M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_07219

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_07219 19 0.40 Mlig455_056088

Neo: -

Age: -

 Mlig455_056088 {REF} {Length: 775} {RNA1310_53469} {RNA815_28822}

Cumulative graph for MligTC455_07219

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.424 0.918 0.99978 1.00000
RegionR2 0.744 0.918 0.99993 1.00000
RegionR3 2.523 0.918 0.21678 0.75822
RegionR4 -3.916 0.918 0.99975 1.00000
RegionR5 1.779 0.918 0.40384 0.76172
RegionR6 3.831 0.918 0.18688 0.75337
RegionR7 -0.864 0.918 1.00000 1.00000
RegionR8 -0.673 0.918 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.183 0.918 1.00000 1.00000
RegenerationR2 0.704 0.918 0.99998 1.00000
RegenerationR3 -1.843 0.918 0.75650 0.96652
RegenerationR4 2.112 0.918 0.99985 1.00000
RegenerationR5 1.571 0.918 0.37229 0.78165
RegenerationR6 -3.117 0.918 0.71644 0.93334
RegenerationBL -0.446 0.918 0.99961 1.00000
RegenerationTP 0.971 0.918 0.99994 1.00000


Genes with expression patterns similar to MligTC455_07219

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_07219 19 0.4 Mlig455_056088

Neo: -

Age: -

 3 1.000 1.000 - - 1.000 - Mlig455_056088 {REF} {Length: 775} {RNA1310_53469} {RNA815_28822}
2. MligTC455_38353 94 1.97 Mlig455_058045

Neo: Irradiation

Age: logFC(26M/2M)=0.732

 1.861 0.901 - - - 0.960 - Mlig455_058045 {REF} {Length: 1616} {RNA1509_37368} {RNA1310_24656} {RNA815_16237}
3. MligTC455_04864 19 0.4 Mlig455_060598, Mlig455_060640

Neo: -

Age: -

 1.857 0.862 - - - 0.995 -

Mlig455_060598 {REF} {Length: 2344} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=25.7]} {RNA1509_52816} {RNA1310_148644} {RNA815_1980.1}

Mlig455_060640 {REF} {Length: 2471} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=26.1]} {RNA1509_52816} {RNA1310_148644} {RNA815_1980.1}
4. MligTC455_45608 267 5.55 Mlig455_060976

Neo: -

Age: -

Region-enriched R5: 2.756/0.00167

 1.855 0.878 - - - 0.977 - Mlig455_060976 {REF} {Length: 590} {NoTransDecoderORF} {RNA1509_25665} {RNA1310_10034.1, RNA1509_25665} {RNA1509_25665, RNA815_10059.2}
5. MligTC455_25572 647 13.49 Mlig455_009589

Neo: -

Age: logFC(26M/2M)=0.957

Region-enriched R5: 3.807/0.00002

 1.844 0.952 - - - 0.892 - Mlig455_009589 {REF} {Length: 860} {Pfam: PAN domain [PF14295.8, score=25.5]} {RNA1509_4342} {RNA1310_65774.1} {RNA815_28801.1}
6. MligTC455_15387 936 19.51 Mlig455_009726

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.329

Region-enriched R5: 4.267/0.00000
Region-enriched R6: 2.607/0.01858

 CDC42BPA 1.831 0.864 - - - 0.967 - Mlig455_009726 {REF} {Length: 2686} {Pfam: Protein kinase domain [PF00069.27, score=84.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=47.6]} {Human: ENSG00000143776, CDC42BPA, CDC42 binding protein kinase alpha, [Score=78.2, Expect=3e-14]; ENSG00000177189, RPS6KA3, ribosomal protein S6 kinase A3, [Score=78.2, Expect=3e-14]; ENSG00000104936, DMPK, DM1 protein kinase, [Score=77.0, Expect=4e-14]; ENSG00000122966, CIT, citron rho-interacting serine/threonine kinase, [Score=77.0, Expect=3e-14]; ENSG00000171219, CDC42BPG, CDC42 binding protein kinase gamma, [Score=75.5, Expect=2e-13]; ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=75.1, Expect=2e-13]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=75.1, Expect=2e-13]; ENSG00000198752, CDC42BPB, CDC42 binding protein kinase beta, [Score=75.1, Expect=3e-13]; ENSG00000071242, RPS6KA2, ribosomal protein S6 kinase A2, [Score=74.3, Expect=4e-13]; ENSG00000125388, GRK4, G protein-coupled receptor kinase 4, [Score=74.3, Expect=2e-13]} {Mouse: ENSMUSG00000026490, Cdc42bpa, CDC42 binding protein kinase alpha, [Score=79.0, Expect=1e-14]; ENSMUSG00000031309, Rps6ka3, ribosomal protein S6 kinase polypeptide 3, [Score=78.2, Expect=2e-14]; ENSMUSG00000030409, Dmpk, dystrophia myotonica-protein kinase, [Score=76.6, Expect=4e-14]; ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=75.9, Expect=8e-14]; ENSMUSG00000029516, Cit, citron, [Score=75.5, Expect=1e-13]; ENSMUSG00000024290, Rock1, Rho-associated coiled-coil containing protein kinase 1, [Score=75.5, Expect=8e-14]; ENSMUSG00000024769, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [Score=75.5, Expect=2e-13]; ENSMUSG00000107268, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [Score=75.5, Expect=2e-13]; ENSMUSG00000021279, Cdc42bpb, CDC42 binding protein kinase beta, [Score=75.1, Expect=2e-13]} {Dmel: FBgn0023081, gek, genghis khan, [Score=75.9, Expect=7e-14]} {Celegans: WBGene00006437, mrck-1, Serine/threonine-protein kinase mrck-1, [Score=77.4, Expect=2e-14]} {Smed: dd_Smed_v6_4316_0_1, dd_Smed_v6_4316_0_1, [Score=79.0, Expect=3e-15]} {RNA1509_6923} {RNA1310_7715.1, RNA1509_6923} {RNA1509_6923, RNA815_12455}
7. MligTC455_26869 1216 25.33 Mlig455_008292, Mlig455_040658, Mlig455_062060

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.447

Region-enriched R5: 2.624/0.00000

 1.826 0.862 - - - 0.964 -

Mlig455_008292 {REF} {Length: 2124} {TRANSSPLICED} {RNA1509_18957, RNA1509_37791} {RNA1310_20612.1, RNA1509_37791} {RNA1509_37791, RNA815_26913}

Mlig455_040658 {REF} {Length: 2312} {TRANSSPLICED} {RNA1509_18957} {RNA1310_20612.1} {RNA815_26913}

Mlig455_062060 {REF} {Length: 2680} {TRANSSPLICED} {RNA1509_18957, RNA1509_32011} {RNA1310_20612.1, RNA1509_32011} {RNA1509_32011, RNA815_26913}
8. MligTC455_21245 53 1.1 Mlig455_007282

Neo: Irradiation

Age: -

Region-enriched R5: 4.319/0.03591

 1.802 0.850 - - - 0.952 - Mlig455_007282 {REF} {Length: 2015} {Pfam: SAP domain [PF02037.29, score=32.1]; Phage integrase family [PF00589.24, score=28.7]} {RNA1310_3424.1} {RNA815_32478}
9. MligTC455_30098 250 5.22 Mlig455_054738

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R5: 3.015/0.00001

 FGFR3 1.796 0.838 - - - 0.958 - Mlig455_054738 {REF} {Length: 4229} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=260.4]; Protein kinase domain [PF00069.27, score=122.4]; Immunoglobulin domain [PF13927.8, score=33.1]; Immunoglobulin domain [PF13895.8, score=29.1]; Immunoglobulin domain [PF00047.27, score=25.5]; Immunoglobulin domain [PF18452.3, score=25.0]; Immunoglobulin I-set domain [PF07679.18, score=23.4]; Immunoglobulin V-set domain [PF07686.19, score=20.1]} {Human: ENSG00000068078, FGFR3, fibroblast growth factor receptor 3, [RH, Score=230, Expect=4e-63]; ENSG00000077782, FGFR1, fibroblast growth factor receptor 1, [RH, Score=222, Expect=4e-60]; ENSG00000160867, FGFR4, fibroblast growth factor receptor 4, [RH, Score=220, Expect=1e-59]} {Mouse: ENSMUSG00000054252, Fgfr3, fibroblast growth factor receptor 3, [RH, Score=227, Expect=4e-62]; ENSMUSG00000031565, Fgfr1, fibroblast growth factor receptor 1, [RH, Score=221, Expect=1e-60]; ENSMUSG00000005320, Fgfr4, fibroblast growth factor receptor 4, [RH, Score=219, Expect=1e-59]; ENSMUSG00000030849, Fgfr2, fibroblast growth factor receptor 2, [RH, Score=216, Expect=7e-60]} {Dmel: FBgn0010389, htl, heartless, [RH, Score=222, Expect=4e-61]} {Celegans: WBGene00001184, egl-15, Myoblast growth factor receptor egl-15, [RH, Score=231, Expect=9e-63]} {Smed: dd_Smed_v6_11024_0_1, dd_Smed_v6_11024_0_1, [RH, Score=219, Expect=1e-59]} {RNA1509_21574} {RNA1310_2106.2, RNA1509_21574} {RNA1509_21574, RNA815_2648}
10. MligTC455_06210 18 0.37 Mlig455_019039

Neo: -

Age: -

 1.787 0.836 - - - 0.951 - Mlig455_019039 {REF} {Length: 100} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_1441.2}
11. MligTC455_08813 5283 110.05 Mlig455_059878

Neo: Irradiation

Age: -

Region-enriched R5: 3.198/0.00003
Region-enriched R2: 2.956/0.02667

 ZFP36L2 1.779 0.805 - - - 0.974 - Mlig455_059878 {REF} {Length: 2842} {Pfam: Zinc finger C-x8-C-x5-C-x3-H type (and similar) [PF00642.26, score=38.0]; Zinc finger domain [PF18345.3, score=23.5]} {Human: ENSG00000152518, ZFP36L2, ZFP36 ring finger protein like 2, [Score=70.1, Expect=4e-12]; ENSG00000185650, ZFP36L1, ZFP36 ring finger protein like 1, [Score=67.4, Expect=1e-11]} {Mouse: ENSMUSG00000021127, Zfp36l1, zinc finger protein 36, C3H type-like 1, [Score=67.8, Expect=6e-12]} {Dmel: FBgn0011837, Tis11, Tis11 zinc finger protein, [Score=63.2, Expect=2e-10]} {Celegans: WBGene00003228, mex-1, MEX-1; Muscle EXcess, [Score=59.7, Expect=2e-09]} {RNA1509_2832, RNA1509_38907, RNA1509_4274, RNA1509_5547, RNA1509_901} {RNA1310_23038, RNA1509_2832, RNA1509_38907, RNA1509_4274, RNA1509_5547, RNA1509_901} {RNA1509_2832, RNA1509_38907, RNA1509_4274, RNA1509_5547, RNA1509_901, RNA815_7955.2}
12. MligTC455_24370 3170 66.04 Mlig455_001601, Mlig455_068601

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=1.048

Region-enriched R5: 3.766/0.00000

 1.764 0.809 - - - 0.955 -

Mlig455_001601 {REF} {Length: 4436} {RNA1509_622} {RNA1310_17391} {RNA815_5272.1}

Mlig455_068601 {REF} {Length: 1960} {TRANSSPLICED} {RNA1509_51863, RNA1509_622} {RNA1310_17391, RNA1509_51863} {RNA1509_51863, RNA815_9863}
13. MligTC455_41225 160 3.34 Mlig455_000551, Mlig455_030349

Neo: Irradiation

Age: -

Region-enriched R5: 4.613/0.00164

 1.764 0.812 - - - 0.952 -

Mlig455_000551 {REF} {Length: 1060} {RNA1310_35374} {RNA815_30088}

Mlig455_030349 {REF} {Length: 1035} {RNA1310_35374} {RNA815_30088}
14. MligTC455_44273 11418 237.87 Mlig455_030693, Mlig455_031024

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R2: 4.028/0.00635
Region-enriched R5: 3.738/0.00003

 POLR2A 1.758 0.790 - - - 0.968 -

Mlig455_030693 {REF} {Length: 1801} {Human: ENSG00000284832, POLR2A, RNA polymerase II subunit A, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000005198, Polr2a, polymerase (RNA) II (DNA directed) polypeptide A, [Score=61.2, Expect=1e-09]} {Celegans: WBGene00006820, unc-89, Muscle M-line assembly protein unc-89, [Score=67.0, Expect=1e-11]} {Smed: dd_Smed_v6_1965_0_1, dd_Smed_v6_1965_0_1, [Score=66.6, Expect=1e-11]} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.4}

Mlig455_031024 {REF} {Length: 1675} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.4}
15. MligTC455_44272 5757 119.94 Mlig455_030617

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R2: 3.907/0.00436
Region-enriched R5: 3.803/0.00000
Region-enriched R6: 2.387/0.04850

 1.755 0.788 - - - 0.967 - Mlig455_030617 {REF} {Length: 1626} {RNA1509_4744} {RNA1310_59309.1} {RNA815_12566.1}
16. MligTC455_24369 2070 43.12 Mlig455_043029

Neo: -

Age: Down-Up-Down

Region-enriched R5: 3.687/0.00000

 1.753 0.798 - - - 0.955 - Mlig455_043029 {REF} {Length: 5809} {RNA1509_622} {RNA1310_48164} {RNA815_5272.1}
17. MligTC455_46442 2236 46.59 Mlig455_032167, Mlig455_067635

Neo: -

Age: logFC(26M/2M)=0.460

Region-enriched R5: 1.316/0.00197

 AGA 1.752 0.787 - - - 0.965 -

Mlig455_032167 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: Asparaginase [PF01112.20, score=222.2]} {Human: ENSG00000038002, AGA, aspartylglucosaminidase, [Score=232, Expect=9e-73]} {Mouse: ENSMUSG00000031521, Aga, aspartylglucosaminidase, [Score=218, Expect=1e-67]} {Dmel: FBgn0033431, CG1827, [Score=236, Expect=5e-74]} {Celegans: WBGene00019867, R04B3.2, Putative N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase Glycosylasparaginase alpha chain Glycosylasparaginase beta chain, [Score=187, Expect=5e-56]} {Smed: dd_Smed_v6_3326_0_2, dd_Smed_v6_3326_0_2, [Score=290, Expect=6e-96]} {RNA1509_8661} {RNA1310_20724.2} {RNA815_22731}

Mlig455_067635 {REF} {Length: 1278} {TRANSSPLICED} {Pfam: Asparaginase [PF01112.20, score=236.2]} {Human: ENSG00000038002, AGA, aspartylglucosaminidase, [RH, Score=246, Expect=1e-78]} {Mouse: ENSMUSG00000031521, Aga, aspartylglucosaminidase, [RH, Score=232, Expect=2e-73]} {Dmel: FBgn0033431, CG1827, [RH, Score=259, Expect=2e-83]} {Celegans: WBGene00019867, R04B3.2, Putative N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase Glycosylasparaginase alpha chain Glycosylasparaginase beta chain, [RH, Score=204, Expect=8e-63]} {Smed: dd_Smed_v6_3326_0_2, dd_Smed_v6_3326_0_2, [RH, Score=310, Expect=3e-104]} {RNA1509_52155, RNA1509_8661} {RNA1310_20724.2, RNA1509_52155, RNA1509_8661} {RNA1509_52155, RNA1509_8661, RNA815_22731}
18. MligTC455_15419 31 0.65 Mlig455_041511

Neo: Irradiation

Age: Down-Up-Up

 1.729 0.969 - - - 0.760 - Mlig455_041511 {REF} {Length: 1060} {RNA1509_50501, RNA1509_52389} {RNA1310_37100, RNA1509_50501, RNA1509_52389} {RNA1509_50501, RNA1509_52389, RNA815_34228.2}
19. MligTC455_06755 253 5.27 Mlig455_036493

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.471

Region-enriched R5: 5.244/0.00000
Region-enriched R6: 4.012/0.00287

 1.721 0.764 - - - 0.957 - Mlig455_036493 {REF} {Length: 1009} {RNA1509_4727} {RNA1310_37261} {RNA815_59788}
20. MligTC455_16013 376 7.82 Mlig455_002828

Neo: Irradiation

Age: logFC(26M/2M)=0.279

Region-enriched R5: 3.139/0.00000

 CCDC102B 1.721 0.757 - - - 0.964 - Mlig455_002828 {REF} {Length: 3370} {TRANSSPLICED} {Human: ENSG00000150636, CCDC102B, coiled-coil domain containing 102B, [Score=78.2, Expect=6e-15]} {Mouse: ENSMUSG00000063605, Ccdc102a, coiled-coil domain containing 102A, [Score=75.5, Expect=1e-13]} {Dmel: FBgn0051638, CG31638, [Score=89.7, Expect=3e-18]} {Celegans: WBGene00018763, F53F10.1, [Score=75.9, Expect=4e-15]} {Smed: dd_Smed_v6_13699_0_1, dd_Smed_v6_13699_0_1, [RH, Score=82.0, Expect=1e-16]} {RNA1509_8054} {RNA1310_7176} {RNA815_2237}
21. MligTC455_12430 1324 27.59 Mlig455_000502, Mlig455_024840

Neo: Irradiation

Age: logFC(26M/2M)=0.716

Region-enriched R5: 3.500/0.00000
Region-enriched R6: 2.404/0.00002

 ANKRD6 1.708 0.738 - - - 0.970 -

Mlig455_000502 {REF} {Length: 2742} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=144.3]; Ankyrin repeats (many copies) [PF13857.8, score=127.1]; Ankyrin repeat [PF00023.32, score=108.2]; Ankyrin repeats (many copies) [PF13637.8, score=107.3]; Ankyrin repeat [PF13606.8, score=78.8]; GET complex subunit GET2 [PF08690.12, score=19.3]} {Human: ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=182, Expect=4e-48]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=180, Expect=1e-47]} {Dmel: FBgn0086898, dgo, diego, [Score=136, Expect=8e-33]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=125, Expect=4e-29]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=231, Expect=5e-67]} {RNA1509_54903, RNA1509_5896} {RNA1310_7062.1, RNA1509_54903} {RNA1509_54903, RNA815_9964}

Mlig455_024840 {REF} {Length: 6621} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=144.2]; Ankyrin repeats (many copies) [PF13857.8, score=127.2]; Ankyrin repeat [PF00023.32, score=114.4]; Ankyrin repeats (many copies) [PF13637.8, score=104.0]; Ankyrin repeat [PF13606.8, score=81.8]; GET complex subunit GET2 [PF08690.12, score=19.3]} {Human: ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=178, Expect=5e-47]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=176, Expect=1e-46]} {Dmel: FBgn0086898, dgo, diego, [Score=133, Expect=8e-32]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=127, Expect=1e-29]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=236, Expect=9e-69]} {RNA1509_5896} {RNA1310_7062.1, RNA1509_5896} {RNA1509_5896, RNA815_9964}
22. MligTC455_25714 297 6.19 Mlig455_007481

Neo: Irradiation

Age: Down-Up-Up

Region-enriched R5: 3.830/0.00000

 RAX 1.694 0.742 - - - 0.952 - Mlig455_007481 {REF} {Length: 1875} {Pfam: Homeodomain [PF00046.31, score=57.8]; Anti-sigma-K factor rskA [PF10099.11, score=19.4]} {Human: ENSG00000134438, RAX, retina and anterior neural fold homeobox, [Score=59.3, Expect=1e-09]; ENSG00000109851, DBX1, developing brain homeobox 1, [Score=58.2, Expect=3e-09]} {Mouse: ENSMUSG00000024518, Rax, retina and anterior neural fold homeobox, [Score=60.5, Expect=4e-10]} {Dmel: FBgn0005558, ey, eyeless, [Score=58.5, Expect=2e-09]} {Celegans: WBGene00001096, dsc-1, Homeobox protein dsc-1, [Score=57.8, Expect=2e-09]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [Score=62.4, Expect=5e-11]} {RNA1509_10691} {RNA1310_18777} {RNA815_15127}
23. MligTC455_30333 108 2.25 Mlig455_011610

Neo: -

Age: logFC(26M/2M)=-0.563

Region-enriched R6: 4.582/0.00016
Region-enriched R3: 3.974/0.00312

 TUBB3 1.692 - 0.703 - - 0.989 - Mlig455_011610 {REF} {Length: 1809} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.4]; Tubulin C-terminal domain [PF03953.19, score=143.8]; Misato Segment II tubulin-like domain [PF10644.11, score=21.0]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=830, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=813, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=830, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [RH, Score=814, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=832, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=845, Expect=0.0]} {Smed: dd_Smed_v6_83_0_1, dd_Smed_v6_83_0_1, [Score=853, Expect=0.0]} {RNA1509_5590} {RNA1310_15130.1} {RNA815_1610.1}
24. MligTC455_30334 98 2.04 Mlig455_049981

Neo: -

Age: logFC(26M/2M)=0.403

Region-enriched R6: 4.680/0.00020
Region-enriched R3: 3.922/0.00768

 TUBB3 1.689 - 0.701 - - 0.988 - Mlig455_049981 {REF} {Length: 1954} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=236.4]; Tubulin C-terminal domain [PF03953.19, score=143.8]; Misato Segment II tubulin-like domain [PF10644.11, score=21.0]} {Human: ENSG00000258947, TUBB3, tubulin beta 3 class III, [RH, Score=832, Expect=0.0]; ENSG00000176014, TUBB6, tubulin beta 6 class V, [RH, Score=815, Expect=0.0]} {Mouse: ENSMUSG00000062380, Tubb3, tubulin, beta 3 class III, [RH, Score=832, Expect=0.0]; ENSMUSG00000001473, Tubb6, tubulin, beta 6 class V, [RH, Score=815, Expect=0.0]} {Dmel: FBgn0003889, betaTub85D, beta-Tubulin at 85D, [RH, Score=833, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=846, Expect=0.0]} {Smed: dd_Smed_v6_83_0_1, dd_Smed_v6_83_0_1, [Score=855, Expect=0.0]} {RNA1509_5590} {RNA1310_15130.1} {RNA815_1610.1}
25. MligTC455_17933 26 0.54 Mlig455_006081, Mlig455_068032

Neo: -

Age: -

 0.999 - - - - 0.999 -

Mlig455_006081 {REF} {Length: 1840} {TRANSSPLICED} {Pfam: Thioesterase-like superfamily [PF13622.8, score=77.8]; Acyl-CoA thioesterase [PF02551.17, score=25.0]} {Celegans: WBGene00017781, F25E2.3, [Score=75.1, Expect=6e-15]} {RNA1509_31100} {RNA1310_25213} {RNA815_49205}

Mlig455_068032 {REF} {Length: 1653} {NoTransDecoderORF} {RNA1509_31100} {RNA1310_25213} {RNA815_22533}
26. MligTC455_04473 7 0.15 Mlig455_005528

Neo: -

Age: -

 0.987 - - - - 0.987 - Mlig455_005528 {REF} {Length: 259} {NoTransDecoderORF} {RNA815_57876}
27. MligTC455_13853 28 0.57 Mlig455_043964, Mlig455_044044

Neo: -

Age: -

 YTHDC1 0.987 - - - - 0.987 -

Mlig455_043964 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: YT521-B-like domain [PF04146.17, score=140.7]} {Human: ENSG00000275272, YTHDC1, YTH domain containing 1, [RH, Score=214, Expect=9e-61]; ENSG00000083896, YTHDC1, YTH domain containing 1, [RH, Score=214, Expect=9e-61]} {Mouse: ENSMUSG00000035851, Ythdc1, YTH domain containing 1, [RH, Score=216, Expect=7e-63]} {Dmel: FBgn0027616, YT521-B, [RH, Score=206, Expect=7e-58]} {Smed: dd_Smed_v6_3491_0_1, dd_Smed_v6_3491_0_1, [RH, Score=230, Expect=4e-70]} {RNA1509_38337} {RNA1310_14878, RNA1509_38337} {RNA1509_38337, RNA815_14051}

Mlig455_044044 {REF} {Length: 1903} {TRANSSPLICED} {Pfam: YT521-B-like domain [PF04146.17, score=140.7]} {Human: ENSG00000275272, YTHDC1, YTH domain containing 1, [RH, Score=214, Expect=9e-61]; ENSG00000083896, YTHDC1, YTH domain containing 1, [RH, Score=214, Expect=9e-61]} {Mouse: ENSMUSG00000035851, Ythdc1, YTH domain containing 1, [RH, Score=216, Expect=7e-63]} {Dmel: FBgn0027616, YT521-B, [RH, Score=206, Expect=7e-58]} {Smed: dd_Smed_v6_3491_0_1, dd_Smed_v6_3491_0_1, [RH, Score=230, Expect=4e-70]} {RNA1509_17852, RNA1509_29578, RNA1509_38337, RNA1509_58381} {RNA1310_14878, RNA1509_17852, RNA1509_29578, RNA1509_58381} {RNA1509_17852, RNA1509_29578, RNA1509_58381, RNA815_14051}
28. MligTC455_38128 20 0.43 Mlig455_044200

Neo: -

Age: Down-Up-Down

 MOK 0.987 - - - - 0.987 - Mlig455_044200 {REF} {Length: 1829} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=225.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=100.8]; Lipopolysaccharide kinase (Kdo/WaaP) family [PF06293.16, score=24.0]; Kinase-like [PF14531.8, score=19.5]; RIO1 family [PF01163.24, score=18.9]; Kinetochore Sim4 complex subunit FTA2 [PF13095.8, score=18.7]} {Human: ENSG00000080823, MOK, MOK protein kinase, [RH, Score=390, Expect=8e-132]} {Mouse: ENSMUSG00000056458, Mok, MOK protein kinase, [RH, Score=393, Expect=5e-133]} {Dmel: FBgn0259712, CG42366, [Score=258, Expect=2e-77]} {Celegans: WBGene00001121, dyf-5, Serine/threonine-protein kinase dyf-5, [Score=234, Expect=1e-70]} {Smed: dd_Smed_v6_15542_0_1, dd_Smed_v6_15542_0_1, [RH, Score=415, Expect=5e-141]} {RNA1509_23114} {RNA1310_15433.1} {RNA815_13706}
29. MligTC455_18929 215 4.48 Mlig455_006110

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.114

Region-enriched R4: 3.627/0.00001

 ACOT8 0.985 - - - - 0.985 - Mlig455_006110 {REF} {Length: 2536} {TRANSSPLICED} {Pfam: Thioesterase-like superfamily [PF13622.8, score=172.5]; Acyl-CoA thioesterase [PF02551.17, score=58.0]} {Human: ENSG00000101473, ACOT8, acyl-CoA thioesterase 8, [Score=132, Expect=1e-35]} {Mouse: ENSMUSG00000017307, Acot8, acyl-CoA thioesterase 8, [Score=141, Expect=5e-39]} {Celegans: WBGene00017781, F25E2.3, [RH, Score=130, Expect=3e-35]} {Smed: dd_Smed_v6_10206_0_1, dd_Smed_v6_10206_0_1, [RH, Score=124, Expect=4e-33]} {RNA1509_18155, RNA1509_38008, RNA1509_52910} {RNA1310_30891, RNA1509_18155, RNA1509_38008, RNA1509_52910} {RNA1509_18155, RNA1509_38008, RNA1509_52910, RNA815_14445}
30. MligTC455_51270 44 0.91 Mlig455_069173

Neo: -

Age: -

 CELSR1 0.985 - - - - 0.985 - Mlig455_069173 {REF} {Length: 3003} {Pfam: 7 transmembrane receptor (Secretin family) [PF00002.26, score=62.4]; Slime mold cyclic AMP receptor [PF05462.13, score=22.2]; Frizzled/Smoothened family membrane region [PF01534.19, score=20.4]} {Human: ENSG00000075275, CELSR1, cadherin EGF LAG seven-pass G-type receptor 1, [Score=52.8, Expect=2e-06]} {Dmel: FBgn0035132, mthl10, methuselah-like 10, [Score=65.5, Expect=8e-11]} {Smed: dd_Smed_v6_10981_0_1, dd_Smed_v6_10981_0_1, [Score=89.7, Expect=1e-18]} {RNA1310_15556} {RNA815_44855}
31. MligTC455_24242 2 0.04 Mlig455_002340, Mlig455_019764

Neo: -

Age: Up-Down-Up

 0.982 - - - - 0.982 -

Mlig455_002340 {REF} {Length: 1883} {Pfam: Immunoglobulin domain [PF13927.8, score=51.6]; Immunoglobulin domain [PF00047.27, score=37.2]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=35.8]; Immunoglobulin I-set domain [PF07679.18, score=34.0]; Immunoglobulin V-set domain [PF07686.19, score=25.6]} {Dmel: FBgn0024189, sns, sticks and stones, [Score=70.1, Expect=5e-12]} {Celegans: WBGene00006365, syg-1, Synaptogenesis protein syg-1, [Score=48.5, Expect=1e-05]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=85.9, Expect=3e-17]} {RNA1310_95342} {RNA815_21286}

Mlig455_019764 {REF} {Length: 2027} {Pfam: Immunoglobulin domain [PF13927.8, score=51.1]; Immunoglobulin domain [PF00047.27, score=38.1]; Immunoglobulin I-set domain [PF07679.18, score=31.5]; Immunoglobulin V-set domain [PF07686.19, score=26.6]} {Dmel: FBgn0024189, sns, sticks and stones, [Score=67.8, Expect=2e-11]} {Celegans: WBGene00018026, F35A5.4, [Score=55.8, Expect=7e-08]} {Smed: dd_Smed_v6_16056_0_1, dd_Smed_v6_16056_0_1, [Score=88.2, Expect=8e-18]} {RNA1310_95342} {RNA815_21286}
32. MligTC455_25328 29 0.6 Mlig455_059750

Neo: -

Age: -

 0.978 - - - - 0.978 - Mlig455_059750 {REF} {Length: 1286} {RNA1509_59014} {RNA1310_69465.1} {RNA815_43258}
33. MligTC455_26881 27 0.56 Mlig455_061967

Neo: -

Age: Down-Up-Down

 0.978 - - - - 0.978 - Mlig455_061967 {REF} {Length: 1948} {RNA1509_2150} {RNA1310_11022.1} {RNA815_1043.1}
34. MligTC455_05595 580 12.08 Mlig455_030824, Mlig455_047793

Neo: -

Age: logFC(26M/2M)=-0.522

Region-enriched R6: 6.229/0.00011
Region-enriched R5: 5.574/0.00017
Region-enriched R7: 4.629/0.00453

Regeneration-upregulated R4: 6.392

Regeneration-enriched R4: 6.392

 0.975 0.975 - - - - -

Mlig455_030824 {REF} {Length: 828} {TRANSSPLICED} {RNA1509_59107} {RNA1310_48270.1} {RNA815_35331}

Mlig455_047793 {REF} {Length: 830} {TRANSSPLICED} {RNA1509_59107} {RNA1310_48270.1, RNA1509_59107} {RNA1509_59107, RNA815_35331}
35. MligTC455_10628 24 0.5 Mlig455_001722

Neo: -

Age: Up-Down-Down

Region-enriched R5: 4.713/0.00168

 0.975 - - - - 0.975 - Mlig455_001722 {REF} {Length: 3131} {RNA1509_31449} {RNA1310_6253} {RNA815_13646}
36. MligTC455_05243 28 0.58 Mlig455_003304

Neo: -

Age: Down-Up-Up

 MX2 0.973 - - - - 0.973 - Mlig455_003304 {REF} {Length: 2994} {Pfam: Dynamin central region [PF01031.22, score=164.7]; Dynamin family [PF00350.25, score=133.5]; Dynamin GTPase effector domain [PF02212.20, score=47.2]; 50S ribosome-binding GTPase [PF01926.25, score=21.1]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [RH, Score=352, Expect=4e-111]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [RH, Score=342, Expect=5e-108]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [RH, Score=350, Expect=2e-111]} {Dmel: FBgn0003392, shi, shibire, [Score=182, Expect=3e-48]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=168, Expect=1e-43]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [Score=179, Expect=1e-47]} {RNA1509_29560} {RNA1310_8317.2} {RNA815_3104.1}
37. MligTC455_38352 22 0.47 Mlig455_058090

Neo: -

Age: -

Region-enriched R5: 5.072/0.00672

 0.971 0.971 - - - - - Mlig455_058090 {REF} {Length: 1498} {RNA1509_37368} {RNA1310_24656} {RNA815_16237}
38. MligTC455_50745 105 2.18 Mlig455_002802

Neo: -

Age: -

 TYW5 0.971 - - - - 0.971 - Mlig455_002802 {REF} {Length: 1917} {TRANSSPLICED} {Pfam: Cupin-like domain [PF13621.8, score=114.1]; Cupin superfamily protein [PF08007.14, score=18.9]} {Human: ENSG00000162971, TYW5, tRNA-yW synthesizing protein 5, [RH, Score=252, Expect=1e-81]} {Mouse: ENSMUSG00000048495, Tyw5, tRNA-yW synthesizing protein 5, [RH, Score=243, Expect=2e-78]} {Dmel: FBgn0035166, CG13902, [Score=68.6, Expect=2e-12]} {Smed: dd_Smed_v6_8202_0_1, dd_Smed_v6_8202_0_1, [RH, Score=243, Expect=7e-79]} {RNA1509_22421} {RNA1310_30547} {RNA815_8750}
39. MligTC455_14133 34 0.7 Mlig455_049257

Neo: Irradiation

Age: -

Region-enriched R6: 7.088/0.00083
Region-enriched R5: 6.140/0.00035

 GLS 0.97 0.970 - - - - - Mlig455_049257 {REF} {Length: 2534} {Pfam: Glutaminase [PF04960.17, score=249.2]; Ankyrin repeats (3 copies) [PF12796.9, score=32.6]; Ankyrin repeats (many copies) [PF13637.8, score=31.0]; Ankyrin repeats (many copies) [PF13857.8, score=28.8]; EF-hand domain [PF17959.3, score=22.7]} {Human: ENSG00000115419, GLS, glutaminase, [Score=374, Expect=2e-120]; ENSG00000135423, GLS2, glutaminase 2, [Score=360, Expect=5e-116]} {Mouse: ENSMUSG00000026103, Gls, glutaminase, [Score=372, Expect=7e-120]; ENSMUSG00000044005, Gls2, glutaminase 2 (liver, mitochondrial), [Score=368, Expect=4e-119]} {Dmel: FBgn0261625, GLS, Glutaminase, [Score=379, Expect=8e-123]} {Celegans: WBGene00007480, glna-1, GLutamiNAse, [Score=383, Expect=6e-123]} {Smed: dd_Smed_v6_15097_0_1, dd_Smed_v6_15097_0_1, [Score=298, Expect=1e-94]} {RNA1509_45807} {RNA1310_38679, RNA1509_45807}
40. MligTC455_14663 41 0.84 Mlig455_015553

Neo: -

Age: -

 0.967 0.967 - - - - - Mlig455_015553 {REF} {Length: 2076} {RNA1509_60096} {RNA1310_37961} {RNA815_24102}
41. MligTC455_45762 5 0.09 Mlig455_046801

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_046801 {REF} {Length: 969} {NoTransDecoderORF} {RNA1310_147977}
42. MligTC455_06466 61 1.27 Mlig455_023837

Neo: -

Age: -

 RNF44 0.964 - - - - 0.964 - Mlig455_023837 {REF} {Length: 2513} {Pfam: Ring finger domain [PF13639.8, score=43.6]; RING-H2 zinc finger domain [PF12678.9, score=31.8]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=29.0]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=27.6]; Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=26.2]; Prokaryotic RING finger family 1 [PF14446.8, score=25.7]; zinc-RING finger domain [PF14634.8, score=25.5]; RING-like zinc finger [PF17123.7, score=24.7]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.3]} {Human: ENSG00000146083, RNF44, ring finger protein 44, [Score=51.2, Expect=2e-07]; ENSG00000137075, RNF38, ring finger protein 38, [Score=50.4, Expect=5e-07]; ENSG00000183763, TRAIP, TRAF interacting protein, [Score=50.1, Expect=6e-07]; ENSG00000163162, RNF149, ring finger protein 149, [Score=49.7, Expect=8e-07]; ENSG00000170153, RNF150, ring finger protein 150, [Score=49.7, Expect=7e-07]} {Mouse: ENSMUSG00000035696, Rnf38, ring finger protein 38, [Score=51.2, Expect=2e-07]; ENSMUSG00000032586, Traip, TRAF-interacting protein, [Score=50.1, Expect=4e-07]; ENSMUSG00000034928, Rnf44, ring finger protein 44, [Score=50.1, Expect=4e-07]; ENSMUSG00000047747, Rnf150, ring finger protein 150, [Score=49.7, Expect=7e-07]; ENSMUSG00000048234, Rnf149, ring finger protein 149, [Score=49.7, Expect=6e-07]} {Dmel: FBgn0037705, mura, murashka, [Score=50.1, Expect=4e-07]} {Celegans: WBGene00017144, brap-2, BRCA1-associated protein homolog 2, [Score=45.1, Expect=1e-05]} {Smed: dd_Smed_v6_7396_0_1, dd_Smed_v6_7396_0_1, [Score=48.5, Expect=7e-07]} {RNA1509_59869} {RNA1310_85762}
43. MligTC455_44370 175 3.64 Mlig455_028913

Neo: Irradiation

Age: logFC(26M/2M)=0.325

Region-enriched R2: 6.377/0.02108
Region-enriched R5: 5.881/0.00000
Region-enriched R6: 5.513/0.00058

 0.964 - - - - 0.964 - Mlig455_028913 {REF} {Length: 2146} {RNA1509_25325, RNA1509_33675} {RNA1310_28229.1, RNA1509_33675} {RNA1509_33675, RNA815_13844}
44. MligTC455_03252 21 0.44 Mlig455_048683

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_048683 {REF} {Length: 419} {NoTransDecoderORF} {RNA1509_34103} {RNA1310_15969} {RNA815_36583.1}
45. MligTC455_25713 20 0.42 Mlig455_007373

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_007373 {REF} {Length: 1626} {Pfam: Homeodomain [PF00046.31, score=20.7]} {RNA1509_10691} {RNA1310_18777} {RNA815_15127}
46. MligTC455_00281 6 0.12 Mlig455_025100, Mlig455_026839

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_025100 {REF} {Length: 765} {Smed: dd_Smed_v6_28750_0_1, dd_Smed_v6_28750_0_1, [Score=45.8, Expect=6e-07]} {RNA1310_63874} {RNA815_45300}

Mlig455_026839 {REF} {Length: 1105} {RNA1310_63874} {RNA815_45300}
47. MligTC455_44819 17 0.36 Mlig455_001006

Neo: -

Age: Up-Down-Up

 0.961 - - - - 0.961 - Mlig455_001006 {REF} {Length: 2627} {RNA1310_13211.1} {RNA815_63372}
48. MligTC455_13225 69 1.44 Mlig455_005809

Neo: -

Age: -

Region-enriched R5: 2.506/0.01949

 0.957 - - - - 0.957 - Mlig455_005809 {REF} {Length: 1922} {RNA1509_50589} {RNA1310_17944} {RNA815_7628}
49. MligTC455_25715 449 9.36 Mlig455_007383

Neo: Irradiation

Age: logFC(26M/2M)=0.325

Region-enriched R5: 4.105/0.00000
Region-enriched R6: 2.872/0.02831

 RAX 0.957 - - - - 0.957 - Mlig455_007383 {REF} {Length: 1823} {Pfam: Homeodomain [PF00046.31, score=57.8]} {Human: ENSG00000134438, RAX, retina and anterior neural fold homeobox, [Score=59.7, Expect=1e-09]; ENSG00000109851, DBX1, developing brain homeobox 1, [Score=59.3, Expect=1e-09]} {Mouse: ENSMUSG00000024518, Rax, retina and anterior neural fold homeobox, [Score=61.2, Expect=2e-10]} {Dmel: FBgn0005558, ey, eyeless, [Score=58.9, Expect=1e-09]} {Celegans: WBGene00001096, dsc-1, Homeobox protein dsc-1, [Score=58.5, Expect=9e-10]} {Smed: dd_Smed_v6_22163_0_1, dd_Smed_v6_22163_0_1, [Score=59.7, Expect=3e-10]} {RNA1509_10691} {RNA1310_17778.1, RNA1509_10691} {RNA1509_10691, RNA815_3080.1}
50. MligTC455_07912 8 0.16 Mlig455_012891

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_012891 {REF} {Length: 778} {NoTransDecoderORF} {RNA1509_50843} {RNA1310_95196} {RNA815_52267}
51. MligTC455_09946 9 0.19 Mlig455_068386

Neo: -

Age: -

 ECE2 0.954 - - - - 0.954 - Mlig455_068386 {REF} {Length: 3943} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=127.5]; Peptidase family M13 [PF01431.23, score=111.7]; Peptidase family M13 [PF05649.15, score=23.9]} {Human: ENSG00000145194, ECE2, endothelin converting enzyme 2, [Score=84.0, Expect=1e-15]; ENSG00000284917, EEF1AKMT4-ECE2, EEF1AKMT4-ECE2 readthrough, [Score=83.6, Expect=1e-15]; ENSG00000276615, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=83.2, Expect=1e-15]; ENSG00000197993, KEL, Kell metallo-endopeptidase (Kell blood group), [Score=83.2, Expect=1e-15]} {Mouse: ENSMUSG00000029866, Kel, Kell blood group, [Score=91.3, Expect=3e-18]; ENSMUSG00000027820, Mme, membrane metallo endopeptidase, [Score=88.2, Expect=3e-17]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=96.3, Expect=7e-20]} {Celegans: WBGene00013926, nep-1, Neprilysin-1, [Score=87.0, Expect=3e-17]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=85.1, Expect=1e-16]} {RNA1310_10797} {RNA815_14357}
52. MligTC455_03889 198 4.12 Mlig455_011519

Neo: Int S/G2/M

Age: -

Region-enriched R5: 2.193/0.00342

 0.952 - - - - 0.952 - Mlig455_011519 {REF} {Length: 1539} {RNA1509_29174} {RNA1310_34623} {RNA815_15967}
53. MligTC455_25717 5795 120.73 Mlig455_000126

Neo: Irradiation

Age: -

Region-enriched R5: 3.425/0.00003

 0.95 - - - - 0.950 - Mlig455_000126 {REF} {Length: 2044} {Celegans: WBGene00009362, F33E2.6, [Score=50.4, Expect=2e-06]} {RNA1509_12717, RNA1509_2202, RNA1509_5260, RNA1509_975} {RNA1310_19387, RNA1509_12717, RNA1509_2202, RNA1509_5260} {RNA1509_12717, RNA1509_2202, RNA1509_5260, RNA815_16539}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA