Data search
Results for MligTC455_22454
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_22454 | 296 | 6.17 | Mlig455_017563 | Neo: - Age: - |
Mlig455_017563 {REF} {Length: 240} {NoTransDecoderORF} {RNA1509_30882, RNA1509_48743} {RNA1310_97726, RNA1509_30882, RNA1509_48743} {RNA1509_30882, RNA1509_48743, RNA815_50723} |
Cumulative graph for MligTC455_22454
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.221 | 3.114 | 0.28182 | 0.93236 | |
| RegionR2 | 1.456 | 3.114 | 0.02437 | 0.17407 | |
| RegionR3 | 0.616 | 3.114 | 0.15863 | 0.67426 | |
| RegionR4 | -1.669 | 3.114 | 0.00420 | 0.03178 | |
| RegionR5 | 0.154 | 3.114 | 0.71620 | 1.00000 | |
| RegionR6 | 0.385 | 3.114 | 0.41711 | 0.98523 | |
| RegionR7 | 0.468 | 3.114 | 0.46275 | 1.00000 | |
| RegionR8 | -0.188 | 3.114 | 0.85833 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.45 | 3.114 | 0.57512 | 1.00000 | |
| RegenerationR2 | 0.136 | 3.114 | 0.82130 | 0.99544 | |
| RegenerationR3 | 0.02 | 3.114 | 0.96119 | 1.00000 | |
| RegenerationR4 | 0.679 | 3.114 | 0.26647 | 0.71379 | |
| RegenerationR5 | 0.249 | 3.114 | 0.59917 | 0.90972 | |
| RegenerationR6 | -0.145 | 3.114 | 0.84116 | 0.99633 | |
| RegenerationBL | 1.042 | 3.114 | 0.21661 | 0.56274 | |
| RegenerationTP | 1.129 | 3.114 | 0.18946 | 0.62775 |
Genes with expression patterns similar to MligTC455_22454
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_22454 | 296 | 6.17 | Mlig455_017563 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_017563 {REF} {Length: 240} {NoTransDecoderORF} {RNA1509_30882, RNA1509_48743} {RNA1310_97726, RNA1509_30882, RNA1509_48743} {RNA1509_30882, RNA1509_48743, RNA815_50723} | |
| 2. | MligTC455_22455 | 296 | 6.16 | Mlig455_026860 | Neo: - Age: - |
MRPL24 | 5.98 | 0.999 | 1.000 | 0.982 | 1.000 | 1.000 | 0.999 | Mlig455_026860 {REF} {Length: 1546} {Pfam: Ribosomal proteins 50S L24/mitochondrial 39S L24 [PF17136.6, score=19.7]} {Human: ENSG00000143314, MRPL24, mitochondrial ribosomal protein L24, [RH, Score=79.3, Expect=5e-17]} {Mouse: ENSMUSG00000019710, Mrpl24, mitochondrial ribosomal protein L24, [RH, Score=76.6, Expect=3e-16]} {Dmel: FBgn0031651, mRpL24, mitochondrial ribosomal protein L24, [RH, Score=76.6, Expect=4e-16]} {Celegans: WBGene00019076, mrpl-24, Probable 39S ribosomal protein L24, mitochondrial, [RH, Score=86.3, Expect=2e-19]} {Smed: dd_Smed_v6_1638_0_1, dd_Smed_v6_1638_0_1, [RH, Score=144, Expect=9e-42]} {RNA1509_10359, RNA1509_38993} {RNA1310_35496, RNA1509_10359, RNA1509_38993} {RNA1509_10359, RNA1509_38993, RNA815_15939} |
| 3. | MligTC455_06622 | 237 | 4.93 | Mlig455_019704 | Neo: Irradiation Age: - |
EXOSC1 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_019704 {REF} {Length: 1166} {TRANSSPLICED} {Pfam: Exosome component EXOSC1/CSL4 [PF10447.11, score=52.1]; Exosome complex exonuclease RRP4 N-terminal region [PF14382.8, score=30.7]} {Human: ENSG00000171311, EXOSC1, exosome component 1, [RH, Score=134, Expect=1e-38]} {Mouse: ENSMUSG00000034321, Exosc1, exosome component 1, [RH, Score=133, Expect=2e-38]} {Dmel: FBgn0032346, Csl4, [RH, Score=124, Expect=3e-35]} {RNA1509_22181} {RNA1310_22888} {RNA815_20642} |
| 4. | MligTC455_26712 | 375 | 7.82 | Mlig455_031611 | Neo: Int S/G2/M Age: - |
PNLDC1 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_031611 {REF} {Length: 3355} {TRANSSPLICED} {Pfam: CAF1 family ribonuclease [PF04857.22, score=211.9]} {Human: ENSG00000146453, PNLDC1, PARN like, ribonuclease domain containing 1, [RH, Score=184, Expect=1e-50]} {Mouse: ENSMUSG00000073460, Pnldc1, poly(A)-specific ribonuclease (PARN)-like domain containing 1, [RH, Score=188, Expect=4e-52]} {Celegans: WBGene00010734, parn-1, 3'-5' exoribonuclease parn-1, [RH, Score=86.7, Expect=1e-17]} {Smed: dd_Smed_v6_7361_0_1, dd_Smed_v6_7361_0_1, [RH, Score=174, Expect=7e-47]} {RNA1509_21738} {RNA1310_4936.1, RNA1509_21738} {RNA1509_21738, RNA815_10185} |
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