Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_06210 | 18 | 0.37 | Mlig455_019039 | Neo: - Age: - |
Mlig455_019039 {REF} {Length: 100} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_1441.2} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -5.968 | 0.974 | 1.00000 | 1.00000 | |
RegionR2 | 3.605 | 0.974 | 0.13325 | 0.45315 | |
RegionR3 | 1.399 | 0.974 | 0.64989 | 1.00000 | |
RegionR4 | -2.053 | 0.974 | 1.00000 | 1.00000 | |
RegionR5 | 2.196 | 0.974 | 0.81570 | 1.00000 | |
RegionR6 | 2.07 | 0.974 | 0.73653 | 1.00000 | |
RegionR7 | -0.818 | 0.974 | 1.00000 | 1.00000 | |
RegionR8 | -0.431 | 0.974 | 1.00000 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 5.257 | 0.974 | 0.99988 | 1.00000 | |
RegenerationR2 | -0.543 | 0.974 | 0.46619 | 0.85583 | |
RegenerationR3 | 1.825 | 0.974 | 0.77256 | 0.97244 | |
RegenerationR4 | 0.879 | 0.974 | 0.93798 | 1.00000 | |
RegenerationR5 | 0.803 | 0.974 | 0.93585 | 1.00000 | |
RegenerationR6 | -0.914 | 0.974 | 0.63390 | 0.88957 | |
RegenerationBL | 0.317 | 0.974 | 0.99963 | 1.00000 | |
RegenerationTP | 1.367 | 0.974 | 1.00000 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_06210 | 18 | 0.37 | Mlig455_019039 | Neo: - Age: - |
3 | 1.000 | 1.000 | - | - | 1.000 | - | Mlig455_019039 {REF} {Length: 100} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_1441.2} | |
2. | MligTC455_20475 | 85 | 1.78 | Mlig455_002468, Mlig455_045914 | Neo: Irradiation Age: Down-Up-Up Region-enriched R2: 11.940/0.00005 |
UNC45B | 2.579 | 0.875 | 0.743 | - | - | 0.961 | - | Mlig455_002468 {REF} {Length: 1884} {Human: ENSG00000141161, UNC45B, unc-45 myosin chaperone B, [Score=72.8, Expect=2e-15]} {Mouse: ENSMUSG00000018845, Unc45b, unc-45 myosin chaperone B, [Score=71.2, Expect=5e-15]} {Dmel: FBgn0010812, unc-45, uncoordinated 45, [Score=63.5, Expect=1e-12]} {Celegans: WBGene00006781, unc-45, UNC-45, [Score=57.4, Expect=2e-10]} {RNA1509_31395} {RNA1310_37524.1} {RNA815_26316} Mlig455_045914 {REF} {Length: 1402} {Human: ENSG00000141161, UNC45B, unc-45 myosin chaperone B, [Score=109, Expect=2e-27]} {Mouse: ENSMUSG00000018845, Unc45b, unc-45 myosin chaperone B, [Score=117, Expect=2e-30]} {Dmel: FBgn0010812, unc-45, uncoordinated 45, [Score=102, Expect=4e-25]} {Celegans: WBGene00006781, unc-45, UNC-45, [Score=99.4, Expect=2e-24]} {Smed: dd_Smed_v6_6344_0_1, dd_Smed_v6_6344_0_1, [Score=106, Expect=6e-27]} {RNA1310_29568} {RNA815_35563} |
3. | MligTC455_20451 | 333 | 6.94 | Mlig455_011920, Mlig455_011930 | Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 3.177/0.00070 |
2.519 | 0.788 | 0.775 | - | - | 0.956 | - | Mlig455_011920 {REF} {Length: 1628} {TRANSSPLICED} {RNA1509_60017} {RNA1310_31646} {RNA815_14776.2} Mlig455_011930 {REF} {Length: 624} {NoTransDecoderORF} {RNA1509_60017} {RNA1310_59589} {RNA815_14776.2} |
|
4. | MligTC455_44370 | 175 | 3.64 | Mlig455_028913 | Neo: Irradiation Age: logFC(26M/2M)=0.325 Region-enriched R2: 6.377/0.02108 |
2.474 | 0.791 | 0.725 | - | - | 0.958 | - | Mlig455_028913 {REF} {Length: 2146} {RNA1509_25325, RNA1509_33675} {RNA1310_28229.1, RNA1509_33675} {RNA1509_33675, RNA815_13844} | |
5. | MligTC455_15387 | 936 | 19.51 | Mlig455_009726 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.329 Region-enriched R5: 4.267/0.00000 |
CDC42BPA | 2.392 | 0.712 | 0.729 | - | - | 0.951 | - | Mlig455_009726 {REF} {Length: 2686} {Pfam: Protein kinase domain [PF00069.27, score=84.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.6]} {Human: ENSG00000143776, CDC42BPA, CDC42 binding protein kinase alpha, [Score=78.2, Expect=3e-14]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=78.2, Expect=3e-14]; ENSG00000104936, DMPK, DM1 protein kinase, [Score=77.0, Expect=4e-14]; ENSG00000122966, CIT, citron rho-interacting serine/threonine kinase, [Score=77.0, Expect=3e-14]; ENSG00000171219, CDC42BPG, CDC42 binding protein kinase gamma, [Score=75.5, Expect=2e-13]; ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=75.1, Expect=2e-13]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=75.1, Expect=2e-13]; ENSG00000198752, CDC42BPB, CDC42 binding protein kinase beta, [Score=75.1, Expect=3e-13]; ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=74.3, Expect=4e-13]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000026490, Cdc42bpa, CDC42 binding protein kinase alpha, [Score=79.0, Expect=1e-14]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=78.2, Expect=2e-14]; ENSMUSG00000030409, Dmpk, dystrophia myotonica-protein kinase, [Score=76.6, Expect=4e-14]; ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=75.9, Expect=8e-14]; ENSMUSG00000029516, Cit, citron, [Score=75.5, Expect=1e-13]; ENSMUSG00000024290, Rock1, Rho-associated coiled-coil containing protein kinase 1, [Score=75.5, Expect=8e-14]; ENSMUSG00000024769, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [Score=75.5, Expect=2e-13]; ENSMUSG00000107268, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [Score=75.5, Expect=2e-13]; ENSMUSG00000021279, Cdc42bpb, CDC42 binding protein kinase beta, [Score=75.1, Expect=2e-13]} {Dmel: FBgn0023081, gek, genghis khan, [Score=75.9, Expect=7e-14]} {Celegans: WBGene00006437, mrck-1, Serine/threonine-protein kinase mrck-1, [Score=77.4, Expect=2e-14]} {Smed: dd_Smed_v6_4316_0_1, dd_Smed_v6_4316_0_1, [Score=79.0, Expect=3e-15]} {RNA1509_6923} {RNA1310_7715.1, RNA1509_6923} {RNA1509_6923, RNA815_12455} |
6. | MligTC455_07219 | 19 | 0.4 | Mlig455_056088 | Neo: - Age: - |
1.787 | 0.836 | - | - | - | 0.951 | - | Mlig455_056088 {REF} {Length: 775} {RNA1310_53469} {RNA815_28822} | |
7. | MligTC455_06755 | 253 | 5.27 | Mlig455_036493 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.471 Region-enriched R5: 5.244/0.00000 |
1.717 | 0.767 | - | - | - | 0.950 | - | Mlig455_036493 {REF} {Length: 1009} {RNA1509_4727} {RNA1310_37261} {RNA815_59788} | |
8. | MligTC455_26869 | 1216 | 25.33 | Mlig455_008292, Mlig455_040658, Mlig455_062060 | Neo: Irradiation Age: Down-Up-Up, logFC(26M/2M)=0.447 Region-enriched R5: 2.624/0.00000 |
1.714 | 0.754 | - | - | - | 0.960 | - | Mlig455_008292 {REF} {Length: 2124} {TRANSSPLICED} {RNA1509_18957, RNA1509_37791} {RNA1310_20612.1, RNA1509_37791} {RNA1509_37791, RNA815_26913} Mlig455_040658 {REF} {Length: 2312} {TRANSSPLICED} {RNA1509_18957} {RNA1310_20612.1} {RNA815_26913} Mlig455_062060 {REF} {Length: 2680} {TRANSSPLICED} {RNA1509_18957, RNA1509_32011} {RNA1310_20612.1, RNA1509_32011} {RNA1509_32011, RNA815_26913} |
|
9. | MligTC455_30098 | 250 | 5.22 | Mlig455_054738 | Neo: Irradiation Age: Up-Down-Up Region-enriched R5: 3.015/0.00001 |
FGFR3 | 1.712 | - | 0.755 | - | - | 0.957 | - | Mlig455_054738 {REF} {Length: 4229} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=260.4]; Protein kinase domain [PF00069.27, score=122.4]; Immunoglobulin domain [PF13927.8, score=33.1]; Immunoglobulin domain [PF13895.8, score=29.1]; Immunoglobulin domain [PF00047.27, score=25.5]; Immunoglobulin domain [PF18452.3, score=25.0]; Immunoglobulin I-set domain [PF07679.18, score=23.4]; Immunoglobulin V-set domain [PF07686.19, score=20.1]} {Human: ENSG00000068078, FGFR3, fibroblast growth factor receptor 3, [RH, Score=230, Expect=4e-63]; ENSG00000077782, FGFR1, fibroblast growth factor receptor 1, [RH, Score=222, Expect=4e-60]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [RH, Score=220, Expect=1e-59]} {Mouse: ENSMUSG00000054252, Fgfr3, fibroblast growth factor receptor 3, [RH, Score=227, Expect=4e-62]; ENSMUSG00000031565, Fgfr1, fibroblast growth factor receptor 1, [RH, Score=221, Expect=1e-60]; ENSMUSG00000005320, Fgfr4, fibroblast growth factor receptor 4, [RH, Score=219, Expect=1e-59]; ENSMUSG00000030849, Fgfr2, fibroblast growth factor receptor 2, [RH, Score=216, Expect=7e-60]} {Dmel: FBgn0010389, htl, heartless, [RH, Score=222, Expect=4e-61]} {Celegans: WBGene00001184, egl-15, Myoblast growth factor receptor egl-15, [RH, Score=231, Expect=9e-63]} {Smed: dd_Smed_v6_11024_0_1, dd_Smed_v6_11024_0_1, [RH, Score=219, Expect=1e-59]} {RNA1509_21574} {RNA1310_2106.2, RNA1509_21574} {RNA1509_21574, RNA815_2648} |
10. | MligTC455_13090 | 15 | 0.3 | Mlig455_036250 | Neo: Irradiation Age: logFC(26M/2M)=0.713 |
0.98 | - | - | - | - | 0.980 | - | Mlig455_036250 {REF} {Length: 967} {Pfam: Biotin-protein ligase, N terminal [PF09825.11, score=133.9]; Beta-galactosidase trimerisation domain [PF08532.12, score=21.3]} {Smed: dd_Smed_v6_17148_0_1, dd_Smed_v6_17148_0_1, [Score=84.7, Expect=2e-19]} {RNA1509_20585} {RNA1310_37022} {RNA815_27808} | |
11. | MligTC455_30334 | 98 | 2.04 | Mlig455_049981 | Neo: - Age: logFC(26M/2M)=0.403 Region-enriched R6: 4.680/0.00020 |
TUBB3 | 0.976 | - | - | - | - | 0.976 | - | Mlig455_049981 {REF} {Length: 1954} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.4]; Tubulin C-terminal domain [PF03953.19, score=143.8]; Misato Segment II tubulin-like domain [PF10644.11, score=21.0]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=832, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=815, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=832, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [RH, Score=815, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=833, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=846, Expect=0.0]} {Smed: dd_Smed_v6_83_0_1, dd_Smed_v6_83_0_1, [Score=855, Expect=0.0]} {RNA1509_5590} {RNA1310_15130.1} {RNA815_1610.1} |
12. | MligTC455_22239 | 10 | 0.21 | Mlig455_008513 | Neo: - Age: Down-Down-Up |
PSMF1 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_008513 {REF} {Length: 3406} {TRANSSPLICED} {tRNA: Val(CAC),pseudo, score=20.9} {Pfam: PI31 proteasome regulator N-terminal [PF11566.10, score=24.5]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=21.4]} {Human: ENSG00000125818, PSMF1, proteasome inhibitor subunit 1, [RH, Score=83.6, Expect=7e-18]} {Mouse: ENSMUSG00000032869, Psmf1, proteasome (prosome, macropain) inhibitor subunit 1, [RH, Score=76.3, Expect=2e-15]} {Dmel: FBgn0033669, PI31, Proteasome inhibitor 31 kDa, [Score=50.4, Expect=7e-07]} {RNA1509_6467} {RNA1310_17656} {RNA815_17675.1} |
13. | MligTC455_41242 | 7 | 0.14 | Mlig455_061076, Mlig455_061122 | Neo: - Age: - |
0.972 | - | - | - | - | 0.972 | - | Mlig455_061076 {REF} {Length: 899} {NoTransDecoderORF} {RNA1509_6985} {RNA1310_26239} {RNA815_2288} Mlig455_061122 {REF} {Length: 835} {NoTransDecoderORF} {RNA1509_6985} {RNA1310_26239} {RNA815_2288} |
|
14. | MligTC455_13225 | 69 | 1.44 | Mlig455_005809 | Neo: - Age: - Region-enriched R5: 2.506/0.01949 |
0.971 | - | - | - | - | 0.971 | - | Mlig455_005809 {REF} {Length: 1922} {RNA1509_50589} {RNA1310_17944} {RNA815_7628} | |
15. | MligTC455_12323 | 13 | 0.26 | Mlig455_036716 | Neo: - Age: - |
0.965 | - | - | - | - | 0.965 | - | Mlig455_036716 {REF} {Length: 655} {NoTransDecoderORF} {RNA1509_53170} {RNA1310_116425} {RNA815_52253} | |
16. | MligTC455_03252 | 21 | 0.44 | Mlig455_048683 | Neo: - Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_048683 {REF} {Length: 419} {NoTransDecoderORF} {RNA1509_34103} {RNA1310_15969} {RNA815_36583.1} | |
17. | MligTC455_21465 | 8 | 0.17 | Mlig455_000239 | Neo: - Age: Up-Down-Down |
0.964 | - | - | - | - | 0.964 | - | Mlig455_000239 {REF} {Length: 2548} {RNA1509_42866} {RNA1310_51973} {RNA815_26113} | |
18. | MligTC455_30333 | 108 | 2.25 | Mlig455_011610 | Neo: - Age: logFC(26M/2M)=-0.563 Region-enriched R6: 4.582/0.00016 |
TUBB3 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_011610 {REF} {Length: 1809} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.4]; Tubulin C-terminal domain [PF03953.19, score=143.8]; Misato Segment II tubulin-like domain [PF10644.11, score=21.0]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=830, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=813, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=830, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [RH, Score=814, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=832, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=845, Expect=0.0]} {Smed: dd_Smed_v6_83_0_1, dd_Smed_v6_83_0_1, [Score=853, Expect=0.0]} {RNA1509_5590} {RNA1310_15130.1} {RNA815_1610.1} |
19. | MligTC455_04864 | 19 | 0.4 | Mlig455_060598, Mlig455_060640 | Neo: - Age: - |
0.958 | - | - | - | - | 0.958 | - | Mlig455_060598 {REF} {Length: 2344} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=25.7]} {RNA1509_52816} {RNA1310_148644} {RNA815_1980.1} Mlig455_060640 {REF} {Length: 2471} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=26.1]} {RNA1509_52816} {RNA1310_148644} {RNA815_1980.1} |
|
20. | MligTC455_38128 | 20 | 0.43 | Mlig455_044200 | Neo: - Age: Down-Up-Down |
