Data search
Results for MligTC455_06622
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_06622 | 237 | 4.93 | Mlig455_019704 | Neo: Irradiation Age: - |
EXOSC1 | Mlig455_019704 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Exosome component EXOSC1/CSL4 [PF10447.11, score=52.1]; Exosome complex exonuclease RRP4 N-terminal region [PF14382.8, score=30.7]} {Human: ENSG00000171311, EXOSC1, exosome component 1, [RH, Score=134, Expect=1e-38]} {Mouse: ENSMUSG00000034321, Exosc1, exosome component 1, [RH, Score=133, Expect=2e-38]} {Dmel: FBgn0032346, Csl4, [RH, Score=124, Expect=3e-35]} {RNA1509_22181} {RNA1310_22888} {RNA815_20642} |
Cumulative graph for MligTC455_06622
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.402 | 2.774 | 0.32958 | 0.97627 | |
| RegionR2 | 1.226 | 2.774 | 0.09344 | 0.37514 | |
| RegionR3 | 0.164 | 2.774 | 0.73288 | 1.00000 | |
| RegionR4 | -1.491 | 2.774 | 0.02871 | 0.13171 | |
| RegionR5 | 0.667 | 2.774 | 0.12004 | 0.34657 | |
| RegionR6 | -0.083 | 2.774 | 0.88326 | 1.00000 | |
| RegionR7 | -0.015 | 2.774 | 0.98906 | 1.00000 | |
| RegionR8 | 0.932 | 2.774 | 0.23948 | 0.85593 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -2.821 | 2.774 | 0.65658 | 1.00000 | |
| RegenerationR2 | 0.559 | 2.774 | 0.36588 | 0.79276 | |
| RegenerationR3 | 0.366 | 2.774 | 0.59831 | 0.90747 | |
| RegenerationR4 | 0.537 | 2.774 | 0.45324 | 0.84380 | |
| RegenerationR5 | 0.117 | 2.774 | 0.80111 | 0.98891 | |
| RegenerationR6 | 1.323 | 2.774 | 0.06827 | 0.32771 | |
| RegenerationBL | -0.323 | 2.774 | 0.79256 | 1.00000 | |
| RegenerationTP | 0.948 | 2.774 | 0.25718 | 0.70479 |
Genes with expression patterns similar to MligTC455_06622
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_06622 | 237 | 4.93 | Mlig455_019704 | Neo: Irradiation Age: - |
EXOSC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019704 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Exosome component EXOSC1/CSL4 [PF10447.11, score=52.1]; Exosome complex exonuclease RRP4 N-terminal region [PF14382.8, score=30.7]} {Human: ENSG00000171311, EXOSC1, exosome component 1, [RH, Score=134, Expect=1e-38]} {Mouse: ENSMUSG00000034321, Exosc1, exosome component 1, [RH, Score=133, Expect=2e-38]} {Dmel: FBgn0032346, Csl4, [RH, Score=124, Expect=3e-35]} {RNA1509_22181} {RNA1310_22888} {RNA815_20642} |
| 2. | MligTC455_49261 | 315 | 6.56 | Mlig455_007171 | Neo: - Age: - |
TTC39B | 1.737 | - | - | 0.779 | 0.958 | - | - | Mlig455_007171 {REF} {Length: 3232} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3808) [PF10300.11, score=336.7]; Tetratricopeptide repeat [PF13424.8, score=19.4]} {Human: ENSG00000155158, TTC39B, tetratricopeptide repeat domain 39B, [Score=362, Expect=6e-116]; ENSG00000085831, TTC39A, tetratricopeptide repeat domain 39A, [Score=351, Expect=4e-113]} {Mouse: ENSMUSG00000038172, Ttc39b, tetratricopeptide repeat domain 39B, [Score=373, Expect=3e-121]; ENSMUSG00000028555, Ttc39a, tetratricopeptide repeat domain 39A, [Score=365, Expect=2e-118]} {Celegans: WBGene00016314, C32D5.6, [Score=299, Expect=3e-93]} {Smed: dd_Smed_v6_6902_0_1, dd_Smed_v6_6902_0_1, [Score=366, Expect=2e-118]} {RNA1509_49095} {RNA1310_26487.1} {RNA815_23012} |
| 3. | MligTC455_46973 | 77 | 1.6 | Mlig455_056644 | Neo: - Age: - |
CNOT3 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_056644 {REF} {Length: 1023} {Pfam: Not1 N-terminal domain, CCR4-Not complex component [PF04065.17, score=231.2]} {Human: ENSG00000088038, CNOT3, CCR4-NOT transcription complex subunit 3, [RH, Score=194, Expect=3e-62]} {Mouse: ENSMUSG00000035632, Cnot3, CCR4-NOT transcription complex, subunit 3, [Score=201, Expect=8e-60]} {Dmel: FBgn0033029, Not3, CCR4-NOT transcription complex subunit 3, [Score=216, Expect=5e-65]} {Celegans: WBGene00003826, ntl-3, NOT-Like (Yeast CCR4/NOT complex component), [Score=155, Expect=2e-43]} {Smed: dd_Smed_v6_5044_0_1, dd_Smed_v6_5044_0_1, [Score=204, Expect=2e-61]} {RNA1509_33173} {RNA1310_29103.1} {RNA815_11164} |
| 4. | MligTC455_15277 | 106 | 2.2 | Mlig455_011500 | Neo: - Age: Up-Down-Up |
0.964 | - | - | - | 0.964 | - | - | Mlig455_011500 {REF} {Length: 4662} {RNA1509_54224} {RNA1310_34870} {RNA815_36274} | |
| 5. | MligTC455_47346 | 144 | 3.01 | Mlig455_054231 | Neo: - Age: Up-Down-Up |
0.964 | - | - | - | - | - | 0.964 | Mlig455_054231 {REF} {Length: 1363} {NoTransDecoderORF} {RNA1509_53154} {RNA1310_30331, RNA1509_53154} {RNA1509_53154, RNA815_19620} | |
| 6. | MligTC455_44097 | 1256 | 26.16 | Mlig455_059832 | Neo: - Age: Down-Up-Up |
FAM32A | 0.962 | - | - | - | 0.962 | - | - | Mlig455_059832 {REF} {Length: 924} {TRANSSPLICED} {Pfam: FAM32A [PF08555.12, score=21.8]} {Human: ENSG00000105058, FAM32A, family with sequence similarity 32 member A, [RH, Score=66.6, Expect=1e-14]} {Mouse: ENSMUSG00000003039, Fam32a, family with sequence similarity 32, member A, [RH, Score=66.2, Expect=1e-14]} {Dmel: FBgn0031603, CG15432, [RH, Score=52.4, Expect=2e-09]} {Celegans: WBGene00010479, K01G5.8, [RH, Score=51.6, Expect=2e-09]} {Smed: dd_Smed_v6_1341_0_1, dd_Smed_v6_1341_0_1, [RH, Score=56.2, Expect=4e-11]} {RNA1509_10534, RNA1509_15993, RNA1509_22534, RNA1509_28560, RNA1509_47971, RNA1509_60094} {RNA1310_74104, RNA1509_10534, RNA1509_15993, RNA1509_22534, RNA1509_28560, RNA1509_47971, RNA1509_60094} {RNA1509_10534, RNA1509_15993, RNA1509_22534, RNA1509_28560, RNA1509_47971, RNA1509_60094, RNA815_27195} |
| 7. | MligTC455_29277 | 386 | 8.05 | Mlig455_061649 | Neo: - Age: logFC(26M/2M)=0.559 |
CYP3A7-CYP3A51P | 0.96 | - | - | - | - | - | 0.960 | Mlig455_061649 {REF} {Length: 3908} {Pfam: Cytochrome P450 [PF00067.24, score=300.3]} {Human: ENSG00000282301, CYP3A7-CYP3A51P, CYP3A7-CYP3A51P readthrough, [Score=268, Expect=5e-83]; ENSG00000160870, CYP3A7, cytochrome P450 family 3 subfamily A member 7, [Score=268, Expect=1e-83]; ENSG00000021461, CYP3A43, cytochrome P450 family 3 subfamily A member 43, [Score=261, Expect=1e-80]; ENSG00000160868, CYP3A4, cytochrome P450 family 3 subfamily A member 4, [Score=258, Expect=9e-80]} {Mouse: ENSMUSG00000029727, Cyp3a13, cytochrome P450, family 3, subfamily a, polypeptide 13, [Score=265, Expect=2e-82]; ENSMUSG00000056035, Cyp3a11, cytochrome P450, family 3, subfamily a, polypeptide 11, [Score=254, Expect=3e-78]; ENSMUSG00000029630, Cyp3a25, cytochrome P450, family 3, subfamily a, polypeptide 25, [Score=253, Expect=8e-78]; ENSMUSG00000075551, Cyp3a41a, cytochrome P450, family 3, subfamily a, polypeptide 41A, [Score=252, Expect=2e-77]; ENSMUSG00000075552, Cyp3a41b, cytochrome P450, family 3, subfamily a, polypeptide 41B, [Score=252, Expect=2e-77]; ENSMUSG00000061292, Cyp3a59, cytochrome P450, family 3, subfamily a, polypeptide 59, [Score=252, Expect=2e-77]} {Dmel: FBgn0013772, Cyp6a8, Cytochrome P450-6a8, [RH, Score=224, Expect=9e-67]} {Celegans: WBGene00011676, cyp-13A2, Putative cytochrome P450 CYP13A2, [Score=207, Expect=1e-60]} {Smed: dd_Smed_v6_4319_0_1, dd_Smed_v6_4319_0_1, [Score=305, Expect=4e-98]} {RNA1509_21289, RNA1509_23611, RNA1509_42440, RNA1509_4674} {RNA1310_15246, RNA1509_21289, RNA1509_23611, RNA1509_42440} {RNA1509_21289, RNA1509_23611, RNA1509_42440, RNA815_7045} |
| 8. | MligTC455_44755 | 109 | 2.27 | Mlig455_041876 | Neo: - Age: Up-Up-Down |
0.957 | - | - | 0.957 | - | - | - | Mlig455_041876 {REF} {Length: 3281} {Pfam: DIX domain [PF00778.19, score=38.2]} {RNA1509_33037} {RNA1310_8807} {RNA815_3860} | |
| 9. | MligTC455_22454 | 296 | 6.17 | Mlig455_017563 | Neo: - Age: - |
0.952 | - | - | 0.952 | - | - | - | Mlig455_017563 {REF} {Length: 240} {NoTransDecoderORF} {RNA1509_30882, RNA1509_48743} {RNA1310_97726, RNA1509_30882, RNA1509_48743} {RNA1509_30882, RNA1509_48743, RNA815_50723} | |
| 10. | MligTC455_46762 | 101 | 2.11 | Mlig455_014615 | Neo: - Age: - |
PANK4 | 0.95 | - | - | - | - | - | 0.950 | Mlig455_014615 {REF} {Length: 3653} {Pfam: Fumble [PF03630.16, score=86.8]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=67.8, Expect=1e-11]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=67.8, Expect=1e-11]} {Mouse: ENSMUSG00000018846, Pank3, pantothenate kinase 3, [Score=53.1, Expect=2e-07]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=57.0, Expect=9e-09]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=117, Expect=1e-29]} {RNA1509_52856} {RNA1310_25103, RNA1509_52856} {RNA1509_52856, RNA815_12785.1} |
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