TomoSeq data search

Data search

Results for MligTC455_06403

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_06403	4	0.08	Mlig455_040739	Neo: - Age: -		Mlig455_040739 {REF} {Length: 673} {NoTransDecoderORF} {RNA1310_131206} {RNA815_43319}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_06403

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_06403

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_06403	4	0.08	Mlig455_040739	Neo: - Age: -		1	-	1.000	-	-	-	-	Mlig455_040739 {REF} {Length: 673} {NoTransDecoderORF} {RNA1310_131206} {RNA815_43319}
2.	MligTC455_06237	4	0.08	Mlig455_005721	Neo: - Age: -		0.999	-	0.999	-	-	-	-	Mlig455_005721 {REF} {Length: 420} {NoTransDecoderORF} {RNA1509_32965} {RNA1310_13566} {RNA815_2169}
3.	MligTC455_19992	84	1.75	Mlig455_015924	Neo: Germline Age: Up-Down-Down Regeneration-enriched R4: 7.007	KLHL10	0.994	-	0.994	-	-	-	-	Mlig455_015924 {REF} {Length: 2626} {Pfam: Kelch motif [PF01344.27, score=49.3]; BTB And C-terminal Kelch [PF07707.17, score=40.6]; Kelch motif [PF07646.17, score=25.3]; Kelch motif [PF13964.8, score=18.8]} {Human: ENSG00000161594, KLHL10, kelch like family member 10, [Score=68.6, Expect=2e-11]; ENSG00000114796, KLHL24, kelch like family member 24, [Score=66.6, Expect=6e-11]} {Mouse: ENSMUSG00000044938, Klhl31, kelch-like 31, [Score=82.4, Expect=6e-16]} {Dmel: FBgn0001301, kel, kelch, [Score=63.2, Expect=5e-10]} {Smed: dd_Smed_v6_1751_0_1, dd_Smed_v6_1751_0_1, [Score=53.9, Expect=2e-07]} {RNA1509_22536} {RNA1310_7097} {RNA815_20881}
4.	MligTC455_03826	6	0.12	Mlig455_059571	Neo: - Age: -		0.993	-	0.993	-	-	-	-	Mlig455_059571 {REF} {Length: 341} {NoTransDecoderORF}
5.	MligTC455_34186	3	0.07	Mlig455_026774	Neo: - Age: -		0.991	-	0.991	-	-	-	-	Mlig455_026774 {REF} {Length: 1879} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.7]} {RNA1509_33402} {RNA1310_4029} {RNA815_19773}
6.	MligTC455_20834	4	0.09	Mlig455_063684	Neo: - Age: -		0.98	-	0.980	-	-	-	-	Mlig455_063684 {REF} {Length: 1209} {Pfam: THAP domain [PF05485.14, score=43.8]} {RNA1509_48033} {RNA1310_58376} {RNA815_51419}
7.	MligTC455_47321	11	0.23	Mlig455_053680	Neo: - Age: -		0.98	-	0.980	-	-	-	-	Mlig455_053680 {REF} {Length: 522} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_83324}
8.	MligTC455_03186	6	0.12	Mlig455_047264, Mlig455_047317	Neo: - Age: -		0.976	-	0.976	-	-	-	-	Mlig455_047264 {REF} {Length: 2313} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=39.5]; Mitochondrial inner membrane protein [PF09731.11, score=21.7]; Enhancer of polycomb-like [PF10513.11, score=20.9]} {RNA1509_27943} {RNA1310_17912.2} {RNA815_23339} Mlig455_047317 {REF} {Length: 3723} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=38.5]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.7]} {RNA1509_27943} {RNA1310_17912.2, RNA1509_27943} {RNA1509_27943, RNA815_23339}
9.	MligTC455_08785	9	0.2	Mlig455_067653	Neo: - Age: -		0.975	-	0.975	-	-	-	-	Mlig455_067653 {REF} {Length: 1107} {RNA1310_91815} {RNA815_10183.3}
10.	MligTC455_24651	4	0.08	Mlig455_051474	Neo: - Age: -	NYNRIN	0.975	-	0.975	-	-	-	-	Mlig455_051474 {REF} {Length: 3215} {Pfam: Integrase zinc binding domain [PF17921.3, score=56.9]; Integrase core domain [PF00665.28, score=47.9]; H2C2 zinc finger [PF09337.12, score=19.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=66.2, Expect=6e-11]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=67.8, Expect=1e-11]} {RNA1509_35604} {RNA1310_27473} {RNA815_26012}
11.	MligTC455_21433	44	0.92	Mlig455_016479	Neo: Germline Age: - Region-enriched R4: 3.381/0.02270		0.972	-	0.972	-	-	-	-	Mlig455_016479 {REF} {Length: 1912} {RNA1509_59114} {RNA1310_21929.1} {RNA815_18147}
12.	MligTC455_36012	18	0.38	Mlig455_002402, Mlig455_057634	Neo: - Age: -		0.969	-	0.969	-	-	-	-	Mlig455_002402 {REF} {Length: 1022} {RNA1509_35444} {RNA1310_65842} {RNA815_52332} Mlig455_057634 {REF} {Length: 2686} {RNA1509_18844} {RNA1310_65842} {RNA815_52332}
13.	MligTC455_49009	7	0.15	Mlig455_022948	Neo: - Age: -		0.966	-	0.966	-	-	-	-	Mlig455_022948 {REF} {Length: 970} {NoTransDecoderORF} {RNA1509_12083} {RNA1310_107943} {RNA815_4177.1}
14.	MligTC455_05344	31	0.64	Mlig455_034283, Mlig455_060101	Neo: - Age: -	PIF1	0.965	-	0.965	-	-	-	-	Mlig455_034283 {REF} {Length: 906} {Pfam: PIF1-like helicase [PF05970.16, score=96.0]; UvrD-like helicase C-terminal domain [PF13538.8, score=30.1]; Helicase [PF02689.16, score=19.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=82.4, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=81.3, Expect=4e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=58.5, Expect=1e-09]} {Celegans: WBGene00021577, Y46B2A.2, [Score=139, Expect=2e-37]} {Smed: dd_Smed_v6_19520_0_6, dd_Smed_v6_19520_0_6, [Score=74.7, Expect=2e-17]} {RNA1310_72478} Mlig455_060101 {REF} {Length: 2472} {Pfam: PIF1-like helicase [PF05970.16, score=341.4]; AAA domain [PF13604.8, score=51.8]; UvrD-like helicase C-terminal domain [PF13538.8, score=27.1]; AAA domain [PF13245.8, score=21.4]; Helicase [PF02689.16, score=17.1]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=128, Expect=4e-30]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=123, Expect=1e-28]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=111, Expect=5e-25]} {Celegans: WBGene00019136, F59H6.5, [Score=301, Expect=2e-87]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=114, Expect=3e-26]} {RNA1310_72478}
15.	MligTC455_11678	29	0.6	Mlig455_003165	Neo: - Age: - Region-enriched R7: 5.398/0.01168		0.964	-	0.964	-	-	-	-	Mlig455_003165 {REF} {Length: 1487} {RNA1509_45511} {RNA1310_27553} {RNA815_23907.2}
16.	MligTC455_12273	7	0.15	Mlig455_020187	Neo: - Age: -		0.964	-	0.964	-	-	-	-	Mlig455_020187 {REF} {Length: 836} {Pfam: Uteroglobin family [PF01099.19, score=20.9]} {RNA1310_78326.1} {RNA815_36022}
17.	MligTC455_07133	15	0.31	Mlig455_045503	Neo: - Age: -		0.959	-	0.959	-	-	-	-	Mlig455_045503 {REF} {Length: 1418} {RNA1310_14234} {RNA815_30147}
18.	MligTC455_02534	4	0.08	Mlig455_062249	Neo: - Age: -		0.958	-	0.958	-	-	-	-	Mlig455_062249 {REF} {Length: 1521} {NoTransDecoderORF} {RNA1509_4161} {RNA1310_65030} {RNA815_853}
19.	MligTC455_22776	28	0.59	Mlig455_001677	Neo: - Age: -	PRKAA2	0.958	-	0.958	-	-	-	-	Mlig455_001677 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=35.5]; Kinase-like [PF14531.8, score=27.0]; ABC1 atypical kinase-like domain [PF03109.18, score=25.8]; RIO1 family [PF01163.24, score=21.7]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=560, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=555, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=535, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=531, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=505, Expect=1e-174]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=551, Expect=0.0]} {RNA1509_12822, RNA1509_58504} {RNA1310_12328.1, RNA1509_12822, RNA1509_58504} {RNA1509_12822, RNA1509_58504, RNA815_3277.1}
20.	MligTC455_16486	23	0.47	Mlig455_046446	Neo: Germline Age: -		0.956	-	0.956	-	-	-	-	Mlig455_046446 {REF} {Length: 569} {NoTransDecoderORF}
21.	MligTC455_03825	12	0.25	Mlig455_057358	Neo: - Age: Up-Down-Up		0.952	-	0.952	-	-	-	-	Mlig455_057358 {REF} {Length: 1276} {RNA1310_49208} {RNA815_40627}
22.	MligTC455_21370	41	0.86	Mlig455_016208, Mlig455_050599, Mlig455_062001, Mlig455_069812	Neo: Int S/G2/M Age: -		0.951	-	0.951	-	-	-	-	Mlig455_016208 {REF} {Length: 331} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_104800} {RNA815_57892} Mlig455_050599 {REF} {Length: 378} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_104800} {RNA815_57892} Mlig455_062001 {REF} {Length: 1164} {RNA1509_54683} {RNA1310_22137} {RNA815_57892} Mlig455_069812 {REF} {Length: 179} {NoTransDecoderORF} {RNA1509_54683} {RNA1310_104800} {RNA815_57892}