

Neo: -

Age: -

 TFAP4 1.905 0.961 - 0.944 - - - Mlig455_023937 {REF} {Length: 2526} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=67.6]} {Human: ENSG00000090447, TFAP4, transcription factor AP-4, [RH, Score=90.5, Expect=1e-19]} {Mouse: ENSMUSG00000005718, Tfap4, transcription factor AP4, [RH, Score=90.9, Expect=6e-20]} {Dmel: FBgn0001994, crp, cropped, [RH, Score=92.8, Expect=3e-20]} {Celegans: WBGene00001955, hlh-11, Helix-loop-helix protein 11, [RH, Score=83.2, Expect=3e-17]} {Smed: dd_Smed_v6_8205_0_1, dd_Smed_v6_8205_0_1, [RH, Score=90.9, Expect=2e-20]} {RNA1509_12849, RNA1509_21993} {RNA1310_9423.1, RNA1509_21993} {RNA1509_21993, RNA815_7350.2}
13. MligTC455_33664 285 5.95 Mlig455_070034

Neo: -

Age: -

 ADRA1A 1.902 0.948 - 0.954 - - - Mlig455_070034 {REF} {Length: 2855} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=104.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=37.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=21.3]} {Human: ENSG00000120907, ADRA1A, adrenoceptor alpha 1A, [Score=85.1, Expect=5e-17]; ENSG00000102195, GPR50, G protein-coupled receptor 50, [Score=82.4, Expect=5e-16]} {Mouse: ENSMUSG00000056380, Gpr50, G-protein-coupled receptor 50, [Score=83.2, Expect=2e-16]} {Dmel: FBgn0025631, moody, [Score=89.0, Expect=2e-18]} {Celegans: WBGene00006475, tyra-3, TYRAmine receptor, [Score=61.6, Expect=5e-10]} {Smed: dd_Smed_v6_54079_0_1, dd_Smed_v6_54079_0_1, [Score=69.7, Expect=9e-13]} {RNA1509_25254} {RNA1310_23746} {RNA815_34946}
14. MligTC455_16813 75 1.56 Mlig455_049094

Neo: -

Age: -

 NMUR2 1.895 - - 0.969 - - 0.926 Mlig455_049094 {REF} {Length: 1759} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=148.5]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=34.9]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=25.8]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.2]} {Human: ENSG00000132911, NMUR2, neuromedin U receptor 2, [RH, Score=161, Expect=3e-44]} {Mouse: ENSMUSG00000037393, Nmur2, neuromedin U receptor 2, [RH, Score=176, Expect=6e-50]} {Dmel: FBgn0038140, PK2-R1, Pyrokinin 2 receptor 1, [RH, Score=213, Expect=6e-62]} {Celegans: WBGene00016747, nmur-1, NMUR (NeuroMedin U Receptor) homolog; Neuromedin U receptor, [RH, Score=177, Expect=2e-50]} {Smed: dd_Smed_v6_17801_0_1, dd_Smed_v6_17801_0_1, [Score=159, Expect=5e-44]} {RNA1310_33884} {RNA815_14436}
15. MligTC455_20494 96 2 Mlig455_066963

Neo: -

Age: -

 1.873 - - 0.981 - - 0.892 Mlig455_066963 {REF} {Length: 2065} {Pfam: EGF-like domain [PF00008.29, score=26.4]} {RNA1310_52700} {RNA815_31144}
16. MligTC455_32664 853 17.76 Mlig455_015116, Mlig455_044224, Mlig455_044242, Mlig455_054085, Mlig455_061909, Mlig455_068039

Neo: -

Age: Up-Down-Down

 HNRNPUL1 1.873 0.892 - 0.981 - - -

Mlig455_015116 {REF} {Length: 289} {NoTransDecoderORF} {RNA1509_8096} {RNA1310_49974} {RNA815_50679}

Mlig455_044224 {REF} {Length: 1874} {Pfam: SAP domain [PF02037.29, score=41.5]} {RNA1509_8096} {RNA1310_3502} {RNA815_801}

Mlig455_044242 {REF} {Length: 4218} {Pfam: SAP domain [PF02037.29, score=42.6]} {Human: ENSG00000105323, HNRNPUL1, heterogeneous nuclear ribonucleoprotein U like 1, [Score=42.4, Expect=8e-06]} {RNA1509_8096} {RNA1310_1771} {RNA815_801}

Mlig455_054085 {REF} {Length: 269} {NoTransDecoderORF} {RNA1509_8096} {RNA1310_49974} {RNA815_50679}

Mlig455_061909 {REF} {Length: 1240} {RNA1509_8096} {RNA1310_49974} {RNA815_50679}

Mlig455_068039 {REF} {Length: 252} {NoTransDecoderORF} {RNA1509_8096} {RNA1310_98477} {RNA815_50679}
17. MligTC455_30382 553 11.52 Mlig455_061514, Mlig455_070655

Neo: -

Age: -

 TRAF6 1.869 0.888 - 0.981 - - -

Mlig455_061514 {REF} {Length: 2184} {Pfam: TRAF-type zinc finger [PF02176.20, score=44.1]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=91.7, Expect=1e-19]; ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=88.6, Expect=2e-18]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=92.4, Expect=5e-20]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=90.1, Expect=3e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=92.0, Expect=2e-20]} {RNA1509_16871} {RNA1310_25901} {RNA815_11260}

Mlig455_070655 {REF} {Length: 1907} {Pfam: TRAF-type zinc finger [PF02176.20, score=44.1]} {Human: ENSG00000175104, TRAF6, TNF receptor associated factor 6, [Score=93.2, Expect=4e-20]; ENSG00000131323, TRAF3, TNF receptor associated factor 3, [Score=89.4, Expect=8e-19]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=93.2, Expect=3e-20]; ENSMUSG00000026942, Traf2, TNF receptor-associated factor 2, [Score=89.4, Expect=4e-19]} {Smed: dd_Smed_v6_168_0_1, dd_Smed_v6_168_0_1, [Score=93.2, Expect=9e-21]} {RNA1509_16871} {RNA1310_25901} {RNA815_11260}
18. MligTC455_19234 144 3.01 Mlig455_013422

Neo: -

Age: -

 PCDH1 1.868 - - 0.989 - - 0.879 Mlig455_013422 {REF} {Length: 5999} {Pfam: Cadherin domain [PF00028.19, score=190.7]; Cadherin-like [PF16184.7, score=28.6]} {Human: ENSG00000156453, PCDH1, protocadherin 1, [Score=218, Expect=2e-57]; ENSG00000184226, PCDH9, protocadherin 9, [Score=211, Expect=6e-55]} {Mouse: ENSMUSG00000051375, Pcdh1, protocadherin 1, [Score=224, Expect=7e-60]} {Dmel: FBgn0024836, stan, starry night, [Score=172, Expect=8e-43]} {Celegans: WBGene00001475, fmi-1, FlaMIngo (Cadherin plus 7TM domain) homolog; Flamingo-like protein FMI-1, [Score=147, Expect=3e-35]} {Smed: dd_Smed_v6_21207_0_1, dd_Smed_v6_21207_0_1, [Score=290, Expect=8e-82]} {RNA1509_34166} {RNA1310_7773} {RNA815_31630}
19. MligTC455_45802 239 4.98 Mlig455_046270, Mlig455_061548

Neo: -

Age: -

 1.865 0.954 - 0.911 - - -

Mlig455_046270 {REF} {Length: 3363}

Mlig455_061548 {REF} {Length: 982}
20. MligTC455_21222 221 4.6 Mlig455_038486, Mlig455_046701, Mlig455_052136, Mlig455_055634

Neo: -

Age: -

Region-enriched R1: 7.823/0.00076
Region-enriched R4: 5.534/0.00000

 1.857 - 0.865 0.992 - - -

Mlig455_038486 {REF} {Length: 1089} {RNA1509_55040} {RNA1310_81175} {RNA815_45657}

Mlig455_046701 {REF} {Length: 758} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_81175} {RNA815_45657}

Mlig455_052136 {REF} {Length: 296} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_48584} {RNA815_45657}

Mlig455_055634 {REF} {Length: 254} {NoTransDecoderORF} {RNA1509_45210} {RNA1310_81175} {RNA815_45657}
21. MligTC455_43702 231 4.82 Mlig455_023865

Neo: Irradiation

Age: -

 SLIT1 1.855 0.879 - 0.976 - - - Mlig455_023865 {REF} {Length: 4963} {Pfam: Leucine rich repeat [PF13855.8, score=60.6]; Leucine Rich repeats (2 copies) [PF12799.9, score=29.2]; Leucine Rich Repeat [PF00560.35, score=25.9]} {Human: ENSG00000187122, SLIT1, slit guidance ligand 1, [Score=84.7, Expect=6e-17]} {Mouse: ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=80.5, Expect=3e-15]; ENSMUSG00000025020, Slit1, slit guidance ligand 1, [Score=78.6, Expect=1e-14]} {Dmel: FBgn0034083, lbk, lambik, [Score=58.2, Expect=2e-08]} {Smed: dd_Smed_v6_9128_0_1, dd_Smed_v6_9128_0_1, [RH, Score=134, Expect=1e-33]} {RNA1509_13979, RNA1509_41843, RNA1509_57264} {RNA1310_10154.1, RNA1509_41843, RNA1509_57264} {RNA1509_41843, RNA1509_57264, RNA815_4611}
22. MligTC455_15564 86 1.79 Mlig455_054618

Neo: -

Age: -

 1.846 0.863 - 0.983 - - - Mlig455_054618 {REF} {Length: 920} {NoTransDecoderORF} {RNA1310_55174} {RNA815_12298}
23. MligTC455_42808 907 18.9 Mlig455_057609, Mlig455_070798

Neo: -

Age: logFC(26M/2M)=0.408

 1.838 0.852 - 0.986 - - -

Mlig455_057609 {REF} {Length: 1636} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=49.8]} {RNA1509_14545} {RNA1310_42342.1} {RNA815_11757}

Mlig455_070798 {REF} {Length: 1237} {TRANSSPLICED} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=49.8]} {RNA1509_14545} {RNA1310_42342.1, RNA1509_14545} {RNA1509_14545, RNA815_11757}
24. MligTC455_20811 136 2.84 Mlig455_005487, Mlig455_011154, Mlig455_018680, Mlig455_019673, Mlig455_023197, Mlig455_023371, Mlig455_046095, Mlig455_047141, Mlig455_048093, Mlig455_048094, Mlig455_050866, Mlig455_060179, Mlig455_067093, Mlig455_068651, Mlig455_070401

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.616

 CNBP 1.832 - 0.841 0.991 - - -

Mlig455_005487 {REF} {Length: 1033} {Pfam: Integrase core domain [PF00665.28, score=43.8]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=45.8, Expect=8e-07]} {RNA1509_17212} {RNA1310_1773} {RNA815_1548}

Mlig455_011154 {REF} {Length: 2186} {RNA1509_17212} {RNA1310_24779.1} {RNA815_1548}

Mlig455_018680 {REF} {Length: 2072} {Pfam: Integrase core domain [PF00665.28, score=55.0]; Integrase core domain [PF13683.8, score=21.0]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=77.4, Expect=5e-16]} {RNA1509_57524} {RNA1310_29197} {RNA815_56792}

Mlig455_019673 {REF} {Length: 425} {Pfam: Zinc knuckle [PF00098.25, score=28.4]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [Score=46.6, Expect=1e-06]} {Mouse: ENSMUSG00000030057, Cnbp, cellular nucleic acid binding protein, [Score=46.6, Expect=8e-07]} {RNA1509_57524} {RNA1310_11057.1} {RNA815_18906}

Mlig455_023197 {REF} {Length: 1170} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197} {RNA815_56792}

Mlig455_023371 {REF} {Length: 4285} {Pfam: gag-polyprotein putative aspartyl protease [PF13975.8, score=34.8]; Aspartyl protease [PF13650.8, score=25.1]; Zinc knuckle [PF00098.25, score=22.4]} {Celegans: WBGene00019335, K02F6.1, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_10279_0_1, dd_Smed_v6_10279_0_1, [Score=45.4, Expect=1e-05]} {RNA1509_57524} {RNA1310_34097} {RNA815_18906}

Mlig455_046095 {REF} {Length: 1553} {Pfam: Integrase core domain [PF00665.28, score=61.7]; Integrase zinc binding domain [PF17921.3, score=56.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.9, Expect=9e-11]} {RNA1509_17212} {RNA1310_2944} {RNA815_1548}

Mlig455_047141 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_048093 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_048094 {REF} {Length: 900} {RNA1509_57795} {RNA1310_147475} {RNA815_56792}

Mlig455_050866 {REF} {Length: 10660} {Pfam: Zinc knuckle [PF00098.25, score=24.2]} {RNA1509_17212, RNA1509_57524} {RNA1310_1773, RNA1509_57524} {RNA1509_57524, RNA815_1548}

Mlig455_060179 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_067093 {REF} {Length: 584} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=112.2]} {Smed: dd_Smed_v6_26921_0_1, dd_Smed_v6_26921_0_1, [Score=89.7, Expect=1e-21]} {RNA1509_57524} {RNA1310_29197}

Mlig455_068651 {REF} {Length: 818} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=85.1]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=61.3]} {Smed: dd_Smed_v6_21427_0_1, dd_Smed_v6_21427_0_1, [Score=62.0, Expect=1e-12]} {RNA1509_57524} {RNA1310_29197}

Mlig455_070401 {REF} {Length: 2249} {Pfam: Integrase core domain [PF00665.28, score=61.7]; Integrase zinc binding domain [PF17921.3, score=56.5]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=63.9, Expect=9e-11]} {RNA1509_17212} {RNA1310_2944} {RNA815_1548}
25. MligTC455_10199 290 6.05 Mlig455_027808

Neo: -

Age: -

 1.829 - - - - 0.873 0.956 Mlig455_027808 {REF} {Length: 3251} {RNA1509_29378} {RNA1310_3505.1} {RNA815_17578}
26. MligTC455_26248 162 3.38 Mlig455_052600, Mlig455_052650

Neo: -

Age: -

 1.823 - - 0.991 - - 0.832

Mlig455_052600 {REF} {Length: 3376} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=155.1]} {Smed: dd_Smed_v6_9633_0_1, dd_Smed_v6_9633_0_1, [Score=67.0, Expect=1e-11]} {RNA1509_10005} {RNA1310_10838.1} {RNA815_11723}

Mlig455_052650 {REF} {Length: 3364} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=155.1]} {Smed: dd_Smed_v6_9633_0_1, dd_Smed_v6_9633_0_1, [Score=67.0, Expect=1e-11]} {RNA1509_10005} {RNA1310_10838.1} {RNA815_11723}
27. MligTC455_29705 84 1.74 Mlig455_068931

Neo: -

Age: -

 1.822 - - 0.970 - - 0.852 Mlig455_068931 {REF} {Length: 4351} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=210.9]; PIF1-like helicase [PF05970.16, score=107.2]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=62.8, Expect=1e-09]} {Celegans: WBGene00019136, F59H6.5, [Score=468, Expect=8e-144]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [RH, Score=125, Expect=9e-34]} {RNA1509_53692} {RNA1310_981} {RNA815_15863}
28. MligTC455_40874 65 1.34 Mlig455_051048

Neo: -

Age: -

 ASIC5 1.807 - - 0.990 - - 0.817 Mlig455_051048 {REF} {Length: 2313} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=194.4]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=54.3, Expect=4e-07]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=64.7, Expect=1e-10]} {Smed: dd_Smed_v6_19599_0_1, dd_Smed_v6_19599_0_1, [RH, Score=491, Expect=1e-167]} {RNA1509_56048} {RNA1310_34335} {RNA815_62672}
29. MligTC455_06944 52 1.08 Mlig455_063986

Neo: -

Age: -

 1.806 - - 0.981 - - 0.825 Mlig455_063986 {REF} {Length: 1807} {RNA1310_68549} {RNA815_47840}
30. MligTC455_50425 1754 36.55 Mlig455_021985, Mlig455_031763, Mlig455_051833, Mlig455_063612

Neo: -

Age: Down-Up-Down

 1.798 0.821 - 0.977 - - -

Mlig455_021985 {REF} {Length: 394} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.2} {RNA815_1698.1}

Mlig455_031763 {REF} {Length: 391} {TRANSSPLICED} {RNA1509_59895} {RNA1310_900.2} {RNA815_1698.1}

Mlig455_051833 {REF} {Length: 498} {TRANSSPLICED} {RNA1509_43937} {RNA1310_900.2} {RNA815_1698.1}

Mlig455_063612 {REF} {Length: 710} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_43937} {RNA1310_145253} {RNA815_1698.1}
31. MligTC455_46368 570 11.88 Mlig455_062172

Neo: Irradiation

Age: -

Region-enriched R4: 1.546/0.00720

 TRMT2A 1.797 0.955 - 0.842 - - - Mlig455_062172 {REF} {Length: 1467} {TRANSSPLICED} {Pfam: Methyltransferase domain [PF13847.8, score=19.6]} {Human: ENSG00000099899, TRMT2A, tRNA methyltransferase 2 homolog A, [Score=77.8, Expect=4e-15]; ENSG00000188917, TRMT2B, tRNA methyltransferase 2 homolog B, [Score=75.5, Expect=2e-14]} {Mouse: ENSMUSG00000067369, Trmt2b, TRM2 tRNA methyltransferase 2B, [Score=71.6, Expect=2e-13]; ENSMUSG00000098930, Trmt2a, TRM2 tRNA methyltransferase 2A, [Score=69.7, Expect=1e-12]; ENSMUSG00000022721, Trmt2a, TRM2 tRNA methyltransferase 2A, [Score=69.7, Expect=1e-12]} {Celegans: WBGene00019241, H24K24.4, [Score=48.5, Expect=3e-06]} {Smed: dd_Smed_v6_11602_0_1, dd_Smed_v6_11602_0_1, [Score=80.1, Expect=2e-16]} {RNA1509_8635} {RNA1310_19724} {RNA815_8550}
32. MligTC455_09903 33 0.68 Mlig455_051109

Neo: Irradiation

Age: Up-Down-Down

 WNT5A 1.796 - 0.807 0.989 - - - Mlig455_051109 {REF} {Length: 3244} {Pfam: wnt family [PF00110.21, score=260.2]} {Human: ENSG00000114251, WNT5A, Wnt family member 5A, [Score=247, Expect=1e-73]; ENSG00000111186, WNT5B, Wnt family member 5B, [Score=243, Expect=3e-72]} {Mouse: ENSMUSG00000021994, Wnt5a, wingless-type MMTV integration site family, member 5A, [Score=247, Expect=8e-74]; ENSMUSG00000030170, Wnt5b, wingless-type MMTV integration site family, member 5B, [Score=245, Expect=4e-73]} {Dmel: FBgn0010194, Wnt5, Wnt oncogene analog 5, [RH, Score=160, Expect=4e-40]} {Celegans: WBGene00000858, cwn-2, [Score=221, Expect=1e-64]} {Smed: dd_Smed_v6_15469_0_1, dd_Smed_v6_15469_0_1, [Score=243, Expect=9e-73]} {RNA1509_24293} {RNA1310_13535} {RNA815_8371}
33. MligTC455_23752 138 2.87 Mlig455_056854

Neo: -

Age: Up-Down-Down

 GRIK3 1.794 - - 0.956 - - 0.838 Mlig455_056854 {REF} {Length: 4616} {Pfam: Ligand-gated ion channel [PF00060.28, score=110.6]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=92.2]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=86.6]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=222, Expect=9e-60]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=219, Expect=6e-59]; ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=218, Expect=9e-59]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=217, Expect=4e-58]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=215, Expect=2e-57]; ENSG00000125675, GRIA3, glutamate ionotropic receptor AMPA type subunit 3, [Score=214, Expect=3e-57]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=212, Expect=3e-56]; ENSG00000182771, GRID1, glutamate ionotropic receptor delta type subunit 1, [Score=212, Expect=4e-56]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=211, Expect=6e-56]; ENSG00000105737, GRIK5, glutamate ionotropic receptor kainate type subunit 5, [Score=211, Expect=6e-56]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=223, Expect=5e-60]; ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=220, Expect=4e-59]; ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=217, Expect=2e-58]; ENSMUSG00000001986, Gria3, glutamate receptor, ionotropic, AMPA3 (alpha 3), [Score=216, Expect=6e-58]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=216, Expect=6e-58]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=214, Expect=4e-57]; ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=214, Expect=5e-57]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [RH, Score=294, Expect=8e-85]} {Celegans: WBGene00001618, glr-7, GLutamate Receptor family (AMPA), [RH, Score=320, Expect=6e-95]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [RH, Score=658, Expect=0.0]} {RNA1509_25374} {RNA1310_4098, RNA1509_25374} {RNA1509_25374, RNA815_19029}
34. MligTC455_03976 126 2.63 Mlig455_017286

Neo: Irradiation

Age: -

Region-specific R4: 6.338

Region-enriched R4: 3.931/0.00045

 1.793 - 0.808 0.985 - - - Mlig455_017286 {REF} {Length: 568} {Pfam: RNase H [PF00075.26, score=57.3]} {RNA1509_5045} {RNA1310_667.2} {RNA815_8147}
35. MligTC455_09732 364 7.58 Mlig455_064481

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.011

Region-enriched R4: 3.916/0.00020

 1.789 - 0.810 0.979 - - - Mlig455_064481 {REF} {Length: 854} {RNA1509_22397} {RNA1310_8664} {RNA815_59449}
36. MligTC455_22450 40 0.83 Mlig455_024092, Mlig455_033065

Neo: -

Age: -

 ASIC2, ASIC3 1.789 - - 0.990 - - 0.799

Mlig455_024092 {REF} {Length: 1894} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=190.8]} {Human: ENSG00000213199, ASIC3, acid sensing ion channel subunit 3, [Score=58.5, Expect=2e-08]; ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=57.4, Expect=5e-08]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=56.2, Expect=8e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=107, Expect=4e-24]} {RNA1310_43687}

Mlig455_033065 {REF} {Length: 2669} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=192.0]} {Human: ENSG00000108684, ASIC2, acid sensing ion channel subunit 2, [Score=60.8, Expect=5e-09]} {Mouse: ENSMUSG00000020704, Asic2, acid-sensing (proton-gated) ion channel 2, [Score=56.2, Expect=8e-08]; ENSMUSG00000023017, Asic1, acid-sensing (proton-gated) ion channel 1, [Score=54.7, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=108, Expect=1e-24]} {RNA1310_43687}
37. MligTC455_29446 56 1.17 Mlig455_061415

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=1.157

 1.788 0.829 - 0.959 - - - Mlig455_061415 {REF} {Length: 3889} {Pfam: OB-fold nucleic acid binding domain [PF01336.27, score=48.5]; Replication protein A OB domain [PF16900.7, score=46.7]; RecG wedge domain [PF17191.6, score=18.9]} {Smed: dd_Smed_v6_3342_0_1, dd_Smed_v6_3342_0_1, [Score=89.4, Expect=2e-19]} {RNA1509_10085} {RNA1310_6627.1, RNA1509_10085} {RNA1509_10085, RNA815_3343}
38. MligTC455_13800 174 3.62 Mlig455_025213, Mlig455_025646

Neo: -

Age: -

 BICDL1 1.787 - - 0.973 - - 0.814

Mlig455_025213 {REF} {Length: 3644} {TRANSSPLICED} {Pfam: Intermediate filament protein [PF00038.23, score=18.6]} {Human: ENSG00000135127, BICDL1, BICD family like cargo adaptor 1, [RH, Score=95.9, Expect=4e-20]} {Mouse: ENSMUSG00000041609, Bicdl1, BICD family like cargo adaptor 1, [RH, Score=95.5, Expect=4e-20]} {Dmel: FBgn0052137, CG32137, [RH, Score=100, Expect=1e-21]} {Smed: dd_Smed_v6_7219_0_1, dd_Smed_v6_7219_0_1, [RH, Score=129, Expect=1e-31]} {RNA1509_34033} {RNA1310_18300.1, RNA1509_34033} {RNA1509_34033, RNA815_35699}

Mlig455_025646 {REF} {Length: 3450} {Pfam: Intermediate filament protein [PF00038.23, score=18.6]} {Human: ENSG00000135127, BICDL1, BICD family like cargo adaptor 1, [RH, Score=95.9, Expect=5e-20]} {Mouse: ENSMUSG00000041609, Bicdl1, BICD family like cargo adaptor 1, [RH, Score=95.5, Expect=5e-20]} {Dmel: FBgn0052137, CG32137, [RH, Score=99.0, Expect=3e-21]} {Smed: dd_Smed_v6_7219_0_1, dd_Smed_v6_7219_0_1, [RH, Score=129, Expect=1e-31]} {RNA1509_34033} {RNA1310_18300.1} {RNA815_35699}
39. MligTC455_31535 324 6.75 Mlig455_059558

Neo: -

Age: Up-Down-Up

 1.786 0.828 - 0.958 - - - Mlig455_059558 {REF} {Length: 2663} {Pfam: NAD dependent epimerase/dehydratase family [PF01370.23, score=59.0]; GDP-mannose 4,6 dehydratase [PF16363.7, score=28.9]; RmlD substrate binding domain [PF04321.19, score=19.7]; NAD(P)H-binding [PF13460.8, score=18.5]; 3-beta hydroxysteroid dehydrogenase/isomerase family [PF01073.21, score=17.7]} {RNA1509_36496} {RNA1310_5934} {RNA815_37379}
40. MligTC455_51745 267 5.56 Mlig455_007920

Neo: -

Age: -

 FOXJ3 1.783 - - 0.976 - - 0.807 Mlig455_007920 {REF} {Length: 2476} {Pfam: Forkhead domain [PF00250.20, score=126.3]} {Human: ENSG00000198815, FOXJ3, forkhead box J3, [RH, Score=165, Expect=4e-46]} {Mouse: ENSMUSG00000032998, Foxj3, forkhead box J3, [RH, Score=164, Expect=5e-44]} {Dmel: FBgn0004567, slp2, sloppy paired 2, [Score=118, Expect=8e-29]} {Celegans: WBGene00001434, fkh-2, ForKHead transcription factor family, [Score=115, Expect=3e-29]} {Smed: dd_Smed_v6_12170_0_1, dd_Smed_v6_12170_0_1, [RH, Score=112, Expect=2e-26]} {RNA1509_19637, RNA1509_37021, RNA1509_41082} {RNA1310_12207, RNA1509_37021, RNA1509_41082} {RNA1509_37021, RNA1509_41082, RNA815_17037}
41. MligTC455_14698 87 1.81 Mlig455_016423, Mlig455_018959

Neo: -

Age: -

 1.781 - - 0.984 - - 0.797

Mlig455_016423 {REF} {Length: 2126} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=29.9]} {RNA1509_50390} {RNA1310_55547}

Mlig455_018959 {REF} {Length: 3176} {Pfam: Endonuclease-reverse transcriptase [PF14529.8, score=56.9]; RNase H [PF00075.26, score=47.4]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=23.8]; PHD-finger [PF00628.31, score=20.1]} {RNA1509_50390} {RNA1310_33666, RNA1509_50390}
42. MligTC455_25812 94 1.95 Mlig455_017558, Mlig455_030840, Mlig455_034038

Neo: -

Age: -

Region-enriched R4: 4.081/0.00065

 PRR9 1.779 - 0.788 0.991 - - -

Mlig455_017558 {REF} {Length: 1682} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=39.1]; Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeat [PF00023.32, score=32.2]; Ankyrin repeat [PF13606.8, score=24.4]} {RNA1509_6491} {RNA1310_37126} {RNA815_33363.1}

Mlig455_030840 {REF} {Length: 1690} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=39.1]; Ankyrin repeats (3 copies) [PF12796.9, score=36.7]; Ankyrin repeat [PF00023.32, score=32.2]; Ankyrin repeat [PF13606.8, score=24.4]} {RNA1509_6491} {RNA1310_62840} {RNA815_33363.1}

Mlig455_034038 {REF} {Length: 260} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=41.6, Expect=1e-05]}
43. MligTC455_44689 194 4.05 Mlig455_048802

Neo: -

Age: -

 NKRF 1.772 - - 0.985 0.787 - - Mlig455_048802 {REF} {Length: 3088} {TRANSSPLICED} {Pfam: XRN-Two Binding Domain, XTBD [PF11952.10, score=48.3]; G-patch domain [PF01585.25, score=30.8]; G-patch domain [PF12656.9, score=30.8]; R3H domain [PF01424.24, score=23.8]} {Human: ENSG00000186416, NKRF, NFKB repressing factor, [RH, Score=79.0, Expect=7e-15]} {Mouse: ENSMUSG00000044149, Nkrf, NF-kappaB repressing factor, [RH, Score=80.5, Expect=1e-15]} {Celegans: WBGene00013224, Y55D9A.2, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_10443_0_1, dd_Smed_v6_10443_0_1, [RH, Score=95.9, Expect=5e-21]} {RNA1509_22309} {RNA1310_17483.1, RNA1509_22309} {RNA1509_22309, RNA815_7028}
44. MligTC455_16005 97 2.02 Mlig455_018551, Mlig455_019423, Mlig455_058389

Neo: -

Age: -

 1.77 - - 0.990 - - 0.780

Mlig455_018551 {REF} {Length: 3430} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}

Mlig455_019423 {REF} {Length: 2545} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}

Mlig455_058389 {REF} {Length: 3494} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.1]} {RNA1509_42342} {RNA1310_4557} {RNA815_16034.1}
45. MligTC455_45413 673 14.03 Mlig455_027807, Mlig455_063509

Neo: -

Age: -

 1.767 - - - - 0.811 0.956

Mlig455_027807 {REF} {Length: 609} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54518} {RNA1310_28027, RNA1509_54518} {RNA1509_54518, RNA815_21383}

Mlig455_063509 {REF} {Length: 605} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_54518} {RNA1310_28027} {RNA815_21383}
46. MligTC455_30784 405 8.43 Mlig455_004151, Mlig455_017665, Mlig455_066961