MOK | 0.958 | - | - | - | - | 0.958 | - | Mlig455_044200 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=225.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=100.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.0]; Kinase-like [PF14531.8, score=19.5]; RIO1 family [PF01163.24, score=18.9]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=18.7]} {Human: ENSG00000080823, MOK, MOK protein kinase, [RH, Score=390, Expect=8e-132]} {Mouse: ENSMUSG00000056458, Mok, MOK protein kinase, [RH, Score=393, Expect=5e-133]} {Dmel: FBgn0259712, CG42366, [Score=258, Expect=2e-77]} {Celegans: WBGene00001121, dyf-5, Serine/threonine-protein kinase dyf-5, [Score=234, Expect=1e-70]} {Smed: dd_Smed_v6_15542_0_1, dd_Smed_v6_15542_0_1, [RH, Score=415, Expect=5e-141]} {RNA1509_23114} {RNA1310_15433.1} {RNA815_13706} |
21. | MligTC455_05243 | 28 | 0.58 | Mlig455_003304 | Neo: - Age: Down-Up-Up |
MX2 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_003304 {REF} {Length: 2994} {Pfam: Dynamin central region [PF01031.22, score=164.7]; Dynamin family [PF00350.25, score=133.5]; Dynamin GTPase effector domain [PF02212.20, score=47.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.1]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [RH, Score=352, Expect=4e-111]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=342, Expect=5e-108]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [RH, Score=350, Expect=2e-111]} {Dmel: FBgn0003392, shi, shibire, [Score=182, Expect=3e-48]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=168, Expect=1e-43]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [Score=179, Expect=1e-47]} {RNA1509_29560} {RNA1310_8317.2} {RNA815_3104.1} |
22. | MligTC455_25713 | 20 | 0.42 | Mlig455_007373 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_007373 {REF} {Length: 1626} {Pfam: Homeodomain [PF00046.31, score=20.7]} {RNA1509_10691} {RNA1310_18777} {RNA815_15127} | |
23. | MligTC455_26881 | 27 | 0.56 | Mlig455_061967 | Neo: - Age: Down-Up-Down |
0.954 | - | - | - | - | 0.954 | - | Mlig455_061967 {REF} {Length: 1948} {RNA1509_2150} {RNA1310_11022.1} {RNA815_1043.1} | |
24. | MligTC455_44819 | 17 | 0.36 | Mlig455_001006 | Neo: - Age: Up-Down-Up |
0.952 | - | - | - | - | 0.952 | - | Mlig455_001006 {REF} {Length: 2627} {RNA1310_13211.1} {RNA815_63372} | |
25. | MligTC455_04473 | 7 | 0.15 | Mlig455_005528 | Neo: - Age: - |
0.95 | - | - | - | - | 0.950 | - | Mlig455_005528 {REF} {Length: 259} {NoTransDecoderORF} {RNA815_57876} | |
26. | MligTC455_24144 | 123 | 2.55 | Mlig455_069389 | Neo: - Age: - Region-specific R4: 5.241 Region-enriched R4: 4.115/0.00015 |
0.95 | - | - | - | - | 0.950 | - | Mlig455_069389 {REF} {Length: 1744} {RNA1509_35501} {RNA1310_30027.1} {RNA815_13361} | |
27. | MligTC455_34392 | 70 | 1.46 | Mlig455_017963 | Neo: Irradiation Age: - Region-enriched R5: 3.920/0.00338 |
NYNRIN | 0.95 | 0.950 | - | - | - | - | - | Mlig455_017963 {REF} {Length: 6112} {Pfam: Integrase zinc binding domain [PF17921.3, score=60.4]; Integrase core domain [PF00665.28, score=55.8]; Integrase core domain [PF13683.8, score=23.8]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=58.9, Expect=1e-08]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=57.4, Expect=2e-08]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=104, Expect=1e-24]} {RNA1509_14638} {RNA1310_2007} {RNA815_7723.1} |