Data search
Results for MligTC455_07002
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_07002 | 1153 | 24.01 | Mlig455_048003, Mlig455_063707 | Neo: - Age: - |
TRIM71 | Mlig455_048003 {REF} {Length: 2815} {Pfam: NHL repeat [PF01436.23, score=31.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.5]; Ring finger domain [PF13639.8, score=20.9]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=60.5, Expect=6e-09]} {RNA1509_14700, RNA1509_6427} {RNA1310_5554, RNA1509_14700} {RNA1509_14700, RNA815_1635} Mlig455_063707 {REF} {Length: 3347} {Pfam: NHL repeat [PF01436.23, score=31.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.5]; Ring finger domain [PF13639.8, score=20.9]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=60.5, Expect=6e-09]} {RNA1509_6427} {RNA1310_5554, RNA1509_6427} {RNA1509_6427, RNA815_1635} |
Cumulative graph for MligTC455_07002
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.126 | 4.853 | 0.18045 | 0.80933 | |
| RegionR2 | 0.544 | 4.853 | 0.14091 | 0.46706 | |
| RegionR3 | 0.51 | 4.853 | 0.07701 | 0.49125 | |
| RegionR4 | 0.27 | 4.853 | 0.44081 | 0.76962 | |
| RegionR5 | 0.768 | 4.853 | 0.00334 | 0.02559 | |
| RegionR6 | 0.206 | 4.853 | 0.49291 | 1.00000 | |
| RegionR7 | -0.519 | 4.853 | 0.17183 | 0.76151 | |
| RegionR8 | -0.653 | 4.853 | 0.15144 | 0.70573 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.824 | 4.853 | 0.59969 | 1.00000 | |
| RegenerationR2 | -0.394 | 4.853 | 0.21985 | 0.66761 | |
| RegenerationR3 | -0.423 | 4.853 | 0.22792 | 0.66332 | |
| RegenerationR4 | -0.468 | 4.853 | 0.20512 | 0.65161 | |
| RegenerationR5 | -0.358 | 4.853 | 0.26845 | 0.70002 | |
| RegenerationR6 | 0.117 | 4.853 | 0.74460 | 0.94942 | |
| RegenerationBL | -1.461 | 4.853 | 0.01126 | 0.10802 | |
| RegenerationTP | 0.775 | 4.853 | 0.08194 | 0.45429 |
Genes with expression patterns similar to MligTC455_07002
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_07002 | 1153 | 24.01 | Mlig455_048003, Mlig455_063707 | Neo: - Age: - |
TRIM71 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048003 {REF} {Length: 2815} {Pfam: NHL repeat [PF01436.23, score=31.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.5]; Ring finger domain [PF13639.8, score=20.9]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=60.5, Expect=6e-09]} {RNA1509_14700, RNA1509_6427} {RNA1310_5554, RNA1509_14700} {RNA1509_14700, RNA815_1635} Mlig455_063707 {REF} {Length: 3347} {Pfam: NHL repeat [PF01436.23, score=31.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.5]; Ring finger domain [PF13639.8, score=20.9]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=60.5, Expect=6e-09]} {RNA1509_6427} {RNA1310_5554, RNA1509_6427} {RNA1509_6427, RNA815_1635} |
| 2. | MligTC455_22532 | 3930 | 81.87 | Mlig455_048498 | Neo: - Age: Down-Down-Up |
SF3B6 | 1.715 | - | - | 0.958 | 0.757 | - | - | Mlig455_048498 {REF} {Length: 657} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=53.4]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=23.4]} {Human: ENSG00000115128, SF3B6, splicing factor 3b subunit 6, [RH, Score=187, Expect=5e-62]} {Mouse: ENSMUSG00000037361, Sf3b6, splicing factor 3B, subunit 6, [RH, Score=187, Expect=3e-62]} {Dmel: FBgn0035692, Sf3b6, Splicing factor 3b subunit 6, [RH, Score=197, Expect=3e-66]} {Celegans: WBGene00016808, C50D2.5, Splicing factor 3B subunit 6-like protein, [RH, Score=177, Expect=3e-58]} {Smed: dd_Smed_v6_2216_0_1, dd_Smed_v6_2216_0_1, [RH, Score=175, Expect=8e-58]} {RNA1509_15469, RNA1509_18559, RNA1509_20062, RNA1509_31460, RNA1509_34896, RNA1509_35054, RNA1509_47284} {RNA1310_53909.1, RNA1509_15469, RNA1509_18559, RNA1509_20062, RNA1509_31460, RNA1509_34896, RNA1509_35054, RNA1509_47284} {RNA1509_15469, RNA1509_18559, RNA1509_20062, RNA1509_31460, RNA1509_34896, RNA1509_35054, RNA1509_47284, RNA815_27420} |
| 3. | MligTC455_18760 | 592 | 12.32 | Mlig455_043808, Mlig455_047436 | Neo: - Age: - Region-enriched R4: 1.923/0.00630 Regeneration-upregulated BL: 2.460 Regeneration-enriched BL: 2.460 |
FAM161B | 0.974 | - | - | 0.974 | - | - | - | Mlig455_043808 {REF} {Length: 4597} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=110.8]} {Human: ENSG00000156050, FAM161B, FAM161B, centrosomal protein, [Score=107, Expect=7e-23]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [Score=94.7, Expect=2e-19]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [Score=134, Expect=9e-32]} {RNA1509_14244} {RNA1310_5510.1} {RNA815_8869} Mlig455_047436 {REF} {Length: 5034} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=111.8]} {Human: ENSG00000156050, FAM161B, FAM161B, centrosomal protein, [RH, Score=105, Expect=1e-22]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [RH, Score=95.5, Expect=1e-19]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [Score=134, Expect=5e-32]} {RNA1509_14244} {RNA1310_5510.1} {RNA815_8869} |
| 4. | MligTC455_44167 | 1076 | 22.43 | Mlig455_059891 | Neo: - Age: logFC(26M/2M)=0.416 Regeneration-upregulated BL: 1.576 Regeneration-enriched BL: 1.576 |
SRSF7 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_059891 {REF} {Length: 1013} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.9]; RNA recognition motif [PF16367.7, score=23.9]; Zinc knuckle [PF00098.25, score=22.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=19.8]; Zinc knuckle [PF13917.8, score=19.5]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=147, Expect=3e-45]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=147, Expect=2e-45]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=105, Expect=5e-28]} {Celegans: WBGene00013293, Y57G11A.5, [Score=76.6, Expect=2e-18]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=129, Expect=9e-39]} {RNA1509_37237, RNA1509_48999} {RNA1310_34684.1, RNA1509_48999} {RNA1509_48999, RNA815_20639} |
| 5. | MligTC455_40807 | 2250 | 46.87 | Mlig455_020246 | Neo: Int S/G2/M Age: - Regeneration-enriched BL: 1.278 |
FUBP3 | 0.957 | 0.957 | - | - | - | - | - | Mlig455_020246 {REF} {Length: 3235} {TRANSSPLICED} {Pfam: KH domain [PF00013.31, score=200.1]; KH domain [PF07650.19, score=58.3]; KH domain [PF13083.8, score=46.2]; Domain of unknown function (DUF1897) [PF09005.12, score=44.3]; Mitochondrial inner-membrane-bound regulator [PF14611.8, score=25.0]} {Human: ENSG00000107164, FUBP3, far upstream element binding protein 3, [RH, Score=231, Expect=1e-67]; ENSG00000162613, FUBP1, far upstream element binding protein 1, [RH, Score=221, Expect=4e-63]} {Mouse: ENSMUSG00000026843, Fubp3, far upstream element (FUSE) binding protein 3, [RH, Score=239, Expect=2e-70]} {Dmel: FBgn0014870, Psi, P-element somatic inhibitor, [RH, Score=156, Expect=6e-40]} {Celegans: WBGene00007534, C12D8.1, [RH, Score=194, Expect=4e-54]} {Smed: dd_Smed_v6_812_0_1, dd_Smed_v6_812_0_1, [RH, Score=167, Expect=8e-45]} {RNA1509_19585, RNA1509_32500, RNA1509_4724} {RNA1310_15295.1, RNA1509_19585, RNA1509_32500, RNA1509_4724} {RNA1509_19585, RNA1509_32500, RNA1509_4724, RNA815_1823} |
| 6. | MligTC455_46780 | 396 | 8.26 | Mlig455_044008 | Neo: - Age: Up-Down-Down |
0.956 | - | - | 0.956 | - | - | - | Mlig455_044008 {REF} {Length: 5261} {TRANSSPLICED} {Pfam: C2 domain [PF00168.32, score=28.9]} {Dmel: FBgn0034420, CG10737, [RH, Score=70.9, Expect=4e-12]} {Smed: dd_Smed_v6_6358_0_1, dd_Smed_v6_6358_0_1, [Score=55.1, Expect=1e-07]} {RNA1509_17372} {RNA1310_6655, RNA1509_17372} {RNA1509_17372, RNA815_21591} |