Neo: Irradiation

Age: -

Region-enriched R5: 1.460/0.02276

 NEK2, PRR9 1.764 0.785 - 0.979 - - -

Mlig455_004151 {REF} {Length: 4735} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=153.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=80.1]; tRNA synthetases class I (R) [PF00750.21, score=63.6]; DALR anticodon binding domain [PF05746.17, score=41.9]; Kinase-like [PF14531.8, score=23.1]} {Human: ENSG00000117650, NEK2, NIMA related kinase 2, [Score=248, Expect=3e-74]} {Mouse: ENSMUSG00000110797, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [Score=239, Expect=2e-70]; ENSMUSG00000026622, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [Score=239, Expect=2e-70]} {Dmel: FBgn0029970, Nek2, [Score=194, Expect=8e-52]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=143, Expect=7e-35]} {Smed: dd_Smed_v6_5334_0_1, dd_Smed_v6_5334_0_1, [Score=152, Expect=5e-39]} {RNA1509_41013} {RNA1310_16846} {RNA815_14651}

Mlig455_017665 {REF} {Length: 528} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=44.3, Expect=1e-05]}

Mlig455_066961 {REF} {Length: 4870} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=197.5]; tRNA synthetases class I (R) [PF00750.21, score=167.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=123.5]; DALR anticodon binding domain [PF05746.17, score=52.3]; Kinase-like [PF14531.8, score=22.5]} {Human: ENSG00000117650, NEK2, NIMA related kinase 2, [Score=300, Expect=3e-92]} {Mouse: ENSMUSG00000110797, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [Score=291, Expect=2e-88]; ENSMUSG00000026622, Nek2, NIMA (never in mitosis gene a)-related expressed kinase 2, [Score=291, Expect=2e-88]} {Dmel: FBgn0029970, Nek2, [RH, Score=246, Expect=5e-69]} {Celegans: WBGene00008956, nekl-3, Serine/threonine-protein kinase nekl-3, [Score=163, Expect=2e-44]} {Smed: dd_Smed_v6_5334_0_1, dd_Smed_v6_5334_0_1, [RH, Score=254, Expect=1e-74]} {RNA1509_45663} {RNA1310_16846} {RNA815_14651}
47. MligTC455_04411 123 2.56 Mlig455_053007

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 7.470

Region-enriched R4: 5.651/0.00001

 1.763 - 0.792 0.971 - - - Mlig455_053007 {REF} {Length: 431} {NoTransDecoderORF} {RNA1509_17891} {RNA1310_11863} {RNA815_4614.2}
48. MligTC455_07690 319 6.66 Mlig455_010122, Mlig455_010224

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.539

Region-specific R4: 5.019

Region-enriched R4: 4.446/0.00000

 1.76 - 0.792 0.968 - - -

Mlig455_010122 {REF} {Length: 1585} {RNA1509_25591, RNA1509_3284} {RNA1310_12112, RNA1509_25591} {RNA1509_25591, RNA815_12301.2}

Mlig455_010224 {REF} {Length: 1287} {RNA1509_3284} {RNA1310_12112} {RNA815_12301.2}
49. MligTC455_04410 290 6.04 Mlig455_036793, Mlig455_036799

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.988

Region-enriched R4: 6.177/0.00000

 SLC7A2 1.758 - 0.796 0.962 - - -

Mlig455_036793 {REF} {Length: 2106} {Pfam: Amino acid permease [PF13520.8, score=130.0]; Amino acid permease [PF00324.23, score=101.8]; C-terminus of AA_permease [PF13906.8, score=52.6]} {Human: ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [Score=284, Expect=2e-86]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=280, Expect=2e-85]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=290, Expect=5e-89]} {Dmel: FBgn0036984, CG13248, [Score=307, Expect=2e-95]} {Celegans: WBGene00016806, C50D2.2, [Score=311, Expect=3e-98]} {Smed: dd_Smed_v6_8652_0_7, dd_Smed_v6_8652_0_7, [Score=417, Expect=2e-139]} {RNA1509_17891} {RNA1310_11863} {RNA815_4614.1}

Mlig455_036799 {REF} {Length: 2152} {Pfam: Amino acid permease [PF13520.8, score=128.8]; Amino acid permease [PF00324.23, score=102.1]; C-terminus of AA_permease [PF13906.8, score=52.6]} {Human: ENSG00000003989, SLC7A2, solute carrier family 7 member 2, [Score=281, Expect=2e-85]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=277, Expect=3e-84]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=286, Expect=6e-88]; ENSMUSG00000107871, AU018091, expressed sequence AU018091, [Score=273, Expect=4e-82]; ENSMUSG00000054753, AU018091, expressed sequence AU018091, [Score=273, Expect=4e-82]} {Dmel: FBgn0036984, CG13248, [Score=306, Expect=4e-95]} {Celegans: WBGene00016806, C50D2.2, [Score=311, Expect=6e-98]} {Smed: dd_Smed_v6_8652_0_1, dd_Smed_v6_8652_0_1, [Score=416, Expect=5e-139]} {RNA1509_17891} {RNA1310_11863, RNA1509_17891} {RNA1509_17891, RNA815_4614.1}
50. MligTC455_35057 168 3.5 Mlig455_034251

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.691

 FER 1.758 - - 0.995 - - 0.763 Mlig455_034251 {REF} {Length: 2802} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=213.3]; Protein kinase domain [PF00069.27, score=79.6]} {Human: ENSG00000151422, FER, FER tyrosine kinase, [Score=197, Expect=9e-59]; ENSG00000182511, FES, FES proto-oncogene, tyrosine kinase, [Score=196, Expect=1e-58]} {Mouse: ENSMUSG00000053158, Fes, feline sarcoma oncogene, [Score=196, Expect=2e-58]; ENSMUSG00000000127, Fer, fer (fms/fps related) protein kinase, [Score=195, Expect=3e-58]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=202, Expect=9e-61]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=161, Expect=6e-50]} {Smed: dd_Smed_v6_6272_0_1, dd_Smed_v6_6272_0_1, [Score=159, Expect=6e-46]} {RNA1509_41151} {RNA1310_3040.2} {RNA815_19756}
51. MligTC455_48922 264 5.5 Mlig455_043459

Neo: -

Age: -

 1.75 - - 0.968 - - 0.782 Mlig455_043459 {REF} {Length: 979} {Pfam: Calcium-activated potassium channel, beta subunit [PF03185.17, score=69.8]} {Smed: dd_Smed_v6_14020_0_1, dd_Smed_v6_14020_0_1, [RH, Score=136, Expect=2e-40]} {RNA1509_45175} {RNA1310_38004.1, RNA1509_45175} {RNA1509_45175, RNA815_18116}
52. MligTC455_07208 41 0.86 Mlig455_013021

Neo: -

Age: -

 1.746 - - 0.983 - - 0.763 Mlig455_013021 {REF} {Length: 876} {Pfam: Lectin C-type domain [PF00059.23, score=28.4]} {Smed: dd_Smed_v6_42798_0_1, dd_Smed_v6_42798_0_1, [Score=60.1, Expect=6e-11]} {RNA1509_20946} {RNA1310_57972} {RNA815_4785.4}
53. MligTC455_42417 108 2.25 Mlig455_028193

Neo: -

Age: -

 SCNN1A 1.745 - - 0.959 - - 0.786 Mlig455_028193 {REF} {Length: 3768} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=115.2]} {Human: ENSG00000111319, SCNN1A, sodium channel epithelial 1 alpha subunit, [Score=52.8, Expect=6e-07]} {Celegans: WBGene00006832, unc-105, Degenerin-like protein unc-105, [Score=55.1, Expect=5e-08]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=215, Expect=7e-64]} {RNA1310_86143} {RNA815_32816}
54. MligTC455_38404 102 2.12 Mlig455_060454

Neo: -

Age: Up-Down-Down

Region-enriched R4: 4.330/0.00511

 1.74 - 0.759 0.981 - - - Mlig455_060454 {REF} {Length: 4712} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=110.7]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=108.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.0]; Integrase zinc binding domain [PF17921.3, score=60.5]; Integrase core domain [PF00665.28, score=54.3]; H2C2 zinc finger [PF09337.12, score=29.7]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.1]; Retrotransposon gag protein [PF03732.19, score=20.3]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=2e-75]} {RNA1509_19088} {RNA1310_807} {RNA815_13859}
55. MligTC455_36599 36 0.75 Mlig455_030316, Mlig455_034137

Neo: -

Age: -

 1.731 - - - 0.772 - 0.959

Mlig455_030316 {REF} {Length: 755} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_60503} {RNA815_39433}

Mlig455_034137 {REF} {Length: 518} {NoTransDecoderORF} {RNA1509_51255} {RNA1310_60503} {RNA815_39433}
56. MligTC455_52164 49 1.01 Mlig455_019248

Neo: -

Age: Down-Up-Up

Region-enriched R1: 12.972/0.02781
Region-enriched R4: 6.179/0.01048

 1.73 - - 0.986 - - 0.744 Mlig455_019248 {REF} {Length: 923} {Celegans: WBGene00015646, mlt-10, [Score=98.2, Expect=4e-23]} {RNA1509_24360} {RNA1310_75398} {RNA815_40298}
57. MligTC455_35058 165 3.43 Mlig455_034250, Mlig455_067286

Neo: -

Age: -

 FER 1.726 - - 0.995 - - 0.731

Mlig455_034250 {REF} {Length: 1053} {Pfam: SH2 domain [PF00017.26, score=45.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=29.1]; Protein kinase domain [PF00069.27, score=24.2]} {Human: ENSG00000151422, FER, FER tyrosine kinase, [Score=122, Expect=1e-30]} {Mouse: ENSMUSG00000053158, Fes, feline sarcoma oncogene, [Score=126, Expect=2e-32]; ENSMUSG00000000127, Fer, fer (fms/fps related) protein kinase, [Score=120, Expect=2e-30]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=120, Expect=1e-31]} {Celegans: WBGene00022780, ZK622.1, Tyrosine-protein kinase, [Score=100, Expect=5e-24]} {Smed: dd_Smed_v6_6039_0_1, dd_Smed_v6_6039_0_1, [Score=65.9, Expect=4e-12]} {RNA1509_41151} {RNA1310_3040.1} {RNA815_24785}

Mlig455_067286 {REF} {Length: 4682} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=263.8]; Protein kinase domain [PF00069.27, score=114.9]; SH2 domain [PF00017.26, score=43.7]; ABC1 atypical kinase-like domain [PF03109.18, score=19.1]} {Human: ENSG00000151422, FER, FER tyrosine kinase, [Score=315, Expect=2e-94]; ENSG00000182511, FES, FES proto-oncogene, tyrosine kinase, [Score=308, Expect=7e-92]} {Mouse: ENSMUSG00000000127, Fer, fer (fms/fps related) protein kinase, [Score=321, Expect=2e-97]; ENSMUSG00000053158, Fes, feline sarcoma oncogene, [Score=315, Expect=2e-94]} {Dmel: FBgn0000723, FER, FER tyrosine kinase, [Score=309, Expect=2e-97]} {Celegans: WBGene00022780, ZK622.1, Tyrosine-protein kinase, [Score=224, Expect=2e-65]} {Smed: dd_Smed_v6_6039_0_1, dd_Smed_v6_6039_0_1, [Score=204, Expect=2e-57]} {RNA1509_15829} {RNA1310_3040.2} {RNA815_12249}
58. MligTC455_36792 641 13.36 Mlig455_040816, Mlig455_040917, Mlig455_049184

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.297

Region-specific R4: 6.507

Region-enriched R4: 5.509/0.00000

 ADAM17 1.724 - 0.750 0.974 - - -

Mlig455_040816 {REF} {Length: 3099} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=77.4]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=62.9]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=37.9]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=21.6]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=21.2]; Reprolysin family propeptide [PF01562.21, score=20.4]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [Score=260, Expect=3e-75]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [Score=257, Expect=4e-74]} {Dmel: FBgn0039734, Tace, [Score=270, Expect=8e-80]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [Score=183, Expect=6e-49]} {Smed: dd_Smed_v6_10958_0_1, dd_Smed_v6_10958_0_1, [Score=55.8, Expect=5e-08]} {RNA1509_17096, RNA1509_45736} {RNA1310_6968, RNA1509_17096, RNA1509_45736} {RNA1509_17096, RNA1509_45736, RNA815_7112.1}

Mlig455_040917 {REF} {Length: 3504} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=77.1]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=62.7]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=37.6]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=21.4]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=20.7]; Reprolysin family propeptide [PF01562.21, score=20.2]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [Score=266, Expect=1e-76]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [Score=258, Expect=3e-74]} {Dmel: FBgn0039734, Tace, [Score=271, Expect=6e-80]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [Score=185, Expect=3e-49]} {Smed: dd_Smed_v6_10958_0_1, dd_Smed_v6_10958_0_1, [Score=56.2, Expect=5e-08]} {RNA1509_17096} {RNA1310_6968} {RNA815_7112.1}

Mlig455_049184 {REF} {Length: 2606} {Pfam: Metallo-peptidase family M12 [PF13688.8, score=77.3]; Metallo-peptidase family M12B Reprolysin-like [PF13574.8, score=62.8]; Reprolysin (M12B) family zinc metalloprotease [PF01421.21, score=30.6]; Metallo-peptidase family M12B Reprolysin-like [PF13582.8, score=21.6]; Metallo-peptidase family M12B Reprolysin-like [PF13583.8, score=21.3]} {Human: ENSG00000151694, ADAM17, ADAM metallopeptidase domain 17, [Score=217, Expect=8e-60]} {Mouse: ENSMUSG00000052593, Adam17, a disintegrin and metallopeptidase domain 17, [Score=211, Expect=7e-58]} {Dmel: FBgn0039734, Tace, [Score=223, Expect=9e-63]} {Celegans: WBGene00000075, adm-4, ADAM (Disintegrin plus metalloprotease) family, [Score=137, Expect=1e-33]} {RNA1509_45736} {RNA1310_6968} {RNA815_7112.1}
59. MligTC455_49089 458 9.53 Mlig455_011594

Neo: -

Age: Up-Down-Up

Region-enriched R4: 1.776/0.00913

 RAC1 1.722 0.759 - 0.963 - - - Mlig455_011594 {REF} {Length: 1589} {Pfam: Ras family [PF00071.24, score=159.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=69.7]; ADP-ribosylation factor family [PF00025.23, score=26.0]} {Human: ENSG00000136238, RAC1, Rac family small GTPase 1, [Score=220, Expect=3e-73]; ENSG00000128340, RAC2, Rac family small GTPase 2, [Score=218, Expect=3e-72]; ENSG00000169750, RAC3, Rac family small GTPase 3, [Score=217, Expect=4e-72]} {Mouse: ENSMUSG00000001847, Rac1, Rac family small GTPase 1, [Score=220, Expect=2e-73]; ENSMUSG00000018012, Rac3, Rac family small GTPase 3, [Score=217, Expect=3e-72]; ENSMUSG00000033220, Rac2, Rac family small GTPase 2, [Score=216, Expect=6e-72]} {Dmel: FBgn0010333, Rac1, [Score=221, Expect=8e-74]} {Celegans: WBGene00000424, ced-10, Ras-related protein ced-10, [Score=224, Expect=2e-75]} {Smed: dd_Smed_v6_610_0_1, dd_Smed_v6_610_0_1, [Score=221, Expect=4e-74]} {RNA1509_59229, RNA1509_7916} {RNA1310_16594, RNA1509_59229, RNA1509_7916} {RNA1509_59229, RNA1509_7916, RNA815_8276}
60. MligTC455_50156 379 7.9 Mlig455_061886

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.454

Regeneration-upregulated BL: 2.171

Regeneration-enriched BL: 2.171

 BEST2 1.718 - - 0.983 - - 0.735 Mlig455_061886 {REF} {Length: 2189} {Pfam: Bestrophin, RFP-TM, chloride channel [PF01062.23, score=157.1]} {Human: ENSG00000039987, BEST2, bestrophin 2, [Score=102, Expect=2e-22]} {Mouse: ENSMUSG00000052819, Best2, bestrophin 2, [Score=102, Expect=5e-23]} {Dmel: FBgn0040238, Best1, Bestrophin 1, [Score=181, Expect=1e-49]} {Celegans: WBGene00014989, best-23, Bestrophin homolog, [Score=144, Expect=3e-38]} {Smed: dd_Smed_v6_3859_0_1, dd_Smed_v6_3859_0_1, [Score=233, Expect=5e-71]} {RNA1509_12991, RNA1509_40942} {RNA1310_14129.1, RNA1509_12991, RNA1509_40942} {RNA1509_12991, RNA1509_40942, RNA815_5240}
61. MligTC455_25810 160 3.34 Mlig455_007369

Neo: -

Age: logFC(26M/2M)=-0.475

 1.717 - - 0.980 - - 0.737 Mlig455_007369 {REF} {Length: 1460} {Pfam: Glycosyltransferase family 92 [PF01697.29, score=112.7]; Glycosyl transferase family 2 [PF13704.8, score=24.3]} {Celegans: WBGene00012941, Y47D3B.4, [Score=53.1, Expect=3e-07]} {Smed: dd_Smed_v6_5401_0_1, dd_Smed_v6_5401_0_1, [Score=197, Expect=4e-58]} {RNA1310_16379.1} {RNA815_14941.1}
62. MligTC455_16004 112 2.34 Mlig455_018566

Neo: -

Age: -

 1.714 - - 0.962 0.752 - - Mlig455_018566 {REF} {Length: 1614} {RNA1310_59905} {RNA815_19359}
63. MligTC455_33607 482 10.03 Mlig455_064683

Neo: Int S/G2/M

Age: -

 KDM1A 1.713 0.762 - 0.951 - - - Mlig455_064683 {REF} {Length: 3352} {TRANSSPLICED} {Pfam: Flavin containing amine oxidoreductase [PF01593.26, score=195.6]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=57.8]; FAD dependent oxidoreductase [PF01266.26, score=30.1]; Thi4 family [PF01946.19, score=29.4]; FAD binding domain [PF00890.26, score=28.9]; FAD binding domain [PF01494.21, score=25.0]; FAD dependent oxidoreductase [PF12831.9, score=23.6]; HI0933-like protein [PF03486.16, score=21.0]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.5]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=20.1]} {Human: ENSG00000004487, KDM1A, lysine demethylase 1A, [Score=114, Expect=9e-26]} {Mouse: ENSMUSG00000036940, Kdm1a, lysine (K)-specific demethylase 1A, [Score=115, Expect=5e-26]} {Dmel: FBgn0260397, Su(var)3-3, Suppressor of variegation 3-3, [Score=97.8, Expect=1e-20]} {Celegans: WBGene00000137, amx-1, Amine oxidase family member 1, [Score=106, Expect=1e-23]} {Smed: dd_Smed_v6_10899_0_1, dd_Smed_v6_10899_0_1, [RH, Score=415, Expect=1e-136]} {RNA1509_26570} {RNA1310_9348} {RNA815_2019}
64. MligTC455_38403 118 2.45 Mlig455_011987

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-1.147

Region-enriched R4: 3.588/0.01930

 1.711 - 0.744 0.967 - - - Mlig455_011987 {REF} {Length: 3789} {Pfam: Retrotransposon gag protein [PF03732.19, score=23.1]} {RNA1509_19088, RNA1509_38918} {RNA1310_807, RNA1509_19088, RNA1509_38918} {RNA1509_19088, RNA1509_38918, RNA815_13859}
65. MligTC455_34700 158 3.28 Mlig455_037094

Neo: -

Age: Down-Down-Up

 HGD 1.709 0.954 - - - 0.755 - Mlig455_037094 {REF} {Length: 3523} {Pfam: homogentisate 1,2-dioxygenase [PF04209.15, score=195.6]} {Human: ENSG00000113924, HGD, homogentisate 1,2-dioxygenase, [Score=178, Expect=4e-54]} {Mouse: ENSMUSG00000022821, Hgd, homogentisate 1, 2-dioxygenase, [Score=181, Expect=4e-55]} {Dmel: FBgn0040211, hgo, homogentisate 1,2-dioxygenase, [Score=180, Expect=5e-55]} {Celegans: WBGene00001843, hgo-1, Homogentisate 1,2-dioxygenase, [Score=186, Expect=2e-57]} {Smed: dd_Smed_v6_2908_0_1, dd_Smed_v6_2908_0_1, [Score=157, Expect=3e-46]} {RNA1509_15283} {RNA1310_18945} {RNA815_2326}
66. MligTC455_18697 281 5.85 Mlig455_009060

Neo: -

Age: Down-Up-Down

 NEK11 1.706 0.951 - - - - 0.755 Mlig455_009060 {REF} {Length: 2783} {Pfam: Protein kinase domain [PF00069.27, score=137.6]; Ankyrin repeats (3 copies) [PF12796.9, score=97.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=97.3]; Ankyrin repeats (many copies) [PF13637.8, score=60.3]; Ankyrin repeat [PF13606.8, score=54.3]; Ankyrin repeat [PF00023.32, score=53.5]; Ankyrin repeats (many copies) [PF13857.8, score=43.8]; Kinase-like [PF14531.8, score=20.0]} {Human: ENSG00000114670, NEK11, NIMA related kinase 11, [Score=151, Expect=8e-39]} {Mouse: ENSMUSG00000035032, Nek11, NIMA (never in mitosis gene a)-related expressed kinase 11, [Score=145, Expect=3e-36]} {Dmel: FBgn0036896, wnd, wallenda, [Score=97.4, Expect=1e-20]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=108, Expect=4e-24]} {Smed: dd_Smed_v6_10144_0_4, dd_Smed_v6_10144_0_4, [Score=119, Expect=1e-27]} {RNA1310_7330.1} {RNA815_3574}
67. MligTC455_27032 114 2.37 Mlig455_028640

Neo: -

Age: -

 1.706 - - 0.990 - - 0.716 Mlig455_028640 {REF} {Length: 7331} {RNA1509_51520} {RNA1310_36812, RNA1509_51520} {RNA1509_51520, RNA815_27203}
68. MligTC455_13099 93 1.93 Mlig455_057504

Neo: -

Age: -

 1.704 - - 0.956 - - 0.748 Mlig455_057504 {REF} {Length: 2002} {RNA1310_15168} {RNA815_31864}
69. MligTC455_54111 330 6.87 Mlig455_031536

Neo: Int S/G2/M

Age: Down-Up-Down

Region-specific R4: 4.175

Region-enriched R4: 4.555/0.00000

 CHMP1B 1.703 0.752 - 0.951 - - - Mlig455_031536 {REF} {Length: 841} {TRANSSPLICED} {Pfam: Snf7 [PF03357.23, score=58.4]} {Human: ENSG00000255112, CHMP1B, charged multivesicular body protein 1B, [Score=211, Expect=3e-69]} {Mouse: ENSMUSG00000031242, 2610002M06Rik, RIKEN cDNA 2610002M06 gene, [Score=211, Expect=1e-69]; ENSMUSG00000109901, Chmp1b, charged multivesicular body protein 1B, [Score=209, Expect=8e-69]} {Dmel: FBgn0036805, Chmp1, Charged multivesicular body protein 1, [Score=232, Expect=7e-78]} {Celegans: WBGene00017735, did-2, Doa4-Independent Degradation, homologous to yeast Did2, [Score=225, Expect=3e-75]} {Smed: dd_Smed_v6_630_0_1, dd_Smed_v6_630_0_1, [Score=236, Expect=1e-79]} {RNA1509_28724} {RNA1310_41507, RNA1509_28724} {RNA1509_28724, RNA815_20010.2}
70. MligTC455_49260 767 15.98 Mlig455_027373, Mlig455_069826

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 2.094

Regeneration-enriched BL: 2.094

 MRPL2 1.702 0.723 - 0.979 - - -

Mlig455_027373 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=54.2]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=23.2]} {Human: ENSG00000112651, MRPL2, mitochondrial ribosomal protein L2, [RH, Score=109, Expect=5e-27]} {Mouse: ENSMUSG00000002767, Mrpl2, mitochondrial ribosomal protein L2, [RH, Score=113, Expect=1e-28]} {Dmel: FBgn0036135, mRpL2, mitochondrial ribosomal protein L2, [RH, Score=128, Expect=2e-34]} {Celegans: WBGene00018932, mrpl-2, Mitochondrial Ribosomal Protein, Large, [RH, Score=103, Expect=3e-25]} {Smed: dd_Smed_v6_2712_3_1, dd_Smed_v6_2712_3_1, [RH, Score=191, Expect=3e-58]} {RNA1509_24598, RNA1509_25714} {RNA1310_26184.2, RNA1509_24598, RNA1509_25714} {RNA1509_24598, RNA1509_25714, RNA815_13085}

Mlig455_069826 {REF} {Length: 2600} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=54.2]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=23.2]} {Human: ENSG00000112651, MRPL2, mitochondrial ribosomal protein L2, [RH, Score=109, Expect=5e-27]} {Mouse: ENSMUSG00000002767, Mrpl2, mitochondrial ribosomal protein L2, [RH, Score=113, Expect=1e-28]} {Dmel: FBgn0036135, mRpL2, mitochondrial ribosomal protein L2, [RH, Score=128, Expect=2e-34]} {Celegans: WBGene00018932, mrpl-2, Mitochondrial Ribosomal Protein, Large, [RH, Score=103, Expect=3e-25]} {Smed: dd_Smed_v6_2712_3_1, dd_Smed_v6_2712_3_1, [RH, Score=191, Expect=3e-58]} {RNA1509_24598, RNA1509_47147, RNA1509_49769} {RNA1310_26184.2, RNA1509_47147, RNA1509_49769} {RNA1509_47147, RNA1509_49769, RNA815_13085}
71. MligTC455_12696 173 3.61 Mlig455_014203

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.458

 1.699 0.965 - - - - 0.734 Mlig455_014203 {REF} {Length: 1230} {RNA1310_25672.1}
72. MligTC455_16524 661 13.77 Mlig455_050300

Neo: -

Age: logFC(26M/2M)=-0.581

Region-enriched R3: 2.041/0.01248

 1.693 0.702 - 0.991 - - - Mlig455_050300 {REF} {Length: 1403} {RNA1509_35673, RNA1509_45798, RNA1509_5988} {RNA1310_23775, RNA1509_35673, RNA1509_45798, RNA1509_5988} {RNA1509_35673, RNA1509_45798, RNA1509_5988, RNA815_15000.1}
73. MligTC455_23034 523 10.9 Mlig455_052531, Mlig455_069097

Neo: Germline

Age: Up-Down-Down

 1.689 - 0.707 0.982 - - -

Mlig455_052531 {REF} {Length: 2226} {RNA1509_16734, RNA1509_18187, RNA1509_33695} {RNA1310_372, RNA1509_16734, RNA1509_18187, RNA1509_33695} {RNA1509_16734, RNA1509_18187, RNA1509_33695, RNA815_8220.1}

Mlig455_069097 {REF} {Length: 1866} {RNA1509_16734} {RNA1310_372} {RNA815_8220.1}
74. MligTC455_38657 292 6.08 Mlig455_021581

Neo: -

Age: -

 CPLX1 1.688 0.716 - - - - 0.972 Mlig455_021581 {REF} {Length: 2085} {Pfam: Synaphin protein [PF05835.14, score=132.9]} {Human: ENSG00000168993, CPLX1, complexin 1, [Score=52.4, Expect=8e-09]; ENSG00000145920, CPLX2, complexin 2, [Score=50.8, Expect=1e-08]} {Mouse: ENSMUSG00000033615, Cplx1, complexin 1, [Score=53.5, Expect=2e-09]} {Dmel: FBgn0041605, cpx, complexin, [RH, Score=90.1, Expect=1e-23]} {Celegans: WBGene00022271, cpx-1, Putative complexin-1, [RH, Score=99.4, Expect=2e-27]} {Smed: dd_Smed_v6_9918_0_1, dd_Smed_v6_9918_0_1, [Score=94.4, Expect=2e-25]} {RNA1509_37151, RNA1509_38047} {RNA1310_51275, RNA1509_38047} {RNA1509_38047, RNA815_22799}
75. MligTC455_50660 81 1.7 Mlig455_019591

Neo: -

Age: -

 SLC9B2 1.688 - - 0.971 - - 0.717 Mlig455_019591 {REF} {Length: 2686} {Pfam: Sodium/hydrogen exchanger family [PF00999.23, score=30.0]} {Human: ENSG00000164038, SLC9B2, solute carrier family 9 member B2, [Score=124, Expect=1e-31]} {Mouse: ENSMUSG00000037994, Slc9b2, solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2, [Score=116, Expect=1e-28]; ENSMUSG00000050150, Slc9b1, solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1, [Score=112, Expect=2e-27]} {Dmel: FBgn0263390, Nha2, Na[+]/H[+] hydrogen antiporter 2, [Score=113, Expect=1e-27]} {Celegans: WBGene00009618, F41E7.2, [Score=70.9, Expect=2e-13]} {Smed: dd_Smed_v6_7736_0_1, dd_Smed_v6_7736_0_1, [Score=148, Expect=1e-43]} {RNA1509_34461} {RNA1310_39553.1} {RNA815_32589}
76. MligTC455_29991 55 1.14 Mlig455_035129, Mlig455_040144

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.706

 1.687 - - - 0.719 - 0.968

Mlig455_035129 {REF} {Length: 406} {Pfam: Mab-21 protein [PF03281.16, score=26.3]} {RNA1509_26004} {RNA1310_36482} {RNA815_1664.2}

Mlig455_040144 {REF} {Length: 2361} {Pfam: Mab-21 protein [PF03281.16, score=40.1]} {RNA1509_26004} {RNA1310_3906.1} {RNA815_1664.1}
77. MligTC455_36451 93 1.94 Mlig455_019217

Neo: -

Age: -

 FBXW7 1.686 - - 0.984 0.702 - - Mlig455_019217 {REF} {Length: 2707} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=132.2]; F-box-like [PF12937.9, score=48.0]; F-box domain [PF00646.35, score=32.2]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=23.4]; Nucleoporin Nup120/160 [PF11715.10, score=22.5]} {Human: ENSG00000109670, FBXW7, F-box and WD repeat domain containing 7, [RH, Score=430, Expect=5e-143]} {Mouse: ENSMUSG00000028086, Fbxw7, F-box and WD-40 domain protein 7, [RH, Score=429, Expect=8e-143]} {Dmel: FBgn0041171, ago, archipelago, [RH, Score=415, Expect=2e-131]} {Celegans: WBGene00004767, sel-10, F-box/WD repeat-containing protein sel-10, [RH, Score=310, Expect=3e-98]} {Smed: dd_Smed_v6_8211_0_1, dd_Smed_v6_8211_0_1, [RH, Score=280, Expect=1e-88]} {RNA1509_19180, RNA1509_52969} {RNA1310_4381, RNA1509_19180, RNA1509_52969} {RNA1509_19180, RNA1509_52969, RNA815_6050}
78. MligTC455_46241 700 14.59 Mlig455_021193, Mlig455_028384, Mlig455_035962, Mlig455_056116, Mlig455_056268

Neo: -

Age: Down-Up-Down

 1.683 - - 0.980 - - 0.703

Mlig455_021193 {REF} {Length: 400} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45287} {RNA1310_90539} {RNA815_49421}

Mlig455_028384 {REF} {Length: 999} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45287} {RNA1310_22899.1} {RNA815_49421}

Mlig455_035962 {REF} {Length: 1078} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45287} {RNA1310_22899.1} {RNA815_38929}

Mlig455_056116 {REF} {Length: 1084} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45287} {RNA1310_22899.1} {RNA815_38929}

Mlig455_056268 {REF} {Length: 983} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45287} {RNA1310_22899.1} {RNA815_49421}
79. MligTC455_45698 585 12.18 Mlig455_035368

Neo: Neoblast

Age: -

 1.68 0.728 - 0.952 - - - Mlig455_035368 {REF} {Length: 1975} {TRANSSPLICED} {RNA1509_32885} {RNA1310_36246.1, RNA1509_32885} {RNA1509_32885, RNA815_24121}
80. MligTC455_19098 140 2.92 Mlig455_025228, Mlig455_025251

Neo: -

Age: Up-Down-Up

Region-enriched R2: 3.060/0.04934

 DAXX 1.675 - - 0.974 - - 0.701

Mlig455_025228 {REF} {Length: 5839} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=46.0]} {Human: ENSG00000227046, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000206279, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000206206, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000204209, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]; ENSG00000231617, DAXX, death domain associated protein, [Score=77.0, Expect=1e-13]} {Mouse: ENSMUSG00000002307, Daxx, Fas death domain-associated protein, [Score=84.0, Expect=6e-16]} {Dmel: FBgn0053696, CNMaR, CNMamide Receptor, [Score=68.2, Expect=2e-11]} {Celegans: WBGene00010986, sprr-1, Sex Peptide Receptor (Drosophila) Related, [Score=56.2, Expect=1e-07]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [RH, Score=222, Expect=1e-63]} {RNA1509_25153} {RNA1310_7064.1} {RNA815_18101}

Mlig455_025251 {REF} {Length: 3683} {Pfam: Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=18.7]} {Smed: dd_Smed_v6_13282_0_1, dd_Smed_v6_13282_0_1, [Score=159, Expect=4e-44]} {RNA1509_60180} {RNA1310_18827} {RNA815_22334}
81. MligTC455_28684 179 3.74 Mlig455_027569

Neo: -

Age: Down-Up-Up

 1.671 0.962 - - - - 0.709 Mlig455_027569 {REF} {Length: 1247} {RNA1509_49958} {RNA1310_47608, RNA1509_49958} {RNA1509_49958, RNA815_33601}
82. MligTC455_16515 328 6.84 Mlig455_025215

Neo: -

Age: Up-Down-Up

Region-specific R4: 3.768

Region-enriched R3: 2.309/0.00099
Region-enriched R4: 1.811/0.02291

 1.668 - 0.707 0.961 - - - Mlig455_025215 {REF} {Length: 1677} {Pfam: N-formylglutamate amidohydrolase [PF05013.14, score=35.8]} {RNA1509_20433} {RNA1310_23627.3} {RNA815_15550}
83. MligTC455_36609 196 4.08 Mlig455_018538

Neo: -

Age: -

 ANKRD18B 1.664 0.964 - - - - 0.700 Mlig455_018538 {REF} {Length: 4748} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=80.9]; Ankyrin repeats (many copies) [PF13637.8, score=66.0]; Ankyrin repeat [PF00023.32, score=58.7]; Ankyrin repeats (many copies) [PF13857.8, score=55.5]; Ankyrin repeat [PF13606.8, score=52.9]} {Human: ENSG00000230453, ANKRD18B, ankyrin repeat domain 18B, [RH, Score=105, Expect=4e-22]} {Mouse: ENSMUSG00000022246, Rai14, retinoic acid induced 14, [Score=100, Expect=8e-21]; ENSMUSG00000020481, Ankrd36, ankyrin repeat domain 36, [Score=96.3, Expect=2e-19]; ENSMUSG00000029517, Ankrd7, ankyrin repeat domain 7, [Score=95.9, Expect=5e-21]} {Dmel: FBgn0037759, CG8526, [Score=68.9, Expect=2e-11]} {Celegans: WBGene00004053, tank-1, Tankyrase-like protein, [Score=72.0, Expect=3e-12]} {Smed: dd_Smed_v6_7813_0_1, dd_Smed_v6_7813_0_1, [Score=82.4, Expect=6e-16]} {RNA1509_17141} {RNA1310_571} {RNA815_5717}
84. MligTC455_05870 60 1.25 Mlig455_062138

Neo: -

Age: -

 1.662 0.953 - - - - 0.709 Mlig455_062138 {REF} {Length: 1049} {NoTransDecoderORF} {RNA1310_117144}
85. MligTC455_20677 153 3.19 Mlig455_065028

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.263

 ARPC2 0.999 - - 0.999 - - - Mlig455_065028 {REF} {Length: 2143} {Pfam: Arp2/3 complex, 34 kD subunit p34-Arc [PF04045.16, score=310.3]} {Human: ENSG00000163466, ARPC2, actin related protein 2/3 complex subunit 2, [RH, Score=382, Expect=2e-133]} {Mouse: ENSMUSG00000006304, Arpc2, actin related protein 2/3 complex, subunit 2, [RH, Score=384, Expect=2e-134]} {Dmel: FBgn0032859, Arpc2, Actin-related protein 2/3 complex, subunit 2, [RH, Score=380, Expect=2e-133]} {Celegans: WBGene00021170, arx-4, Probable actin-related protein 2/3 complex subunit 2, [RH, Score=358, Expect=2e-124]} {Smed: dd_Smed_v6_693_0_1, dd_Smed_v6_693_0_1, [RH, Score=321, Expect=1e-109]} {RNA1509_1503, RNA1509_35964, RNA1509_39058} {RNA1310_13749, RNA1509_1503, RNA1509_35964, RNA1509_39058} {RNA1509_1503, RNA1509_35964, RNA1509_39058, RNA815_6029}
86. MligTC455_06546 182 3.78 Mlig455_045331

Neo: -

Age: -

 0.996 - - 0.996 - - - Mlig455_045331 {REF} {Length: 699} {NoTransDecoderORF} {RNA1310_37699} {RNA815_23188}
87. MligTC455_22695 194 4.03 Mlig455_007727, Mlig455_007802

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 3.558/0.00154

 0.996 - - 0.996 - - -

Mlig455_007727 {REF} {Length: 1893} {RNA1509_53615} {RNA1310_31038} {RNA815_33827}

Mlig455_007802 {REF} {Length: 2975} {Smed: dd_Smed_v6_5505_0_1, dd_Smed_v6_5505_0_1, [Score=47.4, Expect=1e-05]} {RNA1509_53615} {RNA1310_31038} {RNA815_29415}
88. MligTC455_19108 277 5.78 Mlig455_002320

Neo: Int S/G2/M

Age: -

Region-enriched R4: 1.754/0.03282
Region-enriched R5: 1.455/0.01966

 PSMC3IP 0.995 - - 0.995 - - - Mlig455_002320 {REF} {Length: 1692} {TRANSSPLICED} {Pfam: TBPIP/Hop2 winged helix domain [PF07106.15, score=92.3]; Leucine zipper with capping helix domain [PF18517.3, score=39.8]; Filament-like plant protein, long coiled-coil [PF05911.13, score=21.4]; Penicillinase repressor [PF03965.18, score=19.7]} {Human: ENSG00000131470, PSMC3IP, PSMC3 interacting protein, [RH, Score=130, Expect=4e-37]} {Mouse: ENSMUSG00000019303, Psmc3ip, proteasome (prosome, macropain) 26S subunit, ATPase 3, interacting protein, [RH, Score=147, Expect=9e-44]} {Smed: dd_Smed_v6_15163_0_1, dd_Smed_v6_15163_0_1, [RH, Score=138, Expect=1e-40]} {RNA1509_18951, RNA1509_36312} {RNA1310_38683, RNA1509_18951, RNA1509_36312} {RNA1509_18951, RNA1509_36312, RNA815_16821}
89. MligTC455_34062 93 1.95 Mlig455_051516

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=2.827

 0.995 - - 0.995 - - - Mlig455_051516 {REF} {Length: 13730} {Pfam: SecA DEAD-like domain [PF07517.16, score=86.6]; SecA preprotein cross-linking domain [PF01043.22, score=21.1]} {RNA1310_21331} {RNA815_28500}
90. MligTC455_32432 118 2.46 Mlig455_014378

Neo: -

Age: -

 0.994 - - 0.994 - - - Mlig455_014378 {REF} {Length: 1456} {TRANSSPLICED} {RNA1509_58713} {RNA1310_36304} {RNA815_14805}
91. MligTC455_29056 214 4.46 Mlig455_005934

Neo: Int S/G2/M

Age: Up-Up-Down

 0.993 - - 0.993 - - - Mlig455_005934 {REF} {Length: 3571} {Mouse: ENSMUSG00000044581, 4932415D10Rik, RIKEN cDNA 4932415D10 gene, [Score=54.7, Expect=7e-07]} {RNA1509_15781} {RNA1310_3922, RNA1509_15781} {RNA1509_15781, RNA815_5825}
92. MligTC455_43663 88 1.83 Mlig455_070157

Neo: -

Age: Up-Down-Up

 0.993 - - 0.993 - - - Mlig455_070157 {REF} {Length: 2611} {RNA1310_65373} {RNA815_37965}
93. MligTC455_48964 1805 37.6 Mlig455_032203, Mlig455_054201, Mlig455_060743

Neo: Int S/G2/M

Age: -

 HDGFL2 0.993 - - 0.993 - - -

Mlig455_032203 {REF} {Length: 3949} {TRANSSPLICED} {Pfam: Lens epithelium-derived growth factor (LEDGF) [PF11467.10, score=54.1]; PWWP domain [PF00855.19, score=35.7]} {Human: ENSG00000167674, HDGFL2, HDGF like 2, [RH, Score=109, Expect=5e-24]; ENSG00000166503, HDGFL3, HDGF like 3, [RH, Score=108, Expect=4e-26]; ENSG00000164985, PSIP1, PC4 and SFRS1 interacting protein 1, [RH, Score=106, Expect=2e-23]} {Mouse: ENSMUSG00000002833, Hdgfl2, HDGF like 2, [RH, Score=109, Expect=4e-24]; ENSMUSG00000025104, Hdgfl3, HDGF like 3, [RH, Score=107, Expect=4e-26]; ENSMUSG00000028484, Psip1, PC4 and SFRS1 interacting protein 1, [RH, Score=106, Expect=2e-23]} {Dmel: FBgn0039743, CG7946, [RH, Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_2842_0_3, dd_Smed_v6_2842_0_3, [RH, Score=144, Expect=4e-35]} {RNA1509_10931, RNA1509_22006} {RNA1310_2576.1, RNA1509_10931} {RNA1509_10931, RNA815_1028.1}

Mlig455_054201 {REF} {Length: 3958} {TRANSSPLICED} {Pfam: Lens epithelium-derived growth factor (LEDGF) [PF11467.10, score=54.1]; PWWP domain [PF00855.19, score=35.7]} {Human: ENSG00000167674, HDGFL2, HDGF like 2, [RH, Score=109, Expect=5e-24]; ENSG00000166503, HDGFL3, HDGF like 3, [RH, Score=108, Expect=3e-26]; ENSG00000164985, PSIP1, PC4 and SFRS1 interacting protein 1, [RH, Score=106, Expect=2e-23]} {Mouse: ENSMUSG00000002833, Hdgfl2, HDGF like 2, [RH, Score=109, Expect=3e-24]; ENSMUSG00000025104, Hdgfl3, HDGF like 3, [RH, Score=107, Expect=4e-26]; ENSMUSG00000028484, Psip1, PC4 and SFRS1 interacting protein 1, [RH, Score=106, Expect=2e-23]} {Dmel: FBgn0039743, CG7946, [RH, Score=53.1, Expect=7e-07]} {Smed: dd_Smed_v6_2842_0_3, dd_Smed_v6_2842_0_3, [RH, Score=144, Expect=4e-35]} {RNA1509_22006} {RNA1310_2576.1, RNA1509_22006} {RNA1509_22006, RNA815_1028.1}

Mlig455_060743 {REF} {Length: 3625} {TRANSSPLICED} {Pfam: Lens epithelium-derived growth factor (LEDGF) [PF11467.10, score=54.3]} {Mouse: ENSMUSG00000028484, Psip1, PC4 and SFRS1 interacting protein 1, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_2842_0_4, dd_Smed_v6_2842_0_4, [Score=84.0, Expect=2e-16]} {RNA1509_22006, RNA1509_42178} {RNA1310_2576.1, RNA1509_42178} {RNA1509_42178, RNA815_1028.1}
94. MligTC455_05557 49 1.02 Mlig455_054327

Neo: -

Age: -

Region-enriched R4: 4.473/0.00273

 0.992 - - 0.992 - - - Mlig455_054327 {REF} {Length: 519} {NoTransDecoderORF} {RNA1509_38197} {RNA1310_90831} {RNA815_43533}
95. MligTC455_13613 133 2.77 Mlig455_047175, Mlig455_048504

Neo: Germline

Age: Up-Down-Down

 0.992 - - 0.992 - - -

Mlig455_047175 {REF} {Length: 967} {RNA1310_43089} {RNA815_23666}

Mlig455_048504 {REF} {Length: 949} {RNA1310_43089} {RNA815_23666}
96. MligTC455_31839 175 3.65 Mlig455_004032, Mlig455_060430

Neo: -

Age: -

 0.992 - - 0.992 - - -

Mlig455_004032 {REF} {Length: 1233} {TRANSSPLICED} {RNA1509_21492} {RNA1310_1437} {RNA815_11827.1}

Mlig455_060430 {REF} {Length: 831} {RNA1509_19124} {RNA1310_1437} {RNA815_889}
97. MligTC455_35900 11 0.24 Mlig455_006270, Mlig455_061215

Neo: Germline

Age: -

 GLRA1, GLRA2 0.992 0.992 - - - - -

Mlig455_006270 {REF} {Length: 4313} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=56.3]} {Human: ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=74.7, Expect=1e-16]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=73.9, Expect=2e-16]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=73.6, Expect=2e-16]; ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=73.2, Expect=6e-17]; ENSG00000113327, GABRG2, gamma-aminobutyric acid type A receptor gamma2 subunit, [Score=72.0, Expect=7e-16]; ENSG00000145863, GABRA6, gamma-aminobutyric acid type A receptor alpha6 subunit, [Score=71.2, Expect=3e-16]} {Mouse: ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=74.3, Expect=1e-16]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=73.6, Expect=2e-16]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=72.8, Expect=2e-16]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=72.0, Expect=6e-16]; ENSMUSG00000020436, Gabrg2, gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2, [Score=72.0, Expect=5e-16]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [Score=79.0, Expect=1e-18]} {Celegans: WBGene00006784, unc-49, Ionotropic GABA receptor subunit UNC-49C, [Score=87.4, Expect=4e-23]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=67.4, Expect=1e-14]} {RNA1509_37141} {RNA1310_19618.1} {RNA815_7538}

Mlig455_061215 {REF} {Length: 584} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=97.4]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [Score=105, Expect=7e-28]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [Score=104, Expect=5e-26]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [Score=104, Expect=8e-26]; ENSG00000188828, GLRA4, glycine receptor alpha 4, [Score=103, Expect=1e-25]} {Mouse: ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [Score=104, Expect=7e-26]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [Score=103, Expect=7e-26]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [Score=103, Expect=8e-26]; ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [Score=102, Expect=2e-25]; ENSMUSG00000055078, Gabra5, gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5, [Score=99.4, Expect=3e-24]} {Dmel: FBgn0004244, Rdl, Resistant to dieldrin, [Score=117, Expect=2e-30]} {Celegans: WBGene00006784, unc-49, Ionotropic GABA receptor subunit UNC-49C, [Score=127, Expect=3e-37]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=94.7, Expect=4e-23]} {RNA1310_57606} {RNA815_48912}
98. MligTC455_39081 135 2.81 Mlig455_046917

Neo: Int S/G2/M

Age: -

Region-enriched R4: 4.814/0.00608

 MRE11 0.992 - - 0.992 - - - Mlig455_046917 {REF} {Length: 5274} {TRANSSPLICED} {Pfam: Mre11 DNA-binding presumed domain [PF04152.16, score=118.3]; Calcineurin-like phosphoesterase [PF00149.30, score=50.0]; Calcineurin-like phosphoesterase superfamily domain [PF12850.9, score=22.2]} {Human: ENSG00000020922, MRE11, MRE11 homolog, double strand break repair nuclease, [RH, Score=492, Expect=7e-165]} {Mouse: ENSMUSG00000031928, Mre11a, MRE11A homolog A, double strand break repair nuclease, [RH, Score=485, Expect=3e-162]} {Dmel: FBgn0020270, mre11, meiotic recombination 11, [RH, Score=362, Expect=8e-116]} {Celegans: WBGene00003405, mre-11, Double-strand break repair protein mre-11, [RH, Score=349, Expect=7e-110]} {Smed: dd_Smed_v6_4961_0_1, dd_Smed_v6_4961_0_1, [RH, Score=432, Expect=3e-143]} {RNA1509_23285, RNA1509_59039} {RNA1310_7622.1, RNA1509_23285, RNA1509_59039} {RNA1509_23285, RNA1509_59039, RNA815_13142}
99. MligTC455_42461 124 2.59 Mlig455_058734

Neo: -

Age: logFC(26M/2M)=0.352

 GAPVD1 0.992 - - 0.992 - - - Mlig455_058734 {REF} {Length: 5433} {TRANSSPLICED} {Pfam: Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=58.8]} {Human: ENSG00000165219, GAPVD1, GTPase activating protein and VPS9 domains 1, [Score=132, Expect=1e-30]} {Mouse: ENSMUSG00000026867, Gapvd1, GTPase activating protein and VPS9 domains 1, [Score=130, Expect=8e-30]} {Dmel: FBgn0030286, CG1657, [Score=90.9, Expect=5e-18]} {Celegans: WBGene00004377, rme-6, Receptor-mediated endocytosis protein 6, [Score=102, Expect=9e-22]} {Smed: dd_Smed_v6_6601_0_1, dd_Smed_v6_6601_0_1, [Score=80.9, Expect=3e-15]} {RNA1509_7178} {RNA1310_1202.1} {RNA815_477.1}
100. MligTC455_50933 280 5.83 Mlig455_011495

Neo: -

Age: Down-Down-Up

 0.992 - - 0.992 - - - Mlig455_011495 {REF} {Length: 3671} {TRANSSPLICED} {RNA1509_11429} {RNA1310_2886.1} {RNA815_8254}

There are 490 more genes with r >= 0.95  Show all


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