TomoSeq data search

Data search

Results for MligTC455_06450

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_06450	18	0.37	Mlig455_002836, Mlig455_002845	Neo: Irradiation Age: -	SLC7A1, SLC7A4	Mlig455_002836 {REF} {Length: 2434} {TRANSSPLICED} {Pfam: C-terminus of AA_permease [PF13906.8, score=72.9]; Amino acid permease [PF13520.8, score=59.4]; Amino acid permease [PF00324.23, score=54.9]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=232, Expect=1e-69]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=232, Expect=2e-69]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=238, Expect=5e-72]; ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=233, Expect=5e-70]} {Dmel: FBgn0036984, CG13248, [Score=251, Expect=1e-76]} {Celegans: WBGene00015197, B0454.6, [Score=222, Expect=2e-66]} {Smed: dd_Smed_v6_8652_0_6, dd_Smed_v6_8652_0_6, [Score=156, Expect=2e-42]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629} Mlig455_002845 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=121.0]; Amino acid permease [PF00324.23, score=95.2]} {Human: ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=354, Expect=4e-114]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=368, Expect=9e-120]} {Dmel: FBgn0036984, CG13248, [Score=386, Expect=1e-126]} {Celegans: WBGene00016806, C50D2.2, [Score=374, Expect=4e-123]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=266, Expect=5e-84]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_06450

0.37

Mlig455_002836, Mlig455_002845

Neo: Irradiation

Age: -

SLC7A1, SLC7A4

Mlig455_002836 {REF} {Length: 2434} {TRANSSPLICED} {Pfam: C-terminus of AA_permease [PF13906.8, score=72.9]; Amino acid permease [PF13520.8, score=59.4]; Amino acid permease [PF00324.23, score=54.9]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=232, Expect=1e-69]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=232, Expect=2e-69]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=238, Expect=5e-72]; ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=233, Expect=5e-70]} {Dmel: FBgn0036984, CG13248, [Score=251, Expect=1e-76]} {Celegans: WBGene00015197, B0454.6, [Score=222, Expect=2e-66]} {Smed: dd_Smed_v6_8652_0_6, dd_Smed_v6_8652_0_6, [Score=156, Expect=2e-42]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629}

Mlig455_002845 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=121.0]; Amino acid permease [PF00324.23, score=95.2]} {Human: ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=354, Expect=4e-114]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=368, Expect=9e-120]} {Dmel: FBgn0036984, CG13248, [Score=386, Expect=1e-126]} {Celegans: WBGene00016806, C50D2.2, [Score=374, Expect=4e-123]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=266, Expect=5e-84]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629}

Cumulative graph for MligTC455_06450

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-2.225	0.921	0.99946	1.00000
RegionR2	1.913	0.921	0.99952	1.00000
RegionR3	-0.988	0.921	0.85990	1.00000
RegionR4	0.911	0.921	0.88596	1.00000
RegionR5	-1.842	0.921	0.97409	1.00000
RegionR6	0.674	0.921	0.57453	1.00000
RegionR7	0.824	0.921	0.99954	1.00000
RegionR8	0.733	0.921	0.99949	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	2.863	0.921	0.99987	1.00000
RegenerationR2	3.401	0.921	0.00865	0.14841
RegenerationR3	2.631	0.921	0.05446	0.40094
RegenerationR4	-0.944	0.921	0.46436	0.84984
RegenerationR5	4.377	0.921	0.00036	0.03013
RegenerationR6	3.525	0.921	0.00683	0.10094
RegenerationBL	2.679	0.921	0.08999	0.35144
RegenerationTP	0.448	0.921	0.99990	1.00000

Genes with expression patterns similar to MligTC455_06450

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_06450	18	0.37	Mlig455_002836, Mlig455_002845	Neo: Irradiation Age: -	SLC7A1, SLC7A4	4	1.000	1.000	-	-	1.000	1.000	Mlig455_002836 {REF} {Length: 2434} {TRANSSPLICED} {Pfam: C-terminus of AA_permease [PF13906.8, score=72.9]; Amino acid permease [PF13520.8, score=59.4]; Amino acid permease [PF00324.23, score=54.9]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=232, Expect=1e-69]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=232, Expect=2e-69]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=238, Expect=5e-72]; ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=233, Expect=5e-70]} {Dmel: FBgn0036984, CG13248, [Score=251, Expect=1e-76]} {Celegans: WBGene00015197, B0454.6, [Score=222, Expect=2e-66]} {Smed: dd_Smed_v6_8652_0_6, dd_Smed_v6_8652_0_6, [Score=156, Expect=2e-42]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629} Mlig455_002845 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=121.0]; Amino acid permease [PF00324.23, score=95.2]} {Human: ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=354, Expect=4e-114]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=368, Expect=9e-120]} {Dmel: FBgn0036984, CG13248, [Score=386, Expect=1e-126]} {Celegans: WBGene00016806, C50D2.2, [Score=374, Expect=4e-123]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=266, Expect=5e-84]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629}
2.	MligTC455_20641	7	0.14	Mlig455_053995	Neo: - Age: -	ASIC5	0.993	-	-	-	-	0.993	-	Mlig455_053995 {REF} {Length: 2623} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=153.0]} {Human: ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=58.5, Expect=3e-08]; ENSG00000262505, AC093830.1, acid sensing ion channel subunit family member 5, [Score=57.8, Expect=3e-08]} {Mouse: ENSMUSG00000028008, Asic5, acid-sensing (proton-gated) ion channel family member 5, [Score=57.4, Expect=3e-08]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=57.0, Expect=3e-08]} {Smed: dd_Smed_v6_19727_0_1, dd_Smed_v6_19727_0_1, [Score=72.0, Expect=5e-13]} {RNA1509_35422} {RNA1310_31749} {RNA815_35068}
3.	MligTC455_01840	5	0.11	Mlig455_024352	Neo: - Age: -		0.971	-	-	-	-	-	0.971	Mlig455_024352 {REF} {Length: 1208} {RNA1310_98047}
4.	MligTC455_17474	764	15.92	Mlig455_011194, Mlig455_011222, Mlig455_024747	Neo: - Age: Down-Up-Up Region-enriched R6: 4.238/0.01164 Region-enriched R2: 4.221/0.04766		0.968	-	-	-	-	-	0.968	Mlig455_011194 {REF} {Length: 662} {RNA1509_53854} {RNA1310_31915} {RNA815_45583} Mlig455_011222 {REF} {Length: 1027} {RNA1509_53854} {RNA1310_31915, RNA1509_53854} {RNA1509_53854, RNA815_45583} Mlig455_024747 {REF} {Length: 639} {RNA1509_53854} {RNA1310_35845} {RNA815_45583}
5.	MligTC455_10983	16	0.34	Mlig455_012583	Neo: - Age: -		0.967	0.967	-	-	-	-	-	Mlig455_012583 {REF} {Length: 1136} {NoTransDecoderORF} {RNA1310_32406} {RNA815_44793}
6.	MligTC455_17473	91	1.9	Mlig455_024742	Neo: - Age: Up-Down-Up Region-enriched R6: 4.336/0.01880		0.965	-	-	-	-	-	0.965	Mlig455_024742 {REF} {Length: 1023} {RNA1509_53854} {RNA1310_31915} {RNA815_45583}
7.	MligTC455_19815	81	1.68	Mlig455_043273, Mlig455_043299	Neo: - Age: -		0.965	-	-	-	-	0.965	-	Mlig455_043273 {REF} {Length: 575} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1} Mlig455_043299 {REF} {Length: 581} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45712} {RNA1310_38057.2} {RNA815_23034.1}
8.	MligTC455_06942	18	0.37	Mlig455_047631	Neo: - Age: -		0.964	-	-	-	-	-	0.964	Mlig455_047631 {REF} {Length: 1570} {RNA1310_122756}
9.	MligTC455_14836	12	0.26	Mlig455_069790	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_069790 {REF} {Length: 1585} {NoTransDecoderORF}