Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_06993 | 16 | 0.33 | Mlig455_000978 | Neo: - Age: - |
Mlig455_000978 {REF} {Length: 563} {NoTransDecoderORF} {RNA1310_138579} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | - | - | - | - | |
RegionR2 | - | - | - | - | |
RegionR3 | - | - | - | - | |
RegionR4 | - | - | - | - | |
RegionR5 | - | - | - | - | |
RegionR6 | - | - | - | - | |
RegionR7 | - | - | - | - | |
RegionR8 | - | - | - | - |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | - | - | - | - | |
RegenerationR2 | - | - | - | - | |
RegenerationR3 | - | - | - | - | |
RegenerationR4 | - | - | - | - | |
RegenerationR5 | - | - | - | - | |
RegenerationR6 | - | - | - | - | |
RegenerationBL | - | - | - | - | |
RegenerationTP | - | - | - | - |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_06993 | 16 | 0.33 | Mlig455_000978 | Neo: - Age: - |
1 | - | - | - | - | 1.000 | - | Mlig455_000978 {REF} {Length: 563} {NoTransDecoderORF} {RNA1310_138579} | |
2. | MligTC455_01857 | 31 | 0.64 | Mlig455_038561, Mlig455_052195 | Neo: Germline Age: - |
0.985 | - | - | - | - | 0.985 | - | Mlig455_038561 {REF} {Length: 1042} Mlig455_052195 {REF} {Length: 1042} |
|
3. | MligTC455_30484 | 46 | 0.95 | Mlig455_052929 | Neo: - Age: - |
NEUROD1 | 0.982 | - | - | - | - | 0.982 | - | Mlig455_052929 {REF} {Length: 1472} {Pfam: Neuronal helix-loop-helix transcription factor [PF12533.10, score=60.6]; Helix-loop-helix DNA-binding domain [PF00010.28, score=57.4]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [RH, Score=157, Expect=7e-45]; ENSG00000164600, NEUROD6, neuronal differentiation 6, [RH, Score=154, Expect=3e-44]} {Mouse: ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [RH, Score=155, Expect=2e-44]; ENSMUSG00000037984, Neurod6, neurogenic differentiation 6, [RH, Score=151, Expect=3e-43]} {Dmel: FBgn0010433, ato, atonal, [RH, Score=84.7, Expect=1e-18]} {Celegans: WBGene00000561, cnd-1, Neurogenic differentiation factor 1, [RH, Score=137, Expect=2e-39]} {Smed: dd_Smed_v6_21717_0_1, dd_Smed_v6_21717_0_1, [RH, Score=140, Expect=2e-40]} {RNA1310_55204} {RNA815_40310} |
4. | MligTC455_13862 | 174 | 3.62 | Mlig455_034030 | Neo: - Age: - |
SOX11 | 0.98 | - | - | - | - | 0.980 | - | Mlig455_034030 {REF} {Length: 2069} {Pfam: HMG (high mobility group) box [PF00505.21, score=64.8]; HMG-box domain [PF09011.12, score=24.3]} {Human: ENSG00000176887, SOX11, SRY-box 11, [Score=102, Expect=1e-24]; ENSG00000164736, SOX17, SRY-box 17, [Score=102, Expect=2e-24]; ENSG00000171056, SOX7, SRY-box 7, [Score=101, Expect=2e-24]; ENSG00000203883, SOX18, SRY-box 18, [Score=101, Expect=3e-24]; ENSG00000285438, SOX7, SRY-box 7, [Score=101, Expect=2e-24]; ENSG00000125398, SOX9, SRY-box 9, [Score=101, Expect=5e-24]; ENSG00000143842, SOX13, SRY-box 13, [Score=100, Expect=2e-23]; ENSG00000005513, SOX8, SRY-box 8, [Score=100, Expect=8e-24]; ENSG00000100146, SOX10, SRY-box 10, [Score=99.4, Expect=2e-23]; ENSG00000110693, SOX6, SRY-box 6, [Score=98.2, Expect=1e-22]; ENSG00000124766, SOX4, SRY-box 4, [Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [Score=107, Expect=1e-28]; ENSMUSG00000063060, Sox7, SRY (sex determining region Y)-box 7, [Score=104, Expect=2e-25]; ENSMUSG00000063632, Sox11, SRY (sex determining region Y)-box 11, [Score=102, Expect=6e-25]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=111, Expect=2e-27]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [Score=99.8, Expect=2e-24]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=94.4, Expect=2e-22]} {RNA1310_58968} {RNA815_59621} |
5. | MligTC455_32684 | 420 | 8.75 | Mlig455_044350 | Neo: - Age: - Regeneration-upregulated BL: 2.960 Regeneration-enriched BL: 2.960 |
ADAM9 | 0.979 | - | - | - | - | 0.979 | - | Mlig455_044350 {REF} {Length: 7296} {Pfam: Disintegrin [PF00200.25, score=49.8]; Reprolysin family propeptide [PF01562.21, score=41.8]; ADAM cysteine-rich [PF08516.14, score=21.5]; EGF-like domain [PF07974.15, score=19.9]} {Human: ENSG00000168615, ADAM9, ADAM metallopeptidase domain 9, [Score=143, Expect=2e-34]; ENSG00000197140, ADAM32, ADAM metallopeptidase domain 32, [Score=142, Expect=4e-34]; ENSG00000275594, ADAM32, ADAM metallopeptidase domain 32, [Score=141, Expect=1e-33]; ENSG00000073670, ADAM11, ADAM metallopeptidase domain 11, [Score=138, Expect=9e-33]; ENSG00000151651, ADAM8, ADAM metallopeptidase domain 8, [Score=136, Expect=2e-32]} {Mouse: ENSMUSG00000031555, Adam9, a disintegrin and metallopeptidase domain 9 (meltrin gamma), [Score=152, Expect=3e-37]} {Dmel: FBgn0259110, mmd, mind-meld, [Score=139, Expect=6e-33]} {Celegans: WBGene00006804, unc-71, ADM-1 preproprotein, [Score=155, Expect=2e-38]} {Smed: dd_Smed_v6_8718_0_1, dd_Smed_v6_8718_0_1, [Score=239, Expect=1e-64]} {RNA1509_16811} {RNA1310_5982, RNA1509_16811} {RNA1509_16811, RNA815_16761} |
6. | MligTC455_50909 | 122 | 2.54 | Mlig455_046070, Mlig455_046077 | Neo: - Age: - |
0.977 | - | - | - | - | 0.977 | - | Mlig455_046070 {REF} {Length: 923} {TRANSSPLICED} {RNA1509_43265} {RNA1310_50592, RNA1509_43265} {RNA1509_43265, RNA815_29810.1} Mlig455_046077 {REF} {Length: 916} {TRANSSPLICED} {RNA1509_43265} {RNA1310_50592} {RNA815_29810.1} |
|
7. | MligTC455_09554 | 41 | 0.85 | Mlig455_038807 | Neo: - Age: - |
0.976 | - | - | - | - | 0.976 | - | Mlig455_038807 {REF} {Length: 594} {NoTransDecoderORF} {RNA1310_117051} | |
8. | MligTC455_11628 | 16 | 0.33 | Mlig455_002358 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_002358 {REF} {Length: 535} {NoTransDecoderORF} {RNA1310_80197} | |
9. | MligTC455_20164 | 49 | 1.02 | Mlig455_049842 | Neo: - Age: Up-Down-Up |
TEDC1 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_049842 {REF} {Length: 2341} {TRANSSPLICED} {Pfam: Tubulin epsilon and delta complex protein 1 [PF14970.8, score=140.2]} {Human: ENSG00000185347, TEDC1, tubulin epsilon and delta complex 1, [Score=77.8, Expect=6e-15]} {Mouse: ENSMUSG00000037466, Tedc1, tubulin epsilon and delta complex 1, [Score=59.3, Expect=4e-09]} {Smed: dd_Smed_v6_15829_0_1, dd_Smed_v6_15829_0_1, [Score=69.3, Expect=9e-13]} {RNA1509_27695} {RNA1310_8427.1} {RNA815_8179.1} |
10. | MligTC455_21879 | 987 | 20.57 | Mlig455_028749 | Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.988 Region-enriched R4: 2.660/0.01053 |
TRPM1 | 0.965 | - | - | - | - | 0.965 | - | Mlig455_028749 {REF} {Length: 5114} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=44.7]; Ankyrin repeats (many copies) [PF13857.8, score=36.6]; Ankyrin repeats (many copies) [PF13637.8, score=36.5]; Ion transport protein [PF00520.33, score=36.3]; Ankyrin repeat [PF13606.8, score=26.5]; Ankyrin repeat [PF00023.32, score=25.9]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=71.6, Expect=1e-11]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=71.6, Expect=1e-11]; ENSG00000092439, TRPM7, transient receptor potential cation channel subfamily M member 7, [Score=70.5, Expect=2e-11]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=72.8, Expect=3e-12]; ENSMUSG00000027365, Trpm7, transient receptor potential cation channel, subfamily M, member 7, [Score=72.0, Expect=5e-12]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=58.2, Expect=6e-08]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=71.2, Expect=5e-12]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=90.9, Expect=3e-18]} {RNA1509_7199} {RNA1310_2316} {RNA815_581} |
11. | MligTC455_10885 | 8 | 0.17 | Mlig455_069452 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_069452 {REF} {Length: 405} {NoTransDecoderORF} | |
12. | MligTC455_21716 | 16 | 0.34 | Mlig455_010621 | Neo: - Age: - |
0.962 | - | - | - | - | 0.962 | - | Mlig455_010621 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1310_115082} | |
13. | MligTC455_48954 | 316 | 6.59 | Mlig455_000336, Mlig455_067936 | Neo: - Age: - Region-enriched R8: 6.016/0.00000 |
WNT2 | 0.962 | - | - | - | - | 0.962 | - | Mlig455_000336 {REF} {Length: 2268} {Pfam: wnt family [PF00110.21, score=150.7]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=94.4, Expect=1e-20]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.8, Expect=3e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=95.1, Expect=4e-21]; ENSMUSG00000036856, Wnt4, wingless-type MMTV integration site family, member 4, [Score=93.2, Expect=2e-20]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=95.5, Expect=2e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=137, Expect=4e-36]} {RNA1509_39977} {RNA1310_11459, RNA1509_39977} {RNA1509_39977, RNA815_18855} Mlig455_067936 {REF} {Length: 2361} {Pfam: wnt family [PF00110.21, score=149.2]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=96.7, Expect=2e-21]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.0, Expect=6e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=97.4, Expect=7e-22]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=96.3, Expect=1e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=133, Expect=7e-35]} {RNA1509_39977} {RNA1310_11459} {RNA815_18855} |
14. | MligTC455_49260 | 767 | 15.98 | Mlig455_027373, Mlig455_069826 | Neo: Int S/G2/M Age: - Regeneration-upregulated BL: 2.094 Regeneration-enriched BL: 2.094 |
MRPL2 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_027373 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=54.2]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=23.2]} {Human: ENSG00000112651, MRPL2, mitochondrial ribosomal protein L2, [RH, Score=109, Expect=5e-27]} {Mouse: ENSMUSG00000002767, Mrpl2, mitochondrial ribosomal protein L2, [RH, Score=113, Expect=1e-28]} {Dmel: FBgn0036135, mRpL2, mitochondrial ribosomal protein L2, [RH, Score=128, Expect=2e-34]} {Celegans: WBGene00018932, mrpl-2, Mitochondrial Ribosomal Protein, Large, [RH, Score=103, Expect=3e-25]} {Smed: dd_Smed_v6_2712_3_1, dd_Smed_v6_2712_3_1, [RH, Score=191, Expect=3e-58]} {RNA1509_24598, RNA1509_25714} {RNA1310_26184.2, RNA1509_24598, RNA1509_25714} {RNA1509_24598, RNA1509_25714, RNA815_13085} Mlig455_069826 {REF} {Length: 2600} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=54.2]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=23.2]} {Human: ENSG00000112651, MRPL2, mitochondrial ribosomal protein L2, [RH, Score=109, Expect=5e-27]} {Mouse: ENSMUSG00000002767, Mrpl2, mitochondrial ribosomal protein L2, [RH, Score=113, Expect=1e-28]} {Dmel: FBgn0036135, mRpL2, mitochondrial ribosomal protein L2, [RH, Score=128, Expect=2e-34]} {Celegans: WBGene00018932, mrpl-2, Mitochondrial Ribosomal Protein, Large, [RH, Score=103, Expect=3e-25]} {Smed: dd_Smed_v6_2712_3_1, dd_Smed_v6_2712_3_1, [RH, Score=191, Expect=3e-58]} {RNA1509_24598, RNA1509_47147, RNA1509_49769} {RNA1310_26184.2, RNA1509_47147, RNA1509_49769} {RNA1509_47147, RNA1509_49769, RNA815_13085} |