M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_06418

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06418 80 1.66 Mlig455_007388

Neo: Germline

Age: Down-Up-Down

 Mlig455_007388 {REF} {Length: 3712} {Pfam: KH domain [PF00013.31, score=21.3]} {RNA1509_34412} {RNA1310_8069, RNA1509_34412} {RNA1509_34412, RNA815_3579}

Cumulative graph for MligTC455_06418

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -11.168 2.219 0.99997 1.00000
RegionR2 3.737 2.219 1.00000 1.00000
RegionR3 4.07 2.219 0.06050 0.43298
RegionR4 1.96 2.219 0.53250 0.85611
RegionR5 3.048 2.219 0.10926 0.32411
RegionR6 1.699 2.219 0.29093 0.88277
RegionR7 -1.51 2.219 1.00000 1.00000
RegionR8 -1.837 2.219 0.99944 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 8.025 2.219 1.00000 1.00000
RegenerationR2 2.911 2.219 0.17546 0.61596
RegenerationR3 1.128 2.219 0.42689 0.81931
RegenerationR4 3.494 2.219 0.13707 0.55740
RegenerationR5 2.831 2.219 0.21113 0.64515
RegenerationR6 3.393 2.219 0.17847 0.51218
RegenerationBL 1.903 2.219 1.00000 1.00000
RegenerationTP 6.356 2.219 0.06617 0.41504


Genes with expression patterns similar to MligTC455_06418

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06418 80 1.66 Mlig455_007388

Neo: Germline

Age: Down-Up-Down

 5 1.000 1.000 - 1.000 1.000 1.000 Mlig455_007388 {REF} {Length: 3712} {Pfam: KH domain [PF00013.31, score=21.3]} {RNA1509_34412} {RNA1310_8069, RNA1509_34412} {RNA1509_34412, RNA815_3579}
2. MligTC455_34008 27 0.57 Mlig455_014925

Neo: Germline

Age: -

 3.54 0.794 0.963 - 0.916 - 0.867 Mlig455_014925 {REF} {Length: 2371} {Pfam: KH domain [PF00013.31, score=27.9]} {Smed: dd_Smed_v6_38277_0_1, dd_Smed_v6_38277_0_1, [RH, Score=49.3, Expect=2e-06]} {RNA1509_5819} {RNA1310_18920} {RNA815_4984}
3. MligTC455_34009 44 0.91 Mlig455_045202

Neo: Germline

Age: -

 3.533 0.797 0.975 - 0.892 - 0.869 Mlig455_045202 {REF} {Length: 2499} {Pfam: KH domain [PF00013.31, score=27.8]} {Smed: dd_Smed_v6_38277_0_1, dd_Smed_v6_38277_0_1, [RH, Score=48.9, Expect=2e-06]} {RNA1509_5819} {RNA1310_18920} {RNA815_4984}
4. MligTC455_31477 295 6.14 Mlig455_027890

Neo: Germline

Age: -

Region-enriched R4: 4.404/0.00001
Region-enriched R5: 2.151/0.04896

 3.514 0.763 0.967 - 0.935 - 0.849 Mlig455_027890 {REF} {Length: 1611} {TRANSSPLICED} {RNA1509_15174} {RNA1310_20815, RNA1509_15174} {RNA1509_15174, RNA815_8028}
5. MligTC455_50842 33 0.68 Mlig455_046712

Neo: Germline

Age: logFC(26M/2M)=-0.808

 ARHGAP11A 2.751 - 0.952 - 0.911 - 0.888 Mlig455_046712 {REF} {Length: 2034} {Pfam: RhoGAP domain [PF00620.29, score=117.4]} {Human: ENSG00000198826, ARHGAP11A, Rho GTPase activating protein 11A, [RH, Score=126, Expect=1e-30]; ENSG00000275568, ARHGAP11A, Rho GTPase activating protein 11A, [RH, Score=126, Expect=1e-30]; ENSG00000282168, ARHGAP11A, Rho GTPase activating protein 11A, [RH, Score=124, Expect=5e-31]} {Mouse: ENSMUSG00000041219, Arhgap11a, Rho GTPase activating protein 11A, [RH, Score=115, Expect=6e-28]} {Dmel: FBgn0259216, RhoGAP102A, Rho GTPase activating protein at 102A, [RH, Score=75.9, Expect=2e-14]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=89.0, Expect=1e-18]} {Smed: dd_Smed_v6_6320_0_1, dd_Smed_v6_6320_0_1, [Score=93.2, Expect=2e-20]} {RNA1509_48726} {RNA1310_15193, RNA1509_48726} {RNA1509_48726, RNA815_14855}
6. MligTC455_26745 165 3.43 Mlig455_002120

Neo: Germline

Age: -

Region-enriched R4: 4.428/0.00276

 2.685 - 0.970 - 0.858 - 0.857 Mlig455_002120 {REF} {Length: 3064} {Pfam: C2H2-type zinc finger [PF13894.8, score=23.8]} {RNA1509_23865} {RNA1310_13309, RNA1509_23865} {RNA1509_23865, RNA815_11085}
7. MligTC455_24017 88 1.83 Mlig455_041982

Neo: Germline

Age: logFC(26M/2M)=0.557

 MYOF 2.627 - 0.789 - 0.997 - 0.841 Mlig455_041982 {REF} {Length: 4971} {Pfam: C2 domain [PF00168.32, score=33.6]} {Human: ENSG00000138119, MYOF, myoferlin, [Score=86.7, Expect=2e-17]} {Mouse: ENSMUSG00000048612, Myof, myoferlin, [Score=87.0, Expect=1e-17]} {Smed: dd_Smed_v6_6816_0_2, dd_Smed_v6_6816_0_2, [Score=104, Expect=8e-24]} {RNA1509_3003} {RNA1310_225.1} {RNA815_107.1}
8. MligTC455_47513 4684 97.58 Mlig455_020306

Neo: S/G2/M, no gonads

Age: Up-Down-Down, logFC(26M/2M)=-1.650

 1.888 - 0.953 - 0.935 - - Mlig455_020306 {REF} {Length: 633} {RNA1509_11864, RNA1509_12414, RNA1509_15745, RNA1509_3208, RNA1509_5470} {RNA1310_65548, RNA1509_11864, RNA1509_12414, RNA1509_15745, RNA1509_3208, RNA1509_5470} {RNA1509_11864, RNA1509_12414, RNA1509_15745, RNA1509_3208, RNA1509_5470, RNA815_34074}
9. MligTC455_38267 57 1.18 Mlig455_011068

Neo: Int S/G2/M

Age: Up-Down-Up

Region-enriched R4: 7.941/0.00000

 MORC3 1.866 - 0.968 - - - 0.898 Mlig455_011068 {REF} {Length: 2993} {TRANSSPLICED} {Pfam: Morc6 ribosomal protein S5 domain 2-like [PF17942.3, score=79.6]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF13589.8, score=57.8]; CW-type Zinc Finger [PF07496.17, score=36.5]; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase [PF02518.28, score=19.6]} {Human: ENSG00000159256, MORC3, MORC family CW-type zinc finger 3, [RH, Score=291, Expect=3e-86]} {Mouse: ENSMUSG00000039456, Morc3, microrchidia 3, [RH, Score=287, Expect=6e-85]; ENSMUSG00000031434, Morc4, microrchidia 4, [RH, Score=280, Expect=1e-82]} {Celegans: WBGene00022531, morc-1, MORC (Mouse microrchidia) family CW-type zinc finger protein, [Score=109, Expect=1e-24]} {Smed: dd_Smed_v6_2907_0_1, dd_Smed_v6_2907_0_1, [Score=137, Expect=2e-33]} {RNA1509_47315} {RNA1310_10266} {RNA815_34265}
10. MligTC455_41027 451 9.39 Mlig455_001406, Mlig455_064264

Neo: Germline

Age: -

Region-specific R4: 4.881

Region-enriched R4: 4.057/0.00001

 1.843 - 0.956 - 0.887 - -

Mlig455_001406 {REF} {Length: 1862} {TRANSSPLICED} {RNA1509_19037} {RNA1310_16100, RNA1509_19037} {RNA1509_19037, RNA815_18427}

Mlig455_064264 {REF} {Length: 1856} {TRANSSPLICED} {RNA1509_19037} {RNA1310_16100} {RNA815_18427}
11. MligTC455_31675 71 1.49 Mlig455_001806, Mlig455_062232

Neo: -

Age: -

 1.781 - 0.800 - - - 0.981

Mlig455_001806 {REF} {Length: 1760} {Pfam: Syntaxin 6, N-terminal [PF09177.13, score=32.9]} {RNA1509_55597} {RNA1310_30832} {RNA815_15518}

Mlig455_062232 {REF} {Length: 1371} {Pfam: Poly(ADP-ribose) polymerase catalytic domain [PF00644.22, score=58.4]} {RNA1509_55597} {RNA1310_35578} {RNA815_15518}
12. MligTC455_11167 10 0.2 Mlig455_026903, Mlig455_030752

Neo: Int S/G2/M

Age: -

 1.75 - 0.960 - - - 0.790

Mlig455_026903 {REF} {Length: 766} {NoTransDecoderORF} {RNA1509_25061} {RNA1310_123861} {RNA815_24984}

Mlig455_030752 {REF} {Length: 849} {NoTransDecoderORF} {RNA1509_25061} {RNA1310_123861} {RNA815_24984}
13. MligTC455_16474 22 0.45 Mlig455_025196, Mlig455_029879

Neo: -

Age: -

Region-enriched R4: 6.273/0.01003

 1.749 - 0.952 - - - 0.797

Mlig455_025196 {REF} {Length: 729} {RNA1509_23706} {RNA1310_77009} {RNA815_30456.1}

Mlig455_029879 {REF} {Length: 729} {RNA1509_23706} {RNA1310_77009} {RNA815_30456.1}
14. MligTC455_16379 39 0.82 Mlig455_040330

Neo: Int S/G2/M

Age: -

 1.719 0.762 0.957 - - - - Mlig455_040330 {REF} {Length: 1065} {RNA1509_31995} {RNA1310_2330.3} {RNA815_34872}
15. MligTC455_06209 33 0.69 Mlig455_007889, Mlig455_065364

Neo: Germline

Age: -

 1.704 0.732 0.972 - - - -

Mlig455_007889 {REF} {Length: 1139} {NoTransDecoderORF} {RNA1310_60077} {RNA815_32087}

Mlig455_065364 {REF} {Length: 1221} {NoTransDecoderORF} {RNA1310_60077} {RNA815_32087}
16. MligTC455_15634 31 0.65 Mlig455_010308

Neo: Int S/G2/M

Age: Up-Down-Down

 1.688 - 0.715 - 0.973 - - Mlig455_010308 {REF} {Length: 1842} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=25.3]} {Smed: dd_Smed_v6_1355_0_1, dd_Smed_v6_1355_0_1, [Score=44.3, Expect=7e-06]} {RNA1509_21736} {RNA1310_42153} {RNA815_49210.1}
17. MligTC455_46651 35 0.73 Mlig455_028378, Mlig455_066202, Mlig455_068837

Neo: Germline

Age: -

 SLC46A3 0.997 - - - 0.997 - -

Mlig455_028378 {REF} {Length: 1921} {Pfam: Major Facilitator Superfamily [PF07690.18, score=59.1]; Sugar (and other) transporter [PF00083.26, score=31.9]} {Dmel: FBgn0030576, CG15890, [Score=52.0, Expect=2e-07]} {Smed: dd_Smed_v6_10822_0_1, dd_Smed_v6_10822_0_1, [Score=166, Expect=2e-48]} {RNA1509_40290} {RNA1310_51274} {RNA815_19265}

