M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_06942

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_06942 18 0.37 Mlig455_047631

Neo: -

Age: -

 Mlig455_047631 {REF} {Length: 1570} {RNA1310_122756}

Cumulative graph for MligTC455_06942

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.261 0.875 1.00000 1.00000
RegionR2 0.575 0.875 1.00000 1.00000
RegionR3 0.46 0.875 0.99999 1.00000
RegionR4 -0.442 0.875 0.99992 1.00000
RegionR5 0.283 0.875 1.00000 1.00000
RegionR6 0.318 0.875 0.99998 1.00000
RegionR7 0.153 0.875 0.99998 1.00000
RegionR8 -0.087 0.875 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.345 0.875 1.00000 1.00000
RegenerationR2 4.32 0.875 0.00910 0.15215
RegenerationR3 4.277 0.875 0.06474 0.42886
RegenerationR4 2.233 0.875 0.18531 0.62655
RegenerationR5 3.074 0.875 0.06366 0.39917
RegenerationR6 2.994 0.875 0.17116 0.50252
RegenerationBL 3.21 0.875 0.16321 0.48432
RegenerationTP 0.104 0.875 1.00000 1.00000


Genes with expression patterns similar to MligTC455_06942

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_06942 18 0.37 Mlig455_047631

Neo: -

Age: -

 3 - - - 1.000 1.000 1.000 Mlig455_047631 {REF} {Length: 1570} {RNA1310_122756}
2. MligTC455_08512 8 0.17 Mlig455_003206

Neo: -

Age: -

 1.802 - - - 0.963 0.839 - Mlig455_003206 {REF} {Length: 422} {NoTransDecoderORF}
3. MligTC455_04548 10 0.21 Mlig455_047007

Neo: -

Age: -

 TYMP 0.99 - - - 0.990 - - Mlig455_047007 {REF} {Length: 1462} {TRANSSPLICED} {Pfam: Glycosyl transferase family, a/b domain [PF00591.23, score=114.4]; Glycosyl transferase family, helical bundle domain [PF02885.19, score=55.5]; Pyrimidine nucleoside phosphorylase C-terminal domain [PF07831.15, score=27.3]} {Human: ENSG00000025708, TYMP, thymidine phosphorylase, [RH, Score=324, Expect=7e-106]} {Mouse: ENSMUSG00000022615, Tymp, thymidine phosphorylase, [RH, Score=320, Expect=1e-104]} {Smed: dd_Smed_v6_869_0_1, dd_Smed_v6_869_0_1, [RH, Score=323, Expect=2e-106]} {RNA1509_12879} {RNA1310_15453} {RNA815_1859}
4. MligTC455_52384 58 1.21 Mlig455_038635

Neo: -

Age: Up-Down-Up

 ERP44 0.985 - - - - 0.985 - Mlig455_038635 {REF} {Length: 2771} {Pfam: Thioredoxin-like domain [PF13848.8, score=106.4]; Thioredoxin [PF00085.22, score=64.3]; Calsequestrin [PF01216.19, score=19.7]} {Human: ENSG00000023318, ERP44, endoplasmic reticulum protein 44, [Score=243, Expect=4e-76]} {Mouse: ENSMUSG00000028343, Erp44, endoplasmic reticulum protein 44, [Score=251, Expect=1e-79]} {Dmel: FBgn0030734, CG9911, [Score=237, Expect=2e-74]} {Celegans: WBGene00016278, erp-44.1, [Score=238, Expect=3e-75]} {Smed: dd_Smed_v6_2276_0_1, dd_Smed_v6_2276_0_1, [Score=236, Expect=6e-74]} {RNA1509_48143, RNA1509_53790} {RNA1310_14258.1, RNA1509_48143, RNA1509_53790} {RNA1509_48143, RNA1509_53790, RNA815_8957.1}
5. MligTC455_17473 91 1.9 Mlig455_024742

Neo: -

Age: Up-Down-Up

Region-enriched R6: 4.336/0.01880

 0.981 - - - - - 0.981 Mlig455_024742 {REF} {Length: 1023} {RNA1509_53854} {RNA1310_31915} {RNA815_45583}
6. MligTC455_06689 15 0.31 Mlig455_033132

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_033132 {REF} {Length: 2574} {Smed: dd_Smed_v6_12949_0_1, dd_Smed_v6_12949_0_1, [RH, Score=76.6, Expect=3e-17]} {RNA1310_117049}
7. MligTC455_09651 5 0.09 Mlig455_065649

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_065649 {REF} {Length: 398} {Celegans: WBGene00015646, mlt-10, [Score=80.1, Expect=2e-18]}
8. MligTC455_19803 48 1 Mlig455_020073, Mlig455_040876, Mlig455_066459, Mlig455_066460

Neo: -

Age: -

 KREMEN1, KREMEN2 0.97 - - - - 0.970 -

Mlig455_020073 {REF} {Length: 1139} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}

Mlig455_040876 {REF} {Length: 898} {Pfam: WSC domain [PF01822.21, score=61.5]; PAN domain [PF00024.28, score=19.4]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=48.1, Expect=3e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=57.8, Expect=1e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=63.9, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=45.4, Expect=9e-06]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}

Mlig455_066459 {REF} {Length: 1488} {Pfam: WSC domain [PF01822.21, score=54.9]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=50.8, Expect=5e-07]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=59.7, Expect=4e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}

Mlig455_066460 {REF} {Length: 2320} {Pfam: WSC domain [PF01822.21, score=57.3]} {Human: ENSG00000131650, KREMEN2, kringle containing transmembrane protein 2, [Score=47.8, Expect=6e-06]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=60.5, Expect=2e-10]} {RNA1509_53783} {RNA1310_60562} {RNA815_37853}
9. MligTC455_05827 107 2.23 Mlig455_026680

Neo: -

Age: Up-Down-Up

 0.968 - - - - 0.968 - Mlig455_026680 {REF} {Length: 2237} {TRANSSPLICED} {RNA1509_15690} {RNA1310_208} {RNA815_15163}
10. MligTC455_41315 18 0.38 Mlig455_050678

Neo: -

Age: -

 GALR2 0.968 - - - - 0.968 - Mlig455_050678 {REF} {Length: 1712} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=85.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=32.2]; Serpentine type 7TM GPCR chemoreceptor Srx [PF10328.11, score=21.2]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.4]} {Human: ENSG00000182687, GALR2, galanin receptor 2, [Score=63.2, Expect=3e-10]} {Mouse: ENSMUSG00000024798, Htr7, 5-hydroxytryptamine (serotonin) receptor 7, [Score=63.5, Expect=1e-10]; ENSMUSG00000037393, Nmur2, neuromedin U receptor 2, [Score=60.8, Expect=9e-10]} {Dmel: FBgn0266429, AstA-R1, Allatostatin A receptor 1, [Score=57.4, Expect=1e-08]} {Celegans: WBGene00018728, frpr-8, FMRFamide Peptide Receptor family, [Score=50.4, Expect=1e-06]} {Smed: dd_Smed_v6_14726_0_1, dd_Smed_v6_14726_0_1, [Score=102, Expect=5e-24]} {RNA1509_29633} {RNA1310_16447, RNA1509_29633} {RNA1509_29633, RNA815_8324}
11. MligTC455_00810 10 0.22 Mlig455_049746

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_049746 {REF} {Length: 577} {NoTransDecoderORF} {RNA1509_54430} {RNA1310_6578} {RNA815_41194.1}
12. MligTC455_07201 6 0.12 Mlig455_007914, Mlig455_008021

Neo: -

Age: -

 ATAT1 0.967 - - - - 0.967 -

Mlig455_007914 {REF} {Length: 1445} {Pfam: GNAT acetyltransferase, Mec-17 [PF05301.13, score=229.3]; Acetyltransferase (GNAT) domain [PF13508.9, score=20.1]; Acetyltransferase (GNAT) family [PF00583.27, score=19.6]} {Human: ENSG00000229061, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=177, Expect=1e-53]; ENSG00000231257, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=177, Expect=1e-53]; ENSG00000206488, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=177, Expect=1e-53]; ENSG00000234549, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=177, Expect=1e-53]; ENSG00000235658, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=177, Expect=1e-53]; ENSG00000223752, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=177, Expect=1e-53]; ENSG00000137343, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=177, Expect=1e-53]} {Mouse: ENSMUSG00000024426, Atat1, alpha tubulin acetyltransferase 1, [RH, Score=180, Expect=2e-57]} {Dmel: FBgn0035989, CG3967, [Score=140, Expect=1e-40]} {Celegans: WBGene00003178, mec-17, Alpha-tubulin N-acetyltransferase 1, [RH, Score=112, Expect=3e-30]} {Smed: dd_Smed_v6_4913_0_1, dd_Smed_v6_4913_0_1, [Score=194, Expect=1e-60]} {RNA1509_32168} {RNA1310_28025} {RNA815_24152}

Mlig455_008021 {REF} {Length: 1002} {Pfam: GNAT acetyltransferase, Mec-17 [PF05301.13, score=235.8]; Acetyltransferase (GNAT) domain [PF13508.9, score=20.0]; Acetyltransferase (GNAT) family [PF00583.27, score=19.5]} {Human: ENSG00000206488, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=189, Expect=7e-59]; ENSG00000234549, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=189, Expect=7e-59]; ENSG00000235658, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=189, Expect=7e-59]; ENSG00000137343, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=189, Expect=7e-59]; ENSG00000223752, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=189, Expect=7e-59]; ENSG00000229061, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=189, Expect=7e-59]; ENSG00000231257, ATAT1, alpha tubulin acetyltransferase 1, [RH, Score=189, Expect=7e-59]} {Mouse: ENSMUSG00000024426, Atat1, alpha tubulin acetyltransferase 1, [RH, Score=194, Expect=1e-60]} {Dmel: FBgn0035989, CG3967, [RH, Score=149, Expect=5e-44]} {Celegans: WBGene00003178, mec-17, Alpha-tubulin N-acetyltransferase 1, [RH, Score=112, Expect=3e-30]} {Smed: dd_Smed_v6_4913_0_1, dd_Smed_v6_4913_0_1, [RH, Score=208, Expect=8e-66]} {RNA1509_32168} {RNA1310_28025, RNA1509_32168} {RNA1509_32168, RNA815_24152}
13. MligTC455_56879 6 0.12 Mlig455_030320

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_030320 {REF} {Length: 638} {NoTransDecoderORF} {RNA1509_15985} {RNA1310_7023} {RNA815_6936.1}
14. MligTC455_56980 4 0.09 Mlig455_052557

Neo: -

Age: -

 0.967 - - - - 0.967 - Mlig455_052557 {REF} {Length: 120} {NoTransDecoderORF}
15. MligTC455_10213 18 0.38 Mlig455_064700

Neo: -

Age: -

 TYR 0.966 - - - - 0.966 - Mlig455_064700 {REF} {Length: 2321} {Pfam: Common central domain of tyrosinase [PF00264.22, score=106.3]} {Human: ENSG00000077498, TYR, tyrosinase, [Score=197, Expect=7e-57]} {Mouse: ENSMUSG00000004651, Tyr, tyrosinase, [Score=206, Expect=3e-60]} {Celegans: WBGene00016419, tyr-4, TYRosinase, [RH, Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_18243_0_1, dd_Smed_v6_18243_0_1, [Score=230, Expect=3e-70]} {RNA1310_44823} {RNA815_19311}
16. MligTC455_10288 17 0.35 Mlig455_019678

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_019678 {REF} {Length: 1244} {NoTransDecoderORF} {RNA1509_44393} {RNA1310_97891}
17. MligTC455_10547 28 0.59 Mlig455_033470

Neo: -

Age: -

 PBX4 0.966 - - - - 0.966 - Mlig455_033470 {REF} {Length: 2410} {Pfam: Homeodomain [PF00046.31, score=45.7]; Homeobox KN domain [PF05920.13, score=45.3]} {Human: ENSG00000105717, PBX4, PBX homeobox 4, [Score=53.5, Expect=4e-07]; ENSG00000237344, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000206315, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000224952, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000204304, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000232005, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000236353, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000225987, PBX2, PBX homeobox 2, [Score=51.6, Expect=2e-06]; ENSG00000185630, PBX1, PBX homeobox 1, [Score=51.2, Expect=2e-06]} {Mouse: ENSMUSG00000034673, Pbx2, pre B cell leukemia homeobox 2, [Score=51.6, Expect=1e-06]; ENSMUSG00000052534, Pbx1, pre B cell leukemia homeobox 1, [Score=51.2, Expect=1e-06]; ENSMUSG00000100133, Tgif2lx1, TGFB-induced factor homeobox 2-like, X-linked 1, [Score=49.7, Expect=2e-06]; ENSMUSG00000100194, Tgif2lx2, TGFB-induced factor homeobox 2-like, X-linked 2, [Score=49.7, Expect=2e-06]} {Dmel: FBgn0031232, CG11617, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00000461, ceh-40, Homeobox protein ceh-40, [Score=53.5, Expect=1e-07]} {Smed: dd_Smed_v6_7324_0_1, dd_Smed_v6_7324_0_1, [RH, Score=89.0, Expect=4e-19]} {RNA1509_55011} {RNA1310_39435} {RNA815_20886}
18. MligTC455_35365 14 0.29 Mlig455_051974

Neo: -

Age: -

 NPFFR2 0.966 - - - - 0.966 - Mlig455_051974 {REF} {Length: 1412} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=184.8]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=44.6]} {Human: ENSG00000056291, NPFFR2, neuropeptide FF receptor 2, [Score=172, Expect=6e-49]} {Mouse: ENSMUSG00000035528, Npffr2, neuropeptide FF receptor 2, [Score=162, Expect=3e-45]; ENSMUSG00000028778, Hcrtr1, hypocretin (orexin) receptor 1, [Score=155, Expect=7e-43]} {Dmel: FBgn0004842, RYa-R, RYamide receptor, [Score=168, Expect=3e-47]} {Celegans: WBGene00022004, npr-22, NeuroPeptide Receptor family, [RH, Score=157, Expect=9e-44]} {Smed: dd_Smed_v6_15625_0_1, dd_Smed_v6_15625_0_1, [Score=265, Expect=5e-85]} {RNA1310_123208} {RNA815_46307}
19. MligTC455_53098 10 0.2 Mlig455_000210

Neo: -

Age: -

 0.966 - - - - 0.966 - Mlig455_000210 {REF} {Length: 1856} {NoTransDecoderORF} {RNA1509_35494} {RNA1310_44521} {RNA815_38154}
20. MligTC455_17299 538 11.21 Mlig455_036559, Mlig455_057787

Neo: -

Age: -

Region-enriched R2: 5.046/0.00000
Region-enriched R3: 3.527/0.00004

 0.965 - - - - 0.965 -

Mlig455_036559 {REF} {Length: 718} {RNA1509_57277} {RNA1310_52579, RNA1509_57277} {RNA1509_57277, RNA815_26706}

Mlig455_057787 {REF} {Length: 741} {RNA1509_57277} {RNA1310_52579} {RNA815_26706}
21. MligTC455_49769 11 0.23 Mlig455_004340, Mlig455_004350

Neo: -

Age: Up-Down-Down

 ANOS1 0.965 - - - - 0.965 -

Mlig455_004340 {REF} {Length: 3275} {Pfam: Fibronectin type III domain [PF00041.23, score=59.5]} {Human: ENSG00000011201, ANOS1, anosmin 1, [Score=114, Expect=6e-26]} {Dmel: FBgn0039155, Kal1, Kallmann syndrome 1, [RH, Score=83.2, Expect=2e-16]} {Celegans: WBGene00002181, kal-1, KALlmann syndrome homolog, [Score=86.3, Expect=3e-17]} {Smed: dd_Smed_v6_10075_0_1, dd_Smed_v6_10075_0_1, [Score=152, Expect=2e-38]} {RNA1509_44032} {RNA1310_20852} {RNA815_15013}

Mlig455_004350 {REF} {Length: 3028} {Pfam: Fibronectin type III domain [PF00041.23, score=83.9]} {Human: ENSG00000011201, ANOS1, anosmin 1, [Score=126, Expect=1e-29]} {Dmel: FBgn0039155, Kal1, Kallmann syndrome 1, [RH, Score=85.9, Expect=4e-17]} {Celegans: WBGene00002181, kal-1, KALlmann syndrome homolog, [Score=90.1, Expect=2e-18]} {Smed: dd_Smed_v6_10075_0_1, dd_Smed_v6_10075_0_1, [Score=183, Expect=3e-48]} {RNA1509_44032} {RNA1310_20852, RNA1509_44032} {RNA1509_44032, RNA815_15013}
22. MligTC455_00163 6 0.12 Mlig455_060214

Neo: -

Age: -

 0.964 - - - - 0.964 - Mlig455_060214 {REF} {Length: 1746} {Pfam: Pentapeptide repeats (8 copies) [PF00805.24, score=45.4]} {RNA1310_79710.2}
23. MligTC455_06450 18 0.37 Mlig455_002836, Mlig455_002845

Neo: Irradiation

Age: -

 SLC7A1, SLC7A4 0.964 - - - - - 0.964

Mlig455_002836 {REF} {Length: 2434} {TRANSSPLICED} {Pfam: C-terminus of AA_permease [PF13906.8, score=72.9]; Amino acid permease [PF13520.8, score=59.4]; Amino acid permease [PF00324.23, score=54.9]} {Human: ENSG00000139514, SLC7A1, solute carrier family 7 member 1, [Score=232, Expect=1e-69]; ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=232, Expect=2e-69]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=238, Expect=5e-72]; ENSMUSG00000041313, Slc7a1, solute carrier family 7 (cationic amino acid transporter, y+ system), member 1, [Score=233, Expect=5e-70]} {Dmel: FBgn0036984, CG13248, [Score=251, Expect=1e-76]} {Celegans: WBGene00015197, B0454.6, [Score=222, Expect=2e-66]} {Smed: dd_Smed_v6_8652_0_6, dd_Smed_v6_8652_0_6, [Score=156, Expect=2e-42]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629}

Mlig455_002845 {REF} {Length: 1679} {TRANSSPLICED} {Pfam: Amino acid permease [PF13520.8, score=121.0]; Amino acid permease [PF00324.23, score=95.2]} {Human: ENSG00000099960, SLC7A4, solute carrier family 7 member 4, [Score=354, Expect=4e-114]} {Mouse: ENSMUSG00000022756, Slc7a4, solute carrier family 7 (cationic amino acid transporter, y+ system), member 4, [Score=368, Expect=9e-120]} {Dmel: FBgn0036984, CG13248, [Score=386, Expect=1e-126]} {Celegans: WBGene00016806, C50D2.2, [Score=374, Expect=4e-123]} {Smed: dd_Smed_v6_16390_0_1, dd_Smed_v6_16390_0_1, [Score=266, Expect=5e-84]} {RNA1509_22228} {RNA1310_7629} {RNA815_3629}
24. MligTC455_08898 44 0.91 Mlig455_023398, Mlig455_045568

Neo: -

Age: -

 PRR9 0.964 - - - 0.964 - -

Mlig455_023398 {REF} {Length: 1264} {Pfam: Cryptococcal mannosyltransferase 1 [PF11735.10, score=27.2]} {RNA1509_37639} {RNA1310_23440} {RNA815_10032}

Mlig455_045568 {REF} {Length: 8230} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.2, Expect=2e-06]} {RNA1509_37639} {RNA1310_23440, RNA1509_37639} {RNA1509_37639, RNA815_10032}
25. MligTC455_23176 7 0.14 Mlig455_005045

Neo: -

Age: Up-Down-Down

 RILPL1 0.964 - - - - 0.964 - Mlig455_005045 {REF} {Length: 1392} {TRANSSPLICED} {Pfam: JNK_SAPK-associated protein-1 [PF09744.11, score=119.4]} {Human: ENSG00000188026, RILPL1, Rab interacting lysosomal protein like 1, [Score=77.0, Expect=9e-15]} {Mouse: ENSMUSG00000029392, Rilpl1, Rab interacting lysosomal protein-like 1, [Score=84.3, Expect=2e-17]} {Dmel: FBgn0024985, CG11448, [Score=130, Expect=5e-33]} {Celegans: WBGene00007860, rilp-1, RILP (Rab7-Interacting Lysosomal Protein) homolog, [Score=102, Expect=1e-23]} {Smed: dd_Smed_v6_4713_0_1, dd_Smed_v6_4713_0_1, [Score=156, Expect=3e-43]} {RNA1509_18713} {RNA1310_21261.1} {RNA815_18527}
26. MligTC455_01426 3 0.06 Mlig455_006036

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_006036 {REF} {Length: 200} {NoTransDecoderORF}
27. MligTC455_10224 2 0.05 Mlig455_063468

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_063468 {REF} {Length: 103} {NoTransDecoderORF}
28. MligTC455_29458 40 0.83 Mlig455_034031

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_034031 {REF} {Length: 5151} {NoTransDecoderORF} {RNA1509_57562} {RNA1310_13609} {RNA815_5685.1}
29. MligTC455_53582 22 0.46 Mlig455_067135

Neo: -

Age: -

 ZAN 0.963 - - - 0.963 - - Mlig455_067135 {REF} {Length: 2659} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=68.2, Expect=4e-11]} {Mouse: ENSMUSG00000079173, Zan, zonadhesin, [Score=53.1, Expect=1e-06]} {RNA1310_113822} {RNA815_58009}
30. MligTC455_57238 6 0.12 Mlig455_013361

Neo: -

Age: -

 0.963 - - - - 0.963 - Mlig455_013361 {REF} {Length: 367} {Pfam: Zinc knuckle [PF15288.8, score=19.6]}
31. MligTC455_00123 13 0.26 Mlig455_063122

Neo: -

Age: -

 0.962 - - - 0.962 - - Mlig455_063122 {REF} {Length: 625} {NoTransDecoderORF}
32. MligTC455_01810 6 0.13 Mlig455_000616

Neo: -

Age: -

 0.962 - - - 0.962 - - Mlig455_000616 {REF} {Length: 753} {NoTransDecoderORF}
33. MligTC455_14338 31 0.65 Mlig455_041758

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_041758 {REF} {Length: 392} {NoTransDecoderORF}
34. MligTC455_13092 38 0.79 Mlig455_036237

Neo: -

Age: -

Regeneration-downregulated R2: -3.428

Regeneration-depleted R2: -3.428

 0.961 - - - - 0.961 - Mlig455_036237 {REF} {Length: 1392} {Pfam: Concanavalin A-like lectin/glucanases superfamily [PF13385.8, score=28.1]} {RNA1509_41201} {RNA1310_51571} {RNA815_38501}
35. MligTC455_36232 12 0.25 Mlig455_034662

Neo: -

Age: -

 HCK 0.961 - - - - 0.961 - Mlig455_034662 {REF} {Length: 2530} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=285.9]; Protein kinase domain [PF00069.27, score=163.9]; Variant SH3 domain [PF14604.8, score=40.0]; SH3 domain [PF00018.30, score=39.0]; SH2 domain [PF00017.26, score=31.8]; Haspin like kinase domain [PF12330.10, score=26.4]; ABC1 atypical kinase-like domain [PF03109.18, score=23.5]; Variant SH3 domain [PF07653.19, score=18.9]} {Human: ENSG00000101336, HCK, HCK proto-oncogene, Src family tyrosine kinase, [Score=352, Expect=5e-116]; ENSG00000010810, FYN, FYN proto-oncogene, Src family tyrosine kinase, [Score=340, Expect=7e-111]; ENSG00000182866, LCK, LCK proto-oncogene, Src family tyrosine kinase, [Score=340, Expect=3e-111]; ENSG00000176105, YES1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=338, Expect=6e-110]} {Mouse: ENSMUSG00000000409, Lck, lymphocyte protein tyrosine kinase, [Score=343, Expect=3e-112]; ENSMUSG00000019843, Fyn, Fyn proto-oncogene, [Score=340, Expect=6e-111]; ENSMUSG00000014932, Yes1, YES proto-oncogene 1, Src family tyrosine kinase, [Score=340, Expect=6e-111]; ENSMUSG00000003283, Hck, hemopoietic cell kinase, [Score=335, Expect=2e-109]; ENSMUSG00000042228, Lyn, LYN proto-oncogene, Src family tyrosine kinase, [Score=334, Expect=4e-109]} {Dmel: FBgn0264959, Src42A, Src oncogene at 42A, [Score=318, Expect=1e-102]} {Celegans: WBGene00005077, src-1, Tyrosine protein-kinase src-1, [Score=337, Expect=8e-111]} {Smed: dd_Smed_v6_3147_0_1, dd_Smed_v6_3147_0_1, [Score=384, Expect=1e-128]} {RNA1509_12794} {RNA1310_15672} {RNA815_6298}
36. MligTC455_15845 13 0.26 Mlig455_010446

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_010446 {REF} {Length: 1802} {RNA1310_136486} {RNA815_60869}
37. MligTC455_24308 34 0.71 Mlig455_014238

Neo: -

Age: -

 SLC16A12 0.959 - - - - - 0.959 Mlig455_014238 {REF} {Length: 2357} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=95.9]} {Human: ENSG00000152779, SLC16A12, solute carrier family 16 member 12, [Score=160, Expect=2e-43]} {Mouse: ENSMUSG00000009378, Slc16a12, solute carrier family 16 (monocarboxylic acid transporters), member 12, [Score=158, Expect=6e-43]} {Dmel: FBgn0033095, CG3409, [Score=140, Expect=9e-36]} {Celegans: WBGene00003986, mct-4, MonoCarboxylate Transporter family, [Score=114, Expect=3e-27]} {Smed: dd_Smed_v6_9402_0_1, dd_Smed_v6_9402_0_1, [Score=123, Expect=1e-30]} {RNA1509_33089} {RNA1310_9979} {RNA815_15847}
38. MligTC455_38973 9 0.18 Mlig455_040221

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_040221 {REF} {Length: 536} {NoTransDecoderORF} {RNA1310_138048}
39. MligTC455_01851 6 0.13 Mlig455_052894

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_052894 {REF} {Length: 177} {NoTransDecoderORF}
40. MligTC455_06475 3 0.06 Mlig455_013938

Neo: -

Age: -

 ANGPT4 0.958 - - - - 0.958 - Mlig455_013938 {REF} {Length: 1249} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=74.4]} {Human: ENSG00000101280, ANGPT4, angiopoietin 4, [Score=67.8, Expect=2e-12]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=67.8, Expect=8e-13]} {Dmel: FBgn0087011, CG41520, [Score=57.0, Expect=4e-09]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=63.2, Expect=2e-11]} {RNA1509_12513} {RNA1310_75343} {RNA815_14194}
41. MligTC455_24280 13 0.27 Mlig455_050809

Neo: -

Age: logFC(26M/2M)=-0.486

 0.958 - - - - 0.958 - Mlig455_050809 {REF} {Length: 4226} {Smed: dd_Smed_v6_4351_0_1, dd_Smed_v6_4351_0_1, [RH, Score=233, Expect=1e-70]} {RNA1509_37187} {RNA1310_9833.2} {RNA815_9014.1}
42. MligTC455_54436 6 0.13 Mlig455_025459

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_025459 {REF} {Length: 136} {NoTransDecoderORF}
43. MligTC455_07512 15 0.3 Mlig455_049171

Neo: -

Age: Down-Up-Up

 GRIA1 0.956 - - - - 0.956 - Mlig455_049171 {REF} {Length: 3290} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=124.7]; Ligand-gated ion channel [PF00060.28, score=121.8]; Receptor family ligand binding region [PF01094.30, score=86.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=66.8]} {Human: ENSG00000155511, GRIA1, glutamate ionotropic receptor AMPA type subunit 1, [Score=446, Expect=9e-142]; ENSG00000120251, GRIA2, glutamate ionotropic receptor AMPA type subunit 2, [Score=432, Expect=2e-136]; ENSG00000152578, GRIA4, glutamate ionotropic receptor AMPA type subunit 4, [Score=431, Expect=8e-136]} {Mouse: ENSMUSG00000020524, Gria1, glutamate receptor, ionotropic, AMPA1 (alpha 1), [Score=446, Expect=5e-142]; ENSMUSG00000025892, Gria4, glutamate receptor, ionotropic, AMPA4 (alpha 4), [Score=432, Expect=1e-136]; ENSMUSG00000033981, Gria2, glutamate receptor, ionotropic, AMPA2 (alpha 2), [Score=427, Expect=7e-135]} {Dmel: FBgn0038837, CG3822, [Score=392, Expect=4e-122]} {Celegans: WBGene00001612, glr-1, Glutamate receptor 1, [Score=352, Expect=4e-106]} {Smed: dd_Smed_v6_7562_0_1, dd_Smed_v6_7562_0_1, [Score=554, Expect=0.0]} {RNA1509_56139} {RNA1310_34593} {RNA815_47410}
44. MligTC455_20074 13 0.27 Mlig455_011172

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_011172 {REF} {Length: 985} {RNA1509_20643} {RNA1310_11450} {RNA815_1024}
45. MligTC455_57571 14 0.29 Mlig455_047044

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_047044 {REF} {Length: 215} {NoTransDecoderORF}
46. MligTC455_01840 5 0.11 Mlig455_024352

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_024352 {REF} {Length: 1208} {RNA1310_98047}
47. MligTC455_07206 105 2.19 Mlig455_032806

Neo: -

Age: -

 0.954 - - - - 0.954 - Mlig455_032806 {REF} {Length: 618} {NoTransDecoderORF} {RNA1310_136285}
48. MligTC455_10886 28 0.58 Mlig455_046889

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_046889 {REF} {Length: 1896} {NoTransDecoderORF}
49. MligTC455_46462 7 0.15 Mlig455_025120

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_025120 {REF} {Length: 1291}
50. MligTC455_50329 62 1.28 Mlig455_021856, Mlig455_021933

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_021856 {REF} {Length: 1659} {NoTransDecoderORF} {RNA1310_38830} {RNA815_11698.1}

Mlig455_021933 {REF} {Length: 850} {NoTransDecoderORF} {RNA1310_41987.1} {RNA815_11698.1}
51. MligTC455_09582 3 0.07 Mlig455_013802

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_013802 {REF} {Length: 199} {NoTransDecoderORF}
52. MligTC455_26693 7 0.14 Mlig455_061183

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_061183 {REF} {Length: 1162} {RNA1509_53635} {RNA1310_63797} {RNA815_50298}
53. MligTC455_35458 11 0.23 Mlig455_062700

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_062700 {REF} {Length: 596} {NoTransDecoderORF} {RNA1310_89899} {RNA815_46908}
54. MligTC455_33897 22 0.46 Mlig455_032581, Mlig455_032644

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.624

 RBPJ 0.951 - - - - 0.951 -

Mlig455_032581 {REF} {Length: 3237} {Pfam: Beta-trefoil DNA-binding domain [PF09270.12, score=170.9]; LAG1, DNA binding [PF09271.13, score=154.7]; TIG domain [PF20144.1, score=92.5]} {Human: ENSG00000168214, RBPJ, recombination signal binding protein for immunoglobulin kappa J region, [Score=588, Expect=0.0]} {Mouse: ENSMUSG00000039191, Rbpj, recombination signal binding protein for immunoglobulin kappa J region, [Score=586, Expect=0.0]} {Dmel: FBgn0004837, Su(H), Suppressor of Hairless, [Score=591, Expect=0.0]} {Celegans: WBGene00002245, lag-1, DNA-binding protein LAG-1; Lag-1 protein; Lin-12 And Glp-1 phenotype, [RH, Score=455, Expect=1e-152]} {Smed: dd_Smed_v6_6047_0_1, dd_Smed_v6_6047_0_1, [Score=574, Expect=0.0]} {RNA1509_13138} {RNA1310_44533} {RNA815_22311}

Mlig455_032644 {REF} {Length: 2931} {Pfam: Beta-trefoil DNA-binding domain [PF09270.12, score=170.9]; LAG1, DNA binding [PF09271.13, score=154.7]; TIG domain [PF20144.1, score=92.5]} {Human: ENSG00000168214, RBPJ, recombination signal binding protein for immunoglobulin kappa J region, [Score=588, Expect=0.0]} {Mouse: ENSMUSG00000039191, Rbpj, recombination signal binding protein for immunoglobulin kappa J region, [Score=585, Expect=0.0]} {Dmel: FBgn0004837, Su(H), Suppressor of Hairless, [Score=590, Expect=0.0]} {Celegans: WBGene00002245, lag-1, DNA-binding protein LAG-1; Lag-1 protein; Lin-12 And Glp-1 phenotype, [RH, Score=455, Expect=2e-152]} {Smed: dd_Smed_v6_6047_0_1, dd_Smed_v6_6047_0_1, [Score=574, Expect=0.0]} {RNA1509_52367} {RNA1310_44533} {RNA815_59613}
55. MligTC455_47697 23 0.48 Mlig455_025363

Neo: -

Age: -

 ADRA2A 0.951 - - - - 0.951 - Mlig455_025363 {REF} {Length: 1667} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=263.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=33.1]; Olfactory receptor [PF13853.8, score=25.9]} {Human: ENSG00000150594, ADRA2A, adrenoceptor alpha 2A, [Score=268, Expect=1e-85]; ENSG00000178394, HTR1A, 5-hydroxytryptamine receptor 1A, [Score=260, Expect=5e-83]} {Mouse: ENSMUSG00000033717, Adra2a, adrenergic receptor, alpha 2a, [Score=275, Expect=1e-88]} {Dmel: FBgn0038653, CG18208, [Score=221, Expect=4e-66]} {Celegans: WBGene00006411, octr-1, OCTopamine Receptor (GPCR), [Score=269, Expect=3e-87]} {Smed: dd_Smed_v6_48706_0_1, dd_Smed_v6_48706_0_1, [RH, Score=322, Expect=4e-108]} {RNA1310_113575}
56. MligTC455_14793 8 0.16 Mlig455_016259

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_016259 {REF} {Length: 2544} {RNA1310_68010}
57. MligTC455_52486 26 0.55 Mlig455_064865

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_064865 {REF} {Length: 266} {NoTransDecoderORF} {RNA1310_16242} {RNA815_45500}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA