Data search


search
Exact
Search

Results for MligTC455_22776

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_22776 28 0.59 Mlig455_001677

Neo: -

Age: -

PRKAA2 Mlig455_001677 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=35.5]; Kinase-like [PF14531.8, score=27.0]; ABC1 atypical kinase-like domain [PF03109.18, score=25.8]; RIO1 family [PF01163.24, score=21.7]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=560, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=555, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=535, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=531, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=505, Expect=1e-174]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=551, Expect=0.0]} {RNA1509_12822, RNA1509_58504} {RNA1310_12328.1, RNA1509_12822, RNA1509_58504} {RNA1509_12822, RNA1509_58504, RNA815_3277.1}

Cumulative graph for MligTC455_22776

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.032 0.975 0.99995 1.00000
RegionR2 0.603 0.975 1.00000 1.00000
RegionR3 1.467 0.975 0.32362 0.86155
RegionR4 0.766 0.975 0.93734 1.00000
RegionR5 0.167 0.975 0.81525 1.00000
RegionR6 1.247 0.975 0.37359 0.95448
RegionR7 -1.075 0.975 0.99988 1.00000
RegionR8 -1.144 0.975 0.99994 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 3.535 0.975 0.99987 1.00000
RegenerationR2 2.762 0.975 0.10426 0.50896
RegenerationR3 2.097 0.975 0.19203 0.62728
RegenerationR4 1.612 0.975 0.34686 0.77730
RegenerationR5 3.801 0.975 0.08230 0.44455
RegenerationR6 4.058 0.975 0.08506 0.36507
RegenerationBL 4.561 0.975 0.06301 0.29163
RegenerationTP 4.966 0.975 0.11678 0.52287


Genes with expression patterns similar to MligTC455_22776

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_22776 28 0.59 Mlig455_001677

Neo: -

Age: -

PRKAA2 4 1.000 1.000 - - 1.000 1.000 Mlig455_001677 {REF} {Length: 3012} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=255.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=140.8]; Adenylate sensor of SNF1-like protein kinase [PF16579.7, score=35.5]; Kinase-like [PF14531.8, score=27.0]; ABC1 atypical kinase-like domain [PF03109.18, score=25.8]; RIO1 family [PF01163.24, score=21.7]} {Human: ENSG00000162409, PRKAA2, protein kinase AMP-activated catalytic subunit alpha 2, [Score=560, Expect=0.0]; ENSG00000132356, PRKAA1, protein kinase AMP-activated catalytic subunit alpha 1, [Score=542, Expect=0.0]} {Mouse: ENSMUSG00000028518, Prkaa2, protein kinase, AMP-activated, alpha 2 catalytic subunit, [Score=555, Expect=0.0]; ENSMUSG00000050697, Prkaa1, protein kinase, AMP-activated, alpha 1 catalytic subunit, [Score=535, Expect=0.0]} {Dmel: FBgn0023169, AMPKalpha, AMP-activated protein kinase alpha subunit, [Score=531, Expect=0.0]} {Celegans: WBGene00020142, aak-2, 5'-AMP-activated protein kinase catalytic subunit alpha-2, [Score=505, Expect=1e-174]} {Smed: dd_Smed_v6_2538_0_1, dd_Smed_v6_2538_0_1, [Score=551, Expect=0.0]} {RNA1509_12822, RNA1509_58504} {RNA1310_12328.1, RNA1509_12822, RNA1509_58504} {RNA1509_12822, RNA1509_58504, RNA815_3277.1}
2. MligTC455_21657 84 1.76 Mlig455_048610

Neo: -

Age: -

LMO1 1.702 - - - - 0.991 0.711 Mlig455_048610 {REF} {Length: 2071} {Pfam: LIM domain [PF00412.24, score=90.0]} {Human: ENSG00000166407, LMO1, LIM domain only 1, [RH, Score=186, Expect=1e-60]; ENSG00000048540, LMO3, LIM domain only 3, [RH, Score=183, Expect=2e-59]} {Mouse: ENSMUSG00000036111, Lmo1, LIM domain only 1, [RH, Score=183, Expect=1e-59]; ENSMUSG00000030226, Lmo3, LIM domain only 3, [RH, Score=183, Expect=1e-59]} {Dmel: FBgn0265598, Bx, Beadex, [RH, Score=198, Expect=1e-62]} {Celegans: WBGene00002987, lim-4, LIM domain family; Putative transcription factor LIM-4, [Score=79.3, Expect=7e-18]} {Smed: dd_Smed_v6_17422_0_1, dd_Smed_v6_17422_0_1, [RH, Score=140, Expect=6e-42]} {RNA1310_56294} {RNA815_40845}
3. MligTC455_03708 11 0.22 Mlig455_010701

Neo: -

Age: -

0.987 - 0.987 - - - - Mlig455_010701 {REF} {Length: 479} {RNA1310_1931.2}
4. MligTC455_22318 95 1.97 Mlig455_010919

Neo: -

Age: -

Region-enriched R4: 3.575/0.02891

TSEN2 0.986 - - - - - 0.986 Mlig455_010919 {REF} {Length: 2420} {TRANSSPLICED} {Pfam: tRNA intron endonuclease, catalytic C-terminal domain [PF01974.19, score=53.4]} {Human: ENSG00000154743, TSEN2, tRNA splicing endonuclease subunit 2, [RH, Score=108, Expect=7e-27]} {Mouse: ENSMUSG00000042389, Tsen2, tRNA splicing endonuclease subunit 2, [RH, Score=110, Expect=2e-27]} {Dmel: FBgn0051812, CG31812, [RH, Score=61.2, Expect=5e-11]} {Smed: dd_Smed_v6_13711_0_2, dd_Smed_v6_13711_0_2, [RH, Score=68.9, Expect=8e-14]} {RNA1509_27046} {RNA1310_25073} {RNA815_53112}
5. MligTC455_33245 63 1.31 Mlig455_070611

Neo: -

Age: Down-Up-Down

ATMIN 0.965 - - - - 0.965 - Mlig455_070611 {REF} {Length: 4464} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=27.0]; C2H2-type zinc finger [PF13894.8, score=21.1]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.9]} {Human: ENSG00000166454, ATMIN, ATM interactor, [RH, Score=75.5, Expect=8e-14]} {Mouse: ENSMUSG00000047388, Atmin, ATM interactor, [RH, Score=77.4, Expect=2e-14]} {Celegans: WBGene00016427, C34H4.5, [Score=48.1, Expect=9e-06]} {Smed: dd_Smed_v6_7949_0_1, dd_Smed_v6_7949_0_1, [RH, Score=77.8, Expect=2e-15]} {RNA1509_15608, RNA1509_34807} {RNA1310_15728.1, RNA1509_34807} {RNA1509_34807, RNA815_11525.1}
6. MligTC455_36012 18 0.38 Mlig455_002402, Mlig455_057634

Neo: -

Age: -

0.962 - 0.962 - - - -

Mlig455_002402 {REF} {Length: 1022} {RNA1509_35444} {RNA1310_65842} {RNA815_52332}

Mlig455_057634 {REF} {Length: 2686} {RNA1509_18844} {RNA1310_65842} {RNA815_52332}
7. MligTC455_06403 4 0.08 Mlig455_040739

Neo: -

Age: -

0.958 - 0.958 - - - - Mlig455_040739 {REF} {Length: 673} {NoTransDecoderORF} {RNA1310_131206} {RNA815_43319}
8. MligTC455_06237 4 0.08 Mlig455_005721

Neo: -

Age: -

0.956 - 0.956 - - - - Mlig455_005721 {REF} {Length: 420} {NoTransDecoderORF} {RNA1509_32965} {RNA1310_13566} {RNA815_2169}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA