TomoSeq data search

Data search

Results for MligTC455_18760

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_18760

592

12.32

Mlig455_043808, Mlig455_047436

Neo: -

Age: -

Region-enriched R4: 1.923/0.00630

Regeneration-upregulated BL: 2.460

Regeneration-enriched BL: 2.460

FAM161B

Mlig455_043808 {REF} {Length: 4597} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=110.8]} {Human: ENSG00000156050, FAM161B, FAM161B, centrosomal protein, [Score=107, Expect=7e-23]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [Score=94.7, Expect=2e-19]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [Score=134, Expect=9e-32]} {RNA1509_14244} {RNA1310_5510.1} {RNA815_8869}

Mlig455_047436 {REF} {Length: 5034} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=111.8]} {Human: ENSG00000156050, FAM161B, FAM161B, centrosomal protein, [RH, Score=105, Expect=1e-22]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [RH, Score=95.5, Expect=1e-19]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [Score=134, Expect=5e-32]} {RNA1509_14244} {RNA1310_5510.1} {RNA815_8869}

Cumulative graph for MligTC455_18760

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	1.411	3.979	0.27836	0.92883
RegionR2	-0.024	3.979	0.97420	1.00000
RegionR3	0.296	3.979	0.49921	0.99420
RegionR4	1.923	3.979	0.00053	0.00630
RegionR5	0.933	3.979	0.02205	0.10407
RegionR6	-0.085	3.979	0.87660	1.00000
RegionR7	-3.591	3.979	0.00030	0.01374
RegionR8	-0.862	3.979	0.33275	0.96689

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-7.487	3.979	0.06676	0.74494
RegenerationR2	0.565	3.979	0.15883	0.59525
RegenerationR3	-0.1	3.979	0.82741	0.99017
RegenerationR4	-0.91	3.979	0.06371	0.40341
RegenerationR5	-0.319	3.979	0.47379	0.84353
RegenerationR6	-0.853	3.979	0.10622	0.40409
RegenerationBL	2.46	3.979	0.00006	0.00297	Specific for BL: 2.460
RegenerationTP	1.443	3.979	0.10410	0.50006

Genes with expression patterns similar to MligTC455_18760

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_18760	592	12.32	Mlig455_043808, Mlig455_047436	Neo: - Age: - Region-enriched R4: 1.923/0.00630 Regeneration-upregulated BL: 2.460 Regeneration-enriched BL: 2.460	FAM161B	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_043808 {REF} {Length: 4597} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=110.8]} {Human: ENSG00000156050, FAM161B, FAM161B, centrosomal protein, [Score=107, Expect=7e-23]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [Score=94.7, Expect=2e-19]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [Score=134, Expect=9e-32]} {RNA1509_14244} {RNA1310_5510.1} {RNA815_8869} Mlig455_047436 {REF} {Length: 5034} {Pfam: Uncharacterised protein family UPF0564 [PF10595.11, score=111.8]} {Human: ENSG00000156050, FAM161B, FAM161B, centrosomal protein, [RH, Score=105, Expect=1e-22]} {Mouse: ENSMUSG00000021234, Fam161b, family with sequence similarity 161, member B, [RH, Score=95.5, Expect=1e-19]} {Smed: dd_Smed_v6_15201_0_1, dd_Smed_v6_15201_0_1, [Score=134, Expect=5e-32]} {RNA1509_14244} {RNA1310_5510.1} {RNA815_8869}
2.	MligTC455_46563	675	14.06	Mlig455_031729	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.371		2.507	-	-	-	0.749	0.806	0.952	Mlig455_031729 {REF} {Length: 3393} {RNA1509_50830, RNA1509_9486} {RNA1310_4618, RNA1509_50830} {RNA1509_50830, RNA815_19170}
3.	MligTC455_07002	1153	24.01	Mlig455_048003, Mlig455_063707	Neo: - Age: -	TRIM71	0.974	-	-	0.974	-	-	-	Mlig455_048003 {REF} {Length: 2815} {Pfam: NHL repeat [PF01436.23, score=31.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.5]; Ring finger domain [PF13639.8, score=20.9]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=60.5, Expect=6e-09]} {RNA1509_14700, RNA1509_6427} {RNA1310_5554, RNA1509_14700} {RNA1509_14700, RNA815_1635} Mlig455_063707 {REF} {Length: 3347} {Pfam: NHL repeat [PF01436.23, score=31.3]; zinc finger of C3HC4-type, RING [PF15227.8, score=27.3]; RING-type zinc-finger [PF13445.8, score=24.3]; Zinc finger, C3HC4 type (RING finger) [PF00097.27, score=22.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.5]; Ring finger domain [PF13639.8, score=20.9]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=58.9, Expect=2e-08]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=60.5, Expect=6e-09]} {RNA1509_6427} {RNA1310_5554, RNA1509_6427} {RNA1509_6427, RNA815_1635}
4.	MligTC455_44167	1076	22.43	Mlig455_059891	Neo: - Age: logFC(26M/2M)=0.416 Regeneration-upregulated BL: 1.576 Regeneration-enriched BL: 1.576	SRSF7	0.962	-	-	0.962	-	-	-	Mlig455_059891 {REF} {Length: 1013} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=61.9]; RNA recognition motif [PF16367.7, score=23.9]; Zinc knuckle [PF00098.25, score=22.0]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF13893.8, score=19.8]; Zinc knuckle [PF13917.8, score=19.5]} {Human: ENSG00000115875, SRSF7, serine and arginine rich splicing factor 7, [RH, Score=147, Expect=3e-45]} {Mouse: ENSMUSG00000024097, Srsf7, serine/arginine-rich splicing factor 7, [RH, Score=147, Expect=2e-45]} {Dmel: FBgn0028554, x16, x16 splicing factor, [RH, Score=105, Expect=5e-28]} {Celegans: WBGene00013293, Y57G11A.5, [Score=76.6, Expect=2e-18]} {Smed: dd_Smed_v6_2424_0_1, dd_Smed_v6_2424_0_1, [RH, Score=129, Expect=9e-39]} {RNA1509_37237, RNA1509_48999} {RNA1310_34684.1, RNA1509_48999} {RNA1509_48999, RNA815_20639}

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