Mlig455_066202 {REF} {Length: 2334} {Pfam: Major Facilitator Superfamily [PF07690.18, score=59.1]; Sugar (and other) transporter [PF00083.26, score=31.9]} {Dmel: FBgn0030576, CG15890, [Score=52.0, Expect=2e-07]} {Smed: dd_Smed_v6_10822_0_1, dd_Smed_v6_10822_0_1, [Score=166, Expect=2e-48]} {RNA1509_40290} {RNA1310_51274} {RNA815_19265}

Mlig455_068837 {REF} {Length: 2118} {Pfam: Major Facilitator Superfamily [PF07690.18, score=88.8]; Sugar (and other) transporter [PF00083.26, score=29.5]} {Human: ENSG00000139508, SLC46A3, solute carrier family 46 member 3, [Score=84.0, Expect=1e-16]} {Mouse: ENSMUSG00000029650, Slc46a3, solute carrier family 46, member 3, [Score=86.3, Expect=1e-17]} {Dmel: FBgn0030576, CG15890, [Score=98.2, Expect=3e-21]} {Celegans: WBGene00016705, C46C11.2, [RH, Score=87.4, Expect=3e-18]} {Smed: dd_Smed_v6_10822_0_1, dd_Smed_v6_10822_0_1, [RH, Score=328, Expect=3e-107]} {RNA1509_40290} {RNA1310_51274} {RNA815_19265}
18. MligTC455_17252 201 4.19 Mlig455_029295, Mlig455_058875

Neo: Germline

Age: -

 0.996 - - - 0.996 - -

Mlig455_029295 {REF} {Length: 2201} {RNA1509_944} {RNA1310_16221} {RNA815_3972}

Mlig455_058875 {REF} {Length: 3126} {Pfam: Lectin C-type domain [PF00059.23, score=26.1]} {RNA1509_14381, RNA1509_944} {RNA1310_16221, RNA1509_14381} {RNA1509_14381, RNA815_3972}
19. MligTC455_05058 12 0.24 Mlig455_014379

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.266

 F5 0.986 - - - - - 0.986 Mlig455_014379 {REF} {Length: 1298} {Human: ENSG00000198734, F5, coagulation factor V, [Score=50.8, Expect=3e-06]} {RNA1310_79473.1} {RNA815_61333}
20. MligTC455_24326 9 0.18 Mlig455_024504, Mlig455_046364

Neo: Irradiation

Age: Up-Down-Down

 SETMAR 0.985 - - - - - 0.985

Mlig455_024504 {REF} {Length: 1210} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=88.7]; HTH domain in Mos1 transposase [PF17906.3, score=35.8]; Homeodomain-like domain [PF13565.8, score=28.2]; DDE superfamily endonuclease [PF13358.8, score=28.1]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=19.7]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=178, Expect=1e-50]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [RH, Score=79.0, Expect=4e-18]} {RNA1509_29601} {RNA1310_16439.1} {RNA815_14796}

Mlig455_046364 {REF} {Length: 1430} {Pfam: Transposase (partial DDE domain) [PF01359.20, score=88.7]; HTH domain in Mos1 transposase [PF17906.3, score=35.8]; Homeodomain-like domain [PF13565.8, score=28.2]; DDE superfamily endonuclease [PF13358.8, score=28.1]; Helix-turn-helix domain (DUF4817) [PF16087.7, score=19.7]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=178, Expect=1e-50]} {Smed: dd_Smed_v6_13618_0_23, dd_Smed_v6_13618_0_23, [RH, Score=79.0, Expect=4e-18]} {RNA1509_29601} {RNA1310_16439.1, RNA1509_29601} {RNA1509_29601, RNA815_14796}
21. MligTC455_31134 12 0.25 Mlig455_018771

Neo: -

Age: -

 0.975 - 0.975 - - - - Mlig455_018771 {REF} {Length: 1954} {RNA1310_18536.1} {RNA815_28798}
22. MligTC455_16336 65 1.35 Mlig455_004452, Mlig455_015655, Mlig455_023763, Mlig455_037144, Mlig455_057438

Neo: -

Age: -

 0.973 - - - - 0.973 -

Mlig455_004452 {REF} {Length: 211} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764}

Mlig455_015655 {REF} {Length: 618} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764}

Mlig455_023763 {REF} {Length: 618} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764}

Mlig455_037144 {REF} {Length: 1001} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764}

Mlig455_057438 {REF} {Length: 743} {NoTransDecoderORF} {RNA1310_41710} {RNA815_19764}
23. MligTC455_10827 38 0.79 Mlig455_038663

Neo: -

Age: -

 0.972 - - - - 0.972 - Mlig455_038663 {REF} {Length: 349} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_107239}
24. MligTC455_45531 268 5.59 Mlig455_045369

Neo: Germline

Age: -

Region-enriched R5: 3.559/0.00001

 CDC42BPG 0.972 - - - 0.972 - - Mlig455_045369 {REF} {Length: 3058} {Pfam: Protein kinase domain [PF00069.27, score=104.5]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=72.3]} {Human: ENSG00000171219, CDC42BPG, CDC42 binding protein kinase gamma, [Score=90.5, Expect=4e-18]; ENSG00000198752, CDC42BPB, CDC42 binding protein kinase beta, [Score=89.7, Expect=6e-18]; ENSG00000143776, CDC42BPA, CDC42 binding protein kinase alpha, [Score=86.7, Expect=6e-17]} {Mouse: ENSMUSG00000107268, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [Score=90.9, Expect=2e-18]; ENSMUSG00000024769, Cdc42bpg, CDC42 binding protein kinase gamma (DMPK-like), [Score=90.9, Expect=2e-18]; ENSMUSG00000021279, Cdc42bpb, CDC42 binding protein kinase beta, [Score=89.7, Expect=4e-18]; ENSMUSG00000026490, Cdc42bpa, CDC42 binding protein kinase alpha, [Score=87.4, Expect=3e-17]} {Dmel: FBgn0023081, gek, genghis khan, [Score=87.0, Expect=2e-17]} {Celegans: WBGene00006437, mrck-1, Serine/threonine-protein kinase mrck-1, [Score=90.1, Expect=2e-18]} {Smed: dd_Smed_v6_6462_0_1, dd_Smed_v6_6462_0_1, [Score=84.3, Expect=5e-17]} {RNA1509_27359, RNA1509_53825} {RNA1310_5286.1, RNA1509_27359, RNA1509_53825} {RNA1509_27359, RNA1509_53825, RNA815_6391}
25. MligTC455_08163 12 0.24 Mlig455_031850

Neo: -

Age: -

 0.964 - 0.964 - - - - Mlig455_031850 {REF} {Length: 930} {RNA1509_57429} {RNA1310_73907} {RNA815_44596}
26. MligTC455_04059 25 0.52 Mlig455_032168

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_032168 {REF} {Length: 2630} {Pfam: FLYWCH zinc finger domain [PF04500.18, score=30.1]; PHD-finger [PF00628.31, score=26.6]; FAM76 protein [PF16046.7, score=21.6]} {RNA1310_70692} {RNA815_33489}
27. MligTC455_09549 27 0.56 Mlig455_020376, Mlig455_020436

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=3.308

 0.962 - - - - - 0.962

Mlig455_020376 {REF} {Length: 2681} {Pfam: Domain of unknown function (DUF4337) [PF14235.8, score=21.6]} {RNA1509_43025} {RNA1310_31813} {RNA815_27771}

Mlig455_020436 {REF} {Length: 2495} {Pfam: Domain of unknown function (DUF4337) [PF14235.8, score=21.7]} {RNA1509_43025} {RNA1310_83898} {RNA815_27771}
28. MligTC455_36415 57 1.19 Mlig455_036427, Mlig455_054598

Neo: -

Age: -

 0.959 - - - - - 0.959

Mlig455_036427 {REF} {Length: 744} {NoTransDecoderORF} {RNA1310_147078}

Mlig455_054598 {REF} {Length: 1921} {Pfam: ISXO2-like transposase domain [PF12762.9, score=19.1]} {RNA1509_22299} {RNA1310_147078} {RNA815_26270}
29. MligTC455_51736 34 0.72 Mlig455_060266

Neo: -

Age: Up-Down-Down

 HFM1 0.959 - - - 0.959 - - Mlig455_060266 {REF} {Length: 4618} {Pfam: Sec63 Brl domain [PF02889.18, score=65.7]; Helicase conserved C-terminal domain [PF00271.33, score=29.7]; Helix-hairpin-helix domain [PF14520.8, score=22.7]} {Human: ENSG00000162669, HFM1, HFM1, ATP dependent DNA helicase homolog, [Score=360, Expect=1e-102]} {Mouse: ENSMUSG00000043410, Hfm1, HFM1, ATP-dependent DNA helicase homolog, [Score=357, Expect=6e-102]} {Dmel: FBgn0263599, l(3)72Ab, lethal (3) 72Ab, [Score=173, Expect=4e-43]} {Celegans: WBGene00012896, snrp-200, Putative U5 small nuclear ribonucleoprotein 200 kDa helicase, [Score=167, Expect=2e-41]} {Smed: dd_Smed_v6_24408_0_4, dd_Smed_v6_24408_0_4, [Score=320, Expect=6e-91]} {RNA1509_54934} {RNA1310_28874.1} {RNA815_50448}
30. MligTC455_01697 7 0.14 Mlig455_021717

Neo: -

Age: -

 0.958 - 0.958 - - - - Mlig455_021717 {REF} {Length: 629} {RNA1310_132453}
31. MligTC455_20498 4 0.08 Mlig455_001455

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_001455 {REF} {Length: 2447}
32. MligTC455_22528 6 0.13 Mlig455_042009

Neo: -

Age: -

 0.958 - 0.958 - - - - Mlig455_042009 {REF} {Length: 864} {Pfam: DDE superfamily endonuclease [PF13358.8, score=39.6]} {Smed: dd_Smed_v6_66824_0_1, dd_Smed_v6_66824_0_1, [Score=82.0, Expect=3e-20]} {RNA1509_13226} {RNA1310_12978} {RNA815_3193.1}
33. MligTC455_03554 12 0.25 Mlig455_035421

Neo: Int S/G2/M

Age: -

 0.957 - 0.957 - - - - Mlig455_035421 {REF} {Length: 611} {RNA1310_52309}
34. MligTC455_36430 11 0.24 Mlig455_026485

Neo: Int S/G2/M

Age: -

 0.957 - 0.957 - - - - Mlig455_026485 {REF} {Length: 1134} {NoTransDecoderORF} {RNA1509_19049} {RNA1310_10356.1} {RNA815_21371.1}
35. MligTC455_01007 2 0.04 Mlig455_017081

Neo: -

Age: -

 0.956 - 0.956 - - - - Mlig455_017081 {REF} {Length: 454} {NoTransDecoderORF} {RNA1509_30974} {RNA1310_87293.1} {RNA815_30500.1}
36. MligTC455_01719 15 0.31 Mlig455_041342

Neo: -

Age: -

 0.955 - 0.955 - - - - Mlig455_041342 {REF} {Length: 436} {NoTransDecoderORF} {RNA1509_10188} {RNA1310_41959.1} {RNA815_19701}
37. MligTC455_09251 183 3.81 Mlig455_060993

Neo: Germline

Age: logFC(26M/2M)=0.837

Region-specific R4: 5.908

Region-enriched R4: 5.211/0.00000

 0.954 - 0.954 - - - - Mlig455_060993 {REF} {Length: 877} {RNA1509_19862} {RNA1310_41889.1, RNA1509_19862} {RNA1509_19862, RNA815_21034.1}
38. MligTC455_36260 600 12.5 Mlig455_052627, Mlig455_052677

Neo: Irradiation

Age: Down-Up-Up, logFC(26M/2M)=0.635

Region-enriched R5: 4.514/0.00000

 CA7 0.953 - - - 0.953 - -

Mlig455_052627 {REF} {Length: 1361} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=156.5]} {Human: ENSG00000168748, CA7, carbonic anhydrase 7, [Score=96.3, Expect=2e-22]} {Mouse: ENSMUSG00000027562, Car2, carbonic anhydrase 2, [Score=87.4, Expect=2e-19]} {Dmel: FBgn0038956, CG5379, [Score=80.1, Expect=8e-17]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=84.7, Expect=7e-19]} {RNA1509_32127} {RNA1310_24871.2} {RNA815_13236.1}

Mlig455_052677 {REF} {Length: 1425} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=156.5]} {Human: ENSG00000168748, CA7, carbonic anhydrase 7, [Score=96.3, Expect=2e-22]} {Mouse: ENSMUSG00000027562, Car2, carbonic anhydrase 2, [Score=87.4, Expect=2e-19]} {Dmel: FBgn0038956, CG5379, [Score=80.1, Expect=8e-17]} {Celegans: WBGene00000283, cah-5, Putative carbonic anhydrase 5, [Score=79.0, Expect=2e-16]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=84.7, Expect=7e-19]} {RNA1509_20064, RNA1509_24457, RNA1509_32127} {RNA1310_24871.2, RNA1509_20064, RNA1509_24457} {RNA1509_20064, RNA1509_24457, RNA815_13236.1}
39. MligTC455_01957 5 0.11 Mlig455_045451

Neo: -

Age: -

 0.952 - 0.952 - - - - Mlig455_045451 {REF} {Length: 773} {RNA1509_47009} {RNA1310_60641} {RNA815_62725}
40. MligTC455_07078 7 0.15 Mlig455_016414

Neo: -

Age: -

 0.952 - 0.952 - - - - Mlig455_016414 {REF} {Length: 816} {NoTransDecoderORF} {RNA1310_85904} {RNA815_52079}
41. MligTC455_13175 16 0.34 Mlig455_025368

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 5.751/0.00133

 0.952 - 0.952 - - - - Mlig455_025368 {REF} {Length: 1727} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=27.4]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=112, Expect=1e-26]} {RNA1310_55905} {RNA815_48724}
42. MligTC455_16843 82 1.7 Mlig455_040504, Mlig455_040508, Mlig455_040520

Neo: Int S/G2/M

Age: Up-Down-Up

 ZNF608, ZNF609 0.951 - 0.951 - - - -

Mlig455_040504 {REF} {Length: 2274} {RNA1310_109158} {RNA815_63807}

Mlig455_040508 {REF} {Length: 2544} {Human: ENSG00000168916, ZNF608, zinc finger protein 608, [Score=119, Expect=1e-27]; ENSG00000180357, ZNF609, zinc finger protein 609, [Score=119, Expect=1e-27]} {Mouse: ENSMUSG00000052713, Zfp608, zinc finger protein 608, [Score=110, Expect=4e-25]; ENSMUSG00000040524, Zfp609, zinc finger protein 609, [Score=109, Expect=1e-24]} {Dmel: FBgn0285917, sbb, scribbler, [Score=109, Expect=8e-25]} {Smed: dd_Smed_v6_9549_0_1, dd_Smed_v6_9549_0_1, [Score=112, Expect=4e-27]} {RNA1310_62860} {RNA815_63807}

Mlig455_040520 {REF} {Length: 4720} {Human: ENSG00000180357, ZNF609, zinc finger protein 609, [Score=118, Expect=2e-27]; ENSG00000168916, ZNF608, zinc finger protein 608, [Score=118, Expect=2e-27]} {Mouse: ENSMUSG00000052713, Zfp608, zinc finger protein 608, [Score=119, Expect=9e-28]} {Dmel: FBgn0285917, sbb, scribbler, [Score=109, Expect=8e-25]} {Smed: dd_Smed_v6_9549_0_1, dd_Smed_v6_9549_0_1, [Score=112, Expect=4e-27]} {RNA1310_62860} {RNA815_63807}
43. MligTC455_31682 194 4.05 Mlig455_045912, Mlig455_050797, Mlig455_056090, Mlig455_062628, Mlig455_063332, Mlig455_067537

Neo: Irradiation

Age: Up-Up-Down

Region-enriched R5: 3.996/0.00015

 PIF1 0.95 - - - 0.950 - -

Mlig455_045912 {REF} {Length: 6495} {Pfam: PIF1-like helicase [PF05970.16, score=268.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.9]; AAA domain [PF13604.8, score=43.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=51.2, Expect=1e-05]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=50.8, Expect=1e-05]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=58.9, Expect=3e-08]} {Celegans: WBGene00018020, F33H12.6, [Score=659, Expect=0.0]} {Smed: dd_Smed_v6_22430_0_1, dd_Smed_v6_22430_0_1, [Score=83.2, Expect=7e-19]} {RNA1509_7410} {RNA1310_1350} {RNA815_358.1}

Mlig455_050797 {REF} {Length: 6801} {Pfam: PIF1-like helicase [PF05970.16, score=330.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.6]; AAA domain [PF13604.8, score=42.9]; Helicase [PF02689.16, score=23.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=90.5, Expect=8e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=83.2, Expect=1e-15]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=801, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Mlig455_056090 {REF} {Length: 8134} {Pfam: PIF1-like helicase [PF05970.16, score=331.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.9]; AAA domain [PF13604.8, score=46.0]; Helicase [PF02689.16, score=24.0]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.9]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=84.7, Expect=6e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=86.3, Expect=1e-16]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=80.9, Expect=4e-15]} {Celegans: WBGene00018020, F33H12.6, [Score=696, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=108, Expect=4e-24]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1}

Mlig455_062628 {REF} {Length: 5915} {Pfam: PIF1-like helicase [PF05970.16, score=285.3]; Helitron helicase-like domain at N-terminus [PF14214.8, score=191.6]; Helicase [PF02689.16, score=24.2]; AAA domain [PF13604.8, score=22.2]; UvrD-like helicase C-terminal domain [PF13538.8, score=20.2]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=82.4, Expect=2e-15]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=86.3, Expect=1e-16]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=77.4, Expect=4e-14]} {Celegans: WBGene00018020, F33H12.6, [Score=596, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=90.1, Expect=3e-18]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Mlig455_063332 {REF} {Length: 6737} {Pfam: PIF1-like helicase [PF05970.16, score=332.8]; Helitron helicase-like domain at N-terminus [PF14214.8, score=199.7]; AAA domain [PF13604.8, score=43.4]; Helicase [PF02689.16, score=23.6]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.6]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=89.7, Expect=2e-17]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=87.0, Expect=7e-17]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=808, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=107, Expect=2e-23]} {RNA1509_7410} {RNA1310_3337} {RNA815_358.1}

Mlig455_067537 {REF} {Length: 7121} {Pfam: PIF1-like helicase [PF05970.16, score=334.1]; Helitron helicase-like domain at N-terminus [PF14214.8, score=198.4]; AAA domain [PF13604.8, score=42.2]; Helicase [PF02689.16, score=23.7]; UvrD-like helicase C-terminal domain [PF13538.8, score=19.7]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=87.0, Expect=1e-16]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=89.4, Expect=2e-17]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=61.2, Expect=6e-09]} {Celegans: WBGene00018020, F33H12.6, [Score=735, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_7410} {RNA1310_616.1} {RNA815_358.1}
44. MligTC455_54080 3 0.07 Mlig455_028629

Neo: -

Age: -

 0.95 - - - - - 0.950 Mlig455_028629 {REF} {Length: 879} {NoTransDecoderORF} {RNA1509_8078} {RNA1310_324.3} {RNA815_8663}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA