Data search


search
Exact
Search

Results for MligTC455_50909

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_50909 122 2.54 Mlig455_046070, Mlig455_046077

Neo: -

Age: -

Mlig455_046070 {REF} {Length: 923} {TRANSSPLICED} {RNA1509_43265} {RNA1310_50592, RNA1509_43265} {RNA1509_43265, RNA815_29810.1}

Mlig455_046077 {REF} {Length: 916} {TRANSSPLICED} {RNA1509_43265} {RNA1310_50592} {RNA815_29810.1}

Cumulative graph for MligTC455_50909

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.989 2.125 0.67579 1.00000
RegionR2 1.679 2.125 0.64826 0.98383
RegionR3 0.361 2.125 0.84067 1.00000
RegionR4 -0.101 2.125 0.83638 1.00000
RegionR5 -0.609 2.125 0.98210 1.00000
RegionR6 0.697 2.125 0.81536 1.00000
RegionR7 2.345 2.125 0.22317 0.84473
RegionR8 -5.361 2.125 0.25995 0.88079

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.781 2.125 0.86844 1.00000
RegenerationR2 2.367 2.125 0.26823 0.71408
RegenerationR3 0.748 2.125 0.75707 0.96692
RegenerationR4 1.805 2.125 0.58710 0.90754
RegenerationR5 2.106 2.125 0.33193 0.75278
RegenerationR6 2.073 2.125 0.31226 0.65989
RegenerationBL 6.246 2.125 0.01698 0.13883
RegenerationTP -1.351 2.125 1.00000 1.00000


Genes with expression patterns similar to MligTC455_50909

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_50909 122 2.54 Mlig455_046070, Mlig455_046077

Neo: -

Age: -

5 1.000 1.000 - 1.000 1.000 1.000

Mlig455_046070 {REF} {Length: 923} {TRANSSPLICED} {RNA1509_43265} {RNA1310_50592, RNA1509_43265} {RNA1509_43265, RNA815_29810.1}

Mlig455_046077 {REF} {Length: 916} {TRANSSPLICED} {RNA1509_43265} {RNA1310_50592} {RNA815_29810.1}
2. MligTC455_21716 16 0.34 Mlig455_010621

Neo: -

Age: -

0.998 - - - - 0.998 - Mlig455_010621 {REF} {Length: 1606} {NoTransDecoderORF} {RNA1310_115082}
3. MligTC455_48954 316 6.59 Mlig455_000336, Mlig455_067936

Neo: -

Age: -

Region-enriched R8: 6.016/0.00000
Region-enriched R7: 4.803/0.00000
Region-enriched R6: 2.001/0.03096

WNT2 0.998 - - - - 0.998 -

Mlig455_000336 {REF} {Length: 2268} {Pfam: wnt family [PF00110.21, score=150.7]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=94.4, Expect=1e-20]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.8, Expect=3e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=95.1, Expect=4e-21]; ENSMUSG00000036856, Wnt4, wingless-type MMTV integration site family, member 4, [Score=93.2, Expect=2e-20]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=95.5, Expect=2e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=137, Expect=4e-36]} {RNA1509_39977} {RNA1310_11459, RNA1509_39977} {RNA1509_39977, RNA815_18855}

Mlig455_067936 {REF} {Length: 2361} {Pfam: wnt family [PF00110.21, score=149.2]} {Human: ENSG00000105989, WNT2, Wnt family member 2, [Score=96.7, Expect=2e-21]; ENSG00000162552, WNT4, Wnt family member 4, [Score=92.0, Expect=6e-20]} {Mouse: ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=97.4, Expect=7e-22]} {Dmel: FBgn0010453, Wnt4, Wnt oncogene analog 4, [Score=75.5, Expect=3e-14]} {Celegans: WBGene00000857, cwn-1, [Score=96.3, Expect=1e-21]} {Smed: dd_Smed_v6_14391_0_1, dd_Smed_v6_14391_0_1, [RH, Score=133, Expect=7e-35]} {RNA1509_39977} {RNA1310_11459} {RNA815_18855}
4. MligTC455_09554 41 0.85 Mlig455_038807

Neo: -

Age: -

0.991 - - - - 0.991 - Mlig455_038807 {REF} {Length: 594} {NoTransDecoderORF} {RNA1310_117051}
5. MligTC455_15356 22 0.45 Mlig455_002421

Neo: -

Age: -

0.982 - - - - 0.982 - Mlig455_002421 {REF} {Length: 588} {NoTransDecoderORF} {RNA1509_51125} {RNA1310_30349.2}
6. MligTC455_43082 281 5.85 Mlig455_043748, Mlig455_047477

Neo: -

Age: -

0.981 - - - - 0.981 -

Mlig455_043748 {REF} {Length: 674} {RNA1509_7484} {RNA1310_67034} {RNA815_1925}

Mlig455_047477 {REF} {Length: 677} {RNA1509_7484} {RNA1310_67034} {RNA815_1925}
7. MligTC455_21878 777 16.19 Mlig455_005870

Neo: -

Age: logFC(26M/2M)=-1.101

TRPM1 0.98 - - - - 0.980 - Mlig455_005870 {REF} {Length: 5568} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=44.1]; Ankyrin repeats (many copies) [PF13637.8, score=38.2]; Ion transport protein [PF00520.33, score=36.8]; Ankyrin repeats (many copies) [PF13857.8, score=36.7]; Ankyrin repeat [PF13606.8, score=26.0]; Ankyrin repeat [PF00023.32, score=25.0]} {Human: ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]; ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=73.2, Expect=3e-12]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=74.7, Expect=8e-13]} {Dmel: FBgn0265194, Trpm, Transient receptor potential cation channel, subfamily M, [Score=59.7, Expect=2e-08]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=70.1, Expect=1e-11]} {Smed: dd_Smed_v6_17981_0_1, dd_Smed_v6_17981_0_1, [Score=93.6, Expect=7e-19]} {RNA1509_43082, RNA1509_7199} {RNA1310_2221.1, RNA1509_43082, RNA1509_7199} {RNA1509_43082, RNA1509_7199, RNA815_581}
8. MligTC455_53510 405 8.43 Mlig455_039941

Neo: -

Age: Up-Down-Down

Region-enriched R8: 3.005/0.01946
Region-enriched R7: 2.875/0.00224

KREMEN1 0.979 - - - - 0.979 - Mlig455_039941 {REF} {Length: 4661} {Pfam: WSC domain [PF01822.21, score=619.2]} {Human: ENSG00000183762, KREMEN1, kringle containing transmembrane protein 1, [Score=66.6, Expect=2e-10]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=63.9, Expect=9e-10]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=71.2, Expect=6e-12]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.0, Expect=3e-06]} {RNA1509_15008} {RNA1310_5799, RNA1509_15008} {RNA1509_15008, RNA815_22574}
9. MligTC455_06993 16 0.33 Mlig455_000978

Neo: -

Age: -

0.977 - - - - 0.977 - Mlig455_000978 {REF} {Length: 563} {NoTransDecoderORF} {RNA1310_138579}
10. MligTC455_41173 89 1.85 Mlig455_012423

Neo: -

Age: -

0.976 - - - - 0.976 - Mlig455_012423 {REF} {Length: 2142} {Pfam: Transcription factor IIA, alpha/beta subunit [PF03153.15, score=22.2]} {RNA1509_43208} {RNA1310_19732} {RNA815_10956}
11. MligTC455_13862 174 3.62 Mlig455_034030

Neo: -

Age: -

SOX11 0.973 - - - - 0.973 - Mlig455_034030 {REF} {Length: 2069} {Pfam: HMG (high mobility group) box [PF00505.21, score=64.8]; HMG-box domain [PF09011.12, score=24.3]} {Human: ENSG00000176887, SOX11, SRY-box 11, [Score=102, Expect=1e-24]; ENSG00000164736, SOX17, SRY-box 17, [Score=102, Expect=2e-24]; ENSG00000171056, SOX7, SRY-box 7, [Score=101, Expect=2e-24]; ENSG00000203883, SOX18, SRY-box 18, [Score=101, Expect=3e-24]; ENSG00000285438, SOX7, SRY-box 7, [Score=101, Expect=2e-24]; ENSG00000125398, SOX9, SRY-box 9, [Score=101, Expect=5e-24]; ENSG00000143842, SOX13, SRY-box 13, [Score=100, Expect=2e-23]; ENSG00000005513, SOX8, SRY-box 8, [Score=100, Expect=8e-24]; ENSG00000100146, SOX10, SRY-box 10, [Score=99.4, Expect=2e-23]; ENSG00000110693, SOX6, SRY-box 6, [Score=98.2, Expect=1e-22]; ENSG00000124766, SOX4, SRY-box 4, [Score=97.1, Expect=2e-22]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [Score=107, Expect=1e-28]; ENSMUSG00000063060, Sox7, SRY (sex determining region Y)-box 7, [Score=104, Expect=2e-25]; ENSMUSG00000063632, Sox11, SRY (sex determining region Y)-box 11, [Score=102, Expect=6e-25]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=111, Expect=2e-27]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [Score=99.8, Expect=2e-24]} {Smed: dd_Smed_v6_36521_0_1, dd_Smed_v6_36521_0_1, [Score=94.4, Expect=2e-22]} {RNA1310_58968} {RNA815_59621}
12. MligTC455_28556 354 7.38 Mlig455_000490

Neo: Irradiation

Age: -

Regeneration-upregulated BL: 3.721

Regeneration-enriched BL: 3.721

ZFP1 0.972 - - - - 0.972 - Mlig455_000490 {REF} {Length: 3890} {Pfam: Zinc-finger double domain [PF13465.8, score=69.5]; Zinc finger, C2H2 type [PF00096.28, score=65.3]; C2H2-type zinc finger [PF13894.8, score=55.1]; C2H2-type zinc finger [PF13912.8, score=23.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.2]} {Human: ENSG00000285178, ZFP1, ZFP1 zinc finger protein, [Score=116, Expect=8e-29]; ENSG00000184517, ZFP1, ZFP1 zinc finger protein, [Score=116, Expect=8e-29]; ENSG00000214029, ZNF891, zinc finger protein 891, [Score=114, Expect=8e-28]; ENSG00000145908, ZNF300, zinc finger protein 300, [Score=113, Expect=5e-27]; ENSG00000269343, ZNF587B, zinc finger protein 587B, [Score=113, Expect=1e-27]; ENSG00000196597, ZNF782, zinc finger protein 782, [Score=112, Expect=1e-26]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=112, Expect=9e-27]} {Mouse: ENSMUSG00000055835, Zfp1, zinc finger protein 1, [Score=115, Expect=7e-29]; ENSMUSG00000012640, Zfp715, zinc finger protein 715, [Score=111, Expect=2e-26]; ENSMUSG00000057835, Zfp119a, zinc finger protein 119a, [Score=111, Expect=1e-26]; ENSMUSG00000029729, Zkscan1, zinc finger with KRAB and SCAN domains 1, [Score=110, Expect=1e-26]; ENSMUSG00000071302, 2610044O15Rik8, RIKEN cDNA 2610044O15 gene, [Score=110, Expect=9e-27]; ENSMUSG00000037001, Zfp39, zinc finger protein 39, [Score=110, Expect=2e-26]} {Dmel: FBgn0001325, Kr, Kruppel, [Score=98.2, Expect=2e-22]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=88.2, Expect=1e-19]} {Smed: dd_Smed_v6_36618_0_1, dd_Smed_v6_36618_0_1, [Score=86.3, Expect=6e-20]} {RNA1509_26395} {RNA1310_3136.2} {RNA815_10241}
13. MligTC455_36555 40 0.84 Mlig455_027790, Mlig455_063458

Neo: -

Age: -

Region-enriched R4: 7.080/0.02387

0.972 - - - - 0.972 -

Mlig455_027790 {REF} {Length: 3034} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=20.8]} {RNA1509_20583} {RNA1310_17633} {RNA815_8151}

Mlig455_063458 {REF} {Length: 3182} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=20.8]} {RNA1509_20583} {RNA1310_17633} {RNA815_8151}
14. MligTC455_24672 39 0.81 Mlig455_047708

Neo: -

Age: -

0.969 - - - - 0.969 - Mlig455_047708 {REF} {Length: 1539} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=32.9]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=26.1]} {Smed: dd_Smed_v6_24805_0_1, dd_Smed_v6_24805_0_1, [Score=150, Expect=2e-41]} {RNA1310_20543} {RNA815_8393}
15. MligTC455_49260 767 15.98 Mlig455_027373, Mlig455_069826

Neo: Int S/G2/M

Age: -

Regeneration-upregulated BL: 2.094

Regeneration-enriched BL: 2.094

MRPL2 0.967 - - - - 0.967 -

Mlig455_027373 {REF} {Length: 2607} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=54.2]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=23.2]} {Human: ENSG00000112651, MRPL2, mitochondrial ribosomal protein L2, [RH, Score=109, Expect=5e-27]} {Mouse: ENSMUSG00000002767, Mrpl2, mitochondrial ribosomal protein L2, [RH, Score=113, Expect=1e-28]} {Dmel: FBgn0036135, mRpL2, mitochondrial ribosomal protein L2, [RH, Score=128, Expect=2e-34]} {Celegans: WBGene00018932, mrpl-2, Mitochondrial Ribosomal Protein, Large, [RH, Score=103, Expect=3e-25]} {Smed: dd_Smed_v6_2712_3_1, dd_Smed_v6_2712_3_1, [RH, Score=191, Expect=3e-58]} {RNA1509_24598, RNA1509_25714} {RNA1310_26184.2, RNA1509_24598, RNA1509_25714} {RNA1509_24598, RNA1509_25714, RNA815_13085}

Mlig455_069826 {REF} {Length: 2600} {TRANSSPLICED} {Pfam: Ribosomal Proteins L2, C-terminal domain [PF03947.20, score=54.2]; Ribosomal Proteins L2, RNA binding domain [PF00181.25, score=23.2]} {Human: ENSG00000112651, MRPL2, mitochondrial ribosomal protein L2, [RH, Score=109, Expect=5e-27]} {Mouse: ENSMUSG00000002767, Mrpl2, mitochondrial ribosomal protein L2, [RH, Score=113, Expect=1e-28]} {Dmel: FBgn0036135, mRpL2, mitochondrial ribosomal protein L2, [RH, Score=128, Expect=2e-34]} {Celegans: WBGene00018932, mrpl-2, Mitochondrial Ribosomal Protein, Large, [RH, Score=103, Expect=3e-25]} {Smed: dd_Smed_v6_2712_3_1, dd_Smed_v6_2712_3_1, [RH, Score=191, Expect=3e-58]} {RNA1509_24598, RNA1509_47147, RNA1509_49769} {RNA1310_26184.2, RNA1509_47147, RNA1509_49769} {RNA1509_47147, RNA1509_49769, RNA815_13085}
16. MligTC455_30484 46 0.95 Mlig455_052929

Neo: -

Age: -

NEUROD1 0.966 - - - - 0.966 - Mlig455_052929 {REF} {Length: 1472} {Pfam: Neuronal helix-loop-helix transcription factor [PF12533.10, score=60.6]; Helix-loop-helix DNA-binding domain [PF00010.28, score=57.4]} {Human: ENSG00000162992, NEUROD1, neuronal differentiation 1, [RH, Score=157, Expect=7e-45]; ENSG00000164600, NEUROD6, neuronal differentiation 6, [RH, Score=154, Expect=3e-44]} {Mouse: ENSMUSG00000034701, Neurod1, neurogenic differentiation 1, [RH, Score=155, Expect=2e-44]; ENSMUSG00000037984, Neurod6, neurogenic differentiation 6, [RH, Score=151, Expect=3e-43]} {Dmel: FBgn0010433, ato, atonal, [RH, Score=84.7, Expect=1e-18]} {Celegans: WBGene00000561, cnd-1, Neurogenic differentiation factor 1, [RH, Score=137, Expect=2e-39]} {Smed: dd_Smed_v6_21717_0_1, dd_Smed_v6_21717_0_1, [RH, Score=140, Expect=2e-40]} {RNA1310_55204} {RNA815_40310}
17. MligTC455_13863 45 0.93 Mlig455_060407

Neo: -

Age: Up-Down-Up

SOX9 0.965 - - - - 0.965 - Mlig455_060407 {REF} {Length: 2109} {Pfam: HMG (high mobility group) box [PF00505.21, score=64.8]; HMG-box domain [PF09011.12, score=25.0]} {Human: ENSG00000125398, SOX9, SRY-box 9, [Score=105, Expect=3e-25]; ENSG00000164736, SOX17, SRY-box 17, [Score=103, Expect=6e-25]; ENSG00000203883, SOX18, SRY-box 18, [Score=101, Expect=2e-24]; ENSG00000143842, SOX13, SRY-box 13, [Score=100, Expect=2e-23]; ENSG00000176887, SOX11, SRY-box 11, [Score=100, Expect=1e-23]; ENSG00000100146, SOX10, SRY-box 10, [Score=100, Expect=1e-23]; ENSG00000005513, SOX8, SRY-box 8, [Score=99.8, Expect=2e-23]} {Mouse: ENSMUSG00000025902, Sox17, SRY (sex determining region Y)-box 17, [Score=110, Expect=1e-27]; ENSMUSG00000000567, Sox9, SRY (sex determining region Y)-box 9, [Score=105, Expect=2e-25]} {Dmel: FBgn0005613, Sox15, Sox box protein 15, [Score=112, Expect=8e-28]} {Celegans: WBGene00001182, egl-13, Transcription factor egl-13, [Score=96.7, Expect=2e-23]} {Smed: dd_Smed_v6_10201_0_1, dd_Smed_v6_10201_0_1, [Score=95.5, Expect=2e-22]} {RNA1310_58968} {RNA815_59621}
18. MligTC455_20838 235 4.89 Mlig455_022987

Neo: -

Age: -

H6PD 0.96 - - - 0.960 - - Mlig455_022987 {REF} {Length: 2684} {TRANSSPLICED} {Pfam: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase [PF01182.22, score=105.1]; Glucose-6-phosphate dehydrogenase, C-terminal domain [PF02781.18, score=96.2]; Glucose-6-phosphate dehydrogenase, NAD binding domain [PF00479.24, score=82.3]} {Human: ENSG00000049239, H6PD, hexose-6-phosphate dehydrogenase/glucose 1-dehydrogenase, [Score=210, Expect=1e-56]} {Mouse: ENSMUSG00000028980, H6pd, hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase), [Score=222, Expect=5e-61]} {Dmel: FBgn0004057, Zw, Zwischenferment, [Score=142, Expect=3e-35]} {Celegans: WBGene00007108, gspd-1, Glucose-6-phosphate 1-dehydrogenase, [Score=133, Expect=1e-32]} {Smed: dd_Smed_v6_2965_0_1, dd_Smed_v6_2965_0_1, [Score=132, Expect=2e-32]} {RNA1509_16416} {RNA1310_9105, RNA1509_16416} {RNA1509_16416, RNA815_2264.1}
19. MligTC455_06171 11 0.22 Mlig455_042271

Neo: -

Age: -

0.959 - - - - 0.959 - Mlig455_042271 {REF} {Length: 213} {NoTransDecoderORF}
20. MligTC455_16657 842 17.53 Mlig455_042515

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.634

Region-enriched R7: 2.586/0.00000
Region-enriched R8: 2.572/0.00150

Regeneration-upregulated BL: 2.469

Regeneration-enriched BL: 2.469

FERD3L 0.958 - - - - 0.958 - Mlig455_042515 {REF} {Length: 1703} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=59.2]} {Human: ENSG00000146618, FERD3L, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=4e-29]} {Mouse: ENSMUSG00000046518, Ferd3l, Fer3 like bHLH transcription factor, [RH, Score=111, Expect=3e-29]} {Dmel: FBgn0037937, Fer3, 48 related 3, [RH, Score=119, Expect=5e-32]} {Celegans: WBGene00001957, hlh-13, Helix-loop-helix protein 13, [Score=67.8, Expect=1e-13]} {Smed: dd_Smed_v6_8096_0_1, dd_Smed_v6_8096_0_1, [RH, Score=120, Expect=2e-32]} {RNA1509_28158} {RNA1310_23170} {RNA815_15242}
21. MligTC455_27760 33 0.69 Mlig455_013826, Mlig455_056115

Neo: -

Age: -

0.958 - - - 0.958 - -

Mlig455_013826 {REF} {Length: 126} {NoTransDecoderORF}

Mlig455_056115 {REF} {Length: 6547} {RNA1509_23004, RNA1509_50524} {RNA1310_13243, RNA1509_50524} {RNA1509_50524, RNA815_20132}
22. MligTC455_16040 159 3.32 Mlig455_029062

Neo: -

Age: -

Region-enriched R7: 3.730/0.00014
Region-enriched R6: 2.603/0.00500

0.957 - - - - 0.957 - Mlig455_029062 {REF} {Length: 1051} {Pfam: Ets-domain [PF00178.24, score=23.5]} {RNA1310_48212} {RNA815_36794}
23. MligTC455_18821 223 4.64 Mlig455_042125

Neo: -

Age: -

Region-enriched R8: 8.011/0.00034

WNT1 0.957 - - - - 0.957 - Mlig455_042125 {REF} {Length: 2758} {Pfam: wnt family [PF00110.21, score=265.1]} {Human: ENSG00000125084, WNT1, Wnt family member 1, [Score=180, Expect=1e-51]; ENSG00000105989, WNT2, Wnt family member 2, [Score=178, Expect=3e-51]; ENSG00000002745, WNT16, Wnt family member 16, [Score=172, Expect=6e-49]; ENSG00000154764, WNT7A, Wnt family member 7A, [Score=172, Expect=8e-49]} {Mouse: ENSMUSG00000022997, Wnt1, wingless-type MMTV integration site family, member 1, [Score=180, Expect=7e-52]; ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=176, Expect=1e-50]; ENSMUSG00000010797, Wnt2, wingless-type MMTV integration site family, member 2, [Score=175, Expect=3e-50]; ENSMUSG00000030093, Wnt7a, wingless-type MMTV integration site family, member 7A, [Score=172, Expect=5e-49]} {Dmel: FBgn0004360, Wnt2, Wnt oncogene analog 2, [Score=145, Expect=2e-39]} {Celegans: WBGene00000858, cwn-2, [Score=159, Expect=2e-44]} {Smed: dd_Smed_v6_28398_0_1, dd_Smed_v6_28398_0_1, [RH, Score=227, Expect=9e-70]} {RNA1509_55690} {RNA1310_28464, RNA1509_55690} {RNA1509_55690, RNA815_12843}
24. MligTC455_22276 879 18.32 Mlig455_052291

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.546

Region-enriched R5: 1.399/0.04284

PKM 0.957 - - - - 0.957 - Mlig455_052291 {REF} {Length: 2742} {TRANSSPLICED} {Pfam: Pyruvate kinase, barrel domain [PF00224.23, score=533.1]; Pyruvate kinase, alpha/beta domain [PF02887.18, score=107.5]; HpcH/HpaI aldolase/citrate lyase family [PF03328.16, score=22.4]} {Human: ENSG00000067225, PKM, pyruvate kinase M1/2, [RH, Score=703, Expect=0.0]; ENSG00000262785, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]; ENSG00000143627, PKLR, pyruvate kinase L/R, [RH, Score=670, Expect=0.0]} {Mouse: ENSMUSG00000032294, Pkm, pyruvate kinase, muscle, [RH, Score=701, Expect=0.0]} {Dmel: FBgn0267385, PyK, Pyruvate kinase, [RH, Score=664, Expect=0.0]} {Celegans: WBGene00009126, pyk-1, Pyruvate kinase, [RH, Score=641, Expect=0.0]} {Smed: dd_Smed_v6_605_0_1, dd_Smed_v6_605_0_1, [RH, Score=771, Expect=0.0]} {RNA1509_1681, RNA1509_47167} {RNA1310_7731.1, RNA1509_47167} {RNA1509_47167, RNA815_3516.1}
25. MligTC455_19358 257 5.35 Mlig455_066132

Neo: -

Age: -

Region-enriched R7: 2.720/0.00219

0.954 - - - - 0.954 - Mlig455_066132 {REF} {Length: 828} {RNA1509_29828} {RNA1310_19258} {RNA815_18075}
26. MligTC455_21789 52 1.07 Mlig455_032584

Neo: -

Age: -

0.954 - - - - 0.954 - Mlig455_032584 {REF} {Length: 1578} {Pfam: Integrase zinc binding domain [PF17921.3, score=54.9]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=34.1]; Integrase core domain [PF00665.28, score=29.0]} {Smed: dd_Smed_v6_1574_6_73, dd_Smed_v6_1574_6_73, [Score=124, Expect=8e-31]} {RNA1509_29748} {RNA1310_1140.1} {RNA815_993.1}
27. MligTC455_31336 134 2.79 Mlig455_008181, Mlig455_008225

Neo: -

Age: Up-Down-Up

Region-enriched R4: 3.692/0.00727
Region-enriched R3: 3.159/0.03019

Regeneration-upregulated R6: 3.625

Regeneration-enriched R6: 3.625

NYNRIN, PTPRC 0.954 - - - - - 0.954

Mlig455_008181 {REF} {Length: 5262} {Pfam: Protein-tyrosine phosphatase [PF00102.29, score=132.5]; Integrase zinc binding domain [PF17921.3, score=58.7]; Integrase core domain [PF00665.28, score=45.5]; Low-density lipoprotein receptor domain class A [PF00057.20, score=22.8]} {Human: ENSG00000081237, PTPRC, protein tyrosine phosphatase, receptor type C, [Score=113, Expect=2e-24]; ENSG00000132670, PTPRA, protein tyrosine phosphatase, receptor type A, [Score=108, Expect=5e-23]} {Mouse: ENSMUSG00000026395, Ptprc, protein tyrosine phosphatase, receptor type, C, [Score=110, Expect=9e-24]; ENSMUSG00000068748, Ptprz1, protein tyrosine phosphatase, receptor type Z, polypeptide 1, [Score=107, Expect=1e-22]; ENSMUSG00000027303, Ptpra, protein tyrosine phosphatase, receptor type, A, [Score=106, Expect=9e-23]} {Dmel: FBgn0014007, Ptp69D, Protein tyrosine phosphatase 69D, [Score=98.6, Expect=4e-20]} {Celegans: WBGene00000548, clr-1, Receptor-type tyrosine-protein phosphatase, [Score=96.3, Expect=1e-19]} {Smed: dd_Smed_v6_13361_0_1, dd_Smed_v6_13361_0_1, [RH, Score=122, Expect=1e-27]} {RNA1509_12551} {RNA1310_1005.1} {RNA815_895.1}

Mlig455_008225 {REF} {Length: 1385} {Pfam: Integrase zinc binding domain [PF17921.3, score=60.9]; Integrase core domain [PF00665.28, score=47.8]; Integrase core domain [PF13683.8, score=20.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=89.4, Expect=3e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=94.4, Expect=6e-20]} {Smed: dd_Smed_v6_45837_0_1, dd_Smed_v6_45837_0_1, [RH, Score=67.8, Expect=3e-14]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}
28. MligTC455_17677 160 3.33 Mlig455_041523, Mlig455_069400

Neo: Int S/G2/M

Age: -

0.953 - - - - 0.953 -

Mlig455_041523 {REF} {Length: 473} {RNA1509_40602} {RNA1310_17891} {RNA815_61785}

Mlig455_069400 {REF} {Length: 429} {RNA1509_40602} {RNA1310_17891} {RNA815_61785}
29. MligTC455_53573 220 4.58 Mlig455_033230

Neo: -

Age: logFC(26M/2M)=-0.512

Region-enriched R8: 7.203/0.00000
Region-enriched R7: 4.245/0.02326

LMNB1 0.953 - - - - 0.953 - Mlig455_033230 {REF} {Length: 2512} {Pfam: Intermediate filament protein [PF00038.23, score=183.5]; Lamin Tail Domain [PF00932.21, score=45.5]; Septation ring formation regulator, EzrA [PF06160.14, score=24.2]} {Human: ENSG00000113368, LMNB1, lamin B1, [Score=181, Expect=5e-49]; ENSG00000160789, LMNA, lamin A/C, [Score=177, Expect=2e-47]} {Mouse: ENSMUSG00000024590, Lmnb1, lamin B1, [Score=180, Expect=8e-49]; ENSMUSG00000028063, Lmna, lamin A, [Score=172, Expect=8e-46]} {Dmel: FBgn0002525, Lam, Lamin, [RH, Score=201, Expect=2e-56]} {Celegans: WBGene00002050, ifa-1, Intermediate filament protein ifa-1, [RH, Score=404, Expect=3e-134]} {Smed: dd_Smed_v6_3871_0_1, dd_Smed_v6_3871_0_1, [RH, Score=577, Expect=0.0]} {RNA1509_3449} {RNA1310_9642} {RNA815_3251.1}
30. MligTC455_10259 124 2.58 Mlig455_052843

Neo: Int S/G2/M

Age: -

0.952 - - - - 0.952 - Mlig455_052843 {REF} {Length: 1170} {RNA1310_32241.1} {RNA815_32339}
31. MligTC455_44046 903 18.81 Mlig455_001040, Mlig455_064249

Neo: -

Age: logFC(26M/2M)=-0.399

CCDC17 0.952 - - - 0.952 - -

Mlig455_001040 {REF} {Length: 4786} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=8e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=486, Expect=1e-148]} {RNA1509_31781} {RNA1310_2813.2} {RNA815_3640}

Mlig455_064249 {REF} {Length: 4754} {TRANSSPLICED} {Human: ENSG00000159588, CCDC17, coiled-coil domain containing 17, [RH, Score=109, Expect=7e-24]} {Mouse: ENSMUSG00000034035, Ccdc17, coiled-coil domain containing 17, [RH, Score=104, Expect=2e-22]} {Smed: dd_Smed_v6_14654_0_1, dd_Smed_v6_14654_0_1, [RH, Score=494, Expect=8e-152]} {RNA1509_31781} {RNA1310_2813.2} {RNA815_3640}
32. MligTC455_01301 87 1.8 Mlig455_043435

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_043435 {REF} {Length: 188} {NoTransDecoderORF} {RNA1310_32344} {RNA815_60547}
33. MligTC455_01302 87 1.8 Mlig455_043438

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_043438 {REF} {Length: 174} {NoTransDecoderORF} {RNA1310_32344} {RNA815_60547}
34. MligTC455_20991 187 3.89 Mlig455_022250

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=6.428

Region-enriched R3: 6.761/0.00001

MEP1B 0.951 - - - - 0.951 - Mlig455_022250 {REF} {Length: 892} {Pfam: Astacin (Peptidase family M12A) [PF01400.26, score=158.6]} {Human: ENSG00000141434, MEP1B, meprin A subunit beta, [RH, Score=130, Expect=1e-33]} {Mouse: ENSMUSG00000024313, Mep1b, meprin 1 beta, [RH, Score=132, Expect=1e-34]} {Dmel: FBgn0039069, CG6763, [RH, Score=147, Expect=3e-42]} {Celegans: WBGene00003525, nas-6, Zinc metalloproteinase nas-6, [RH, Score=143, Expect=8e-41]} {Smed: dd_Smed_v6_85_0_1, dd_Smed_v6_85_0_1, [RH, Score=131, Expect=3e-37]} {RNA1509_2621} {RNA1310_42790.1} {RNA815_21158.1}
35. MligTC455_30995 24 0.5 Mlig455_028102

Neo: -

Age: -

0.951 - - - 0.951 - - Mlig455_028102 {REF} {Length: 905} {TRANSSPLICED} {Smed: dd_Smed_v6_29621_0_1, dd_Smed_v6_29621_0_1, [Score=64.3, Expect=2e-13]} {RNA1509_9219} {RNA1310_468} {RNA815_355.1}
36. MligTC455_37650 11 0.23 Mlig455_058650

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_058650 {REF} {Length: 1727} {NoTransDecoderORF} {RNA1509_14662} {RNA1310_37734} {RNA815_42070}
37. MligTC455_08865 151 3.15 Mlig455_056733

Neo: -

Age: -

ALS2 0.95 - - - - 0.950 - Mlig455_056733 {REF} {Length: 7609} {TRANSSPLICED} {Pfam: Regulator of chromosome condensation (RCC1) repeat [PF00415.20, score=85.1]; MORN repeat [PF02493.22, score=79.5]; Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=45.4]; Regulator of chromosome condensation (RCC1) repeat [PF13540.8, score=38.0]} {Human: ENSG00000003393, ALS2, ALS2, alsin Rho guanine nucleotide exchange factor, [RH, Score=307, Expect=6e-84]} {Mouse: ENSMUSG00000026024, Als2, alsin Rho guanine nucleotide exchange factor, [RH, Score=315, Expect=2e-86]} {Dmel: FBgn0037116, Als2, Amyotrophic lateral sclerosis 2, [RH, Score=87.8, Expect=8e-17]} {Smed: dd_Smed_v6_12762_0_1, dd_Smed_v6_12762_0_1, [Score=73.9, Expect=6e-13]} {RNA1509_6929} {RNA1310_334.1, RNA1509_6929} {RNA1509_6929, RNA815_1754}
38. MligTC455_19642 697 14.51 Mlig455_008581

Neo: -

Age: -

CDKAL1 0.95 - - - - 0.950 - Mlig455_008581 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: Uncharacterized protein family UPF0004 [PF00919.22, score=70.7]; Radical SAM superfamily [PF04055.23, score=52.5]; TRAM domain [PF01938.22, score=22.3]} {Human: ENSG00000145996, CDKAL1, CDK5 regulatory subunit associated protein 1 like 1, [RH, Score=585, Expect=0.0]} {Mouse: ENSMUSG00000006191, Cdkal1, CDK5 regulatory subunit associated protein 1-like 1, [RH, Score=574, Expect=0.0]} {Dmel: FBgn0034214, CG6550, [RH, Score=594, Expect=0.0]} {Celegans: WBGene00022363, Y92H12BL.1, Threonylcarbamoyladenosine tRNA methylthiotransferase, [RH, Score=389, Expect=5e-131]} {Smed: dd_Smed_v6_2358_0_1, dd_Smed_v6_2358_0_1, [RH, Score=558, Expect=0.0]} {RNA1509_38379, RNA1509_55471, RNA1509_8176} {RNA1310_6972.2, RNA1509_38379, RNA1509_55471, RNA1509_8176} {RNA1509_38379, RNA1509_55471, RNA1509_8176, RNA815_7659}
39. MligTC455_51066 526 10.97 Mlig455_044665, Mlig455_044724

Neo: -

Age: Down-Up-Down

Region-enriched R8: 5.381/0.00000

0.95 - - - 0.950 - -

Mlig455_044665 {REF} {Length: 1268} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}

Mlig455_044724 {REF} {Length: 1327} {Smed: dd_Smed_v6_7581_0_1, dd_Smed_v6_7581_0_1, [Score=148, Expect=3e-41]} {RNA1310_47069.2} {RNA815_30975}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA