Data search
Results for MligTC455_07028
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_07028 | 111 | 2.32 | Mlig455_008885, Mlig455_008990 | Neo: - Age: Up-Down-Down |
KCNB1, KCNC1 | Mlig455_008885 {REF} {Length: 4331} {Pfam: Ion transport protein [PF00520.33, score=106.1]; BTB/POZ domain [PF02214.24, score=58.3]; Ion channel [PF07885.18, score=54.1]} {Human: ENSG00000158445, KCNB1, potassium voltage-gated channel subfamily B member 1, [Score=211, Expect=1e-56]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=209, Expect=2e-57]; ENSG00000182674, KCNB2, potassium voltage-gated channel subfamily B member 2, [Score=205, Expect=1e-54]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=205, Expect=3e-56]} {Mouse: ENSMUSG00000050556, Kcnb1, potassium voltage gated channel, Shab-related subfamily, member 1, [Score=211, Expect=6e-57]; ENSMUSG00000092083, Kcnb2, potassium voltage gated channel, Shab-related subfamily, member 2, [Score=207, Expect=2e-55]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=207, Expect=9e-57]; ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=204, Expect=3e-56]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=217, Expect=6e-61]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=208, Expect=4e-58]} {Smed: dd_Smed_v6_13416_0_1, dd_Smed_v6_13416_0_1, [Score=207, Expect=8e-57]} {RNA1509_26535} {RNA1310_9659.1} {RNA815_18929} Mlig455_008990 {REF} {Length: 3389} {Pfam: BTB/POZ domain [PF02214.24, score=59.9]; Ion transport protein [PF00520.33, score=19.3]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=80.5, Expect=7e-16]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=77.4, Expect=7e-15]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=80.1, Expect=6e-16]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=77.0, Expect=7e-15]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=88.2, Expect=8e-19]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=87.4, Expect=1e-18]} {Smed: dd_Smed_v6_42862_0_1, dd_Smed_v6_42862_0_1, [Score=148, Expect=2e-41]} {RNA1509_26535} {RNA1310_9659.1} {RNA815_18929} |
Cumulative graph for MligTC455_07028
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -4.476 | 2.02 | 0.38583 | 1.00000 | |
| RegionR2 | 0.956 | 2.02 | 0.40187 | 0.79581 | |
| RegionR3 | -3.191 | 2.02 | 1.00000 | 1.00000 | |
| RegionR4 | 0.883 | 2.02 | 0.46940 | 0.79743 | |
| RegionR5 | 1.241 | 2.02 | 0.18522 | 0.46523 | |
| RegionR6 | 1.668 | 2.02 | 0.06545 | 0.47931 | |
| RegionR7 | 1.846 | 2.02 | 0.07774 | 0.53753 | |
| RegionR8 | 1.074 | 2.02 | 0.44085 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.552 | 2.02 | 0.99998 | 1.00000 | |
| RegenerationR2 | -1.176 | 2.02 | 0.14606 | 0.57772 | |
| RegenerationR3 | 1.747 | 2.02 | 0.17471 | 0.61064 | |
| RegenerationR4 | -2 | 2.02 | 0.05867 | 0.38868 | |
| RegenerationR5 | -0.895 | 2.02 | 0.28882 | 0.71698 | |
| RegenerationR6 | -1.211 | 2.02 | 0.16292 | 0.49202 | |
| RegenerationBL | -6.349 | 2.02 | 0.00255 | 0.04224 | |
| RegenerationTP | -1.39 | 2.02 | 0.21886 | 0.66224 |
Genes with expression patterns similar to MligTC455_07028
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_07028 | 111 | 2.32 | Mlig455_008885, Mlig455_008990 | Neo: - Age: Up-Down-Down |
KCNB1, KCNC1 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_008885 {REF} {Length: 4331} {Pfam: Ion transport protein [PF00520.33, score=106.1]; BTB/POZ domain [PF02214.24, score=58.3]; Ion channel [PF07885.18, score=54.1]} {Human: ENSG00000158445, KCNB1, potassium voltage-gated channel subfamily B member 1, [Score=211, Expect=1e-56]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=209, Expect=2e-57]; ENSG00000182674, KCNB2, potassium voltage-gated channel subfamily B member 2, [Score=205, Expect=1e-54]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=205, Expect=3e-56]} {Mouse: ENSMUSG00000050556, Kcnb1, potassium voltage gated channel, Shab-related subfamily, member 1, [Score=211, Expect=6e-57]; ENSMUSG00000092083, Kcnb2, potassium voltage gated channel, Shab-related subfamily, member 2, [Score=207, Expect=2e-55]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=207, Expect=9e-57]; ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=204, Expect=3e-56]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=217, Expect=6e-61]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=208, Expect=4e-58]} {Smed: dd_Smed_v6_13416_0_1, dd_Smed_v6_13416_0_1, [Score=207, Expect=8e-57]} {RNA1509_26535} {RNA1310_9659.1} {RNA815_18929} Mlig455_008990 {REF} {Length: 3389} {Pfam: BTB/POZ domain [PF02214.24, score=59.9]; Ion transport protein [PF00520.33, score=19.3]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=80.5, Expect=7e-16]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=77.4, Expect=7e-15]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=80.1, Expect=6e-16]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=77.0, Expect=7e-15]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=88.2, Expect=8e-19]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=87.4, Expect=1e-18]} {Smed: dd_Smed_v6_42862_0_1, dd_Smed_v6_42862_0_1, [Score=148, Expect=2e-41]} {RNA1509_26535} {RNA1310_9659.1} {RNA815_18929} |
| 2. | MligTC455_28432 | 140 | 2.93 | Mlig455_067063 | Neo: - Age: - |
1.71 | - | - | - | - | 0.954 | 0.756 | Mlig455_067063 {REF} {Length: 554} {NoTransDecoderORF} {RNA1509_35415} {RNA1310_51313} {RNA815_47793} | |
| 3. | MligTC455_10097 | 24 | 0.49 | Mlig455_008182, Mlig455_008226 | Neo: - Age: - |
1.699 | - | - | - | - | 0.968 | 0.731 | Mlig455_008182 {REF} {Length: 1091} {NoTransDecoderORF} {RNA1310_77266} {RNA815_48223} Mlig455_008226 {REF} {Length: 1171} {RNA1310_77266} {RNA815_48223} |
|
| 4. | MligTC455_26100 | 107 | 2.23 | Mlig455_009360 | Neo: - Age: - |
0.975 | - | - | - | - | 0.975 | - | Mlig455_009360 {REF} {Length: 2626} {RNA1509_51525} {RNA1310_9237.1} {RNA815_5309} | |
| 5. | MligTC455_24217 | 6 | 0.12 | Mlig455_027982 | Neo: - Age: - |
MFGE8 | 0.974 | - | - | - | - | 0.974 | - | Mlig455_027982 {REF} {Length: 8330} {Pfam: Lectin C-type domain [PF00059.23, score=65.0]; WSC domain [PF01822.21, score=45.1]} {Human: ENSG00000140545, MFGE8, milk fat globule-EGF factor 8 protein, [Score=52.4, Expect=7e-06]} {RNA1310_52904} |
| 6. | MligTC455_35021 | 146 | 3.03 | Mlig455_011817 | Neo: - Age: - |
PIK3C3 | 0.972 | - | - | - | - | 0.972 | - | Mlig455_011817 {REF} {Length: 6459} {TRANSSPLICED} {Pfam: Phosphoinositide 3-kinase family, accessory domain (PIK domain) [PF00613.22, score=163.2]; Phosphatidylinositol 3- and 4-kinase [PF00454.29, score=155.8]; Phosphoinositide 3-kinase C2 [PF00792.26, score=85.9]} {Human: ENSG00000078142, PIK3C3, phosphatidylinositol 3-kinase catalytic subunit type 3, [RH, Score=634, Expect=0.0]} {Mouse: ENSMUSG00000033628, Pik3c3, phosphatidylinositol 3-kinase catalytic subunit type 3, [Score=640, Expect=0.0]} {Dmel: FBgn0015277, Pi3K59F, Phosphotidylinositol 3 kinase 59F, [RH, Score=357, Expect=1e-107]} {Celegans: WBGene00006932, vps-34, Phosphatidylinositol 3-kinase catalytic subunit type 3, [RH, Score=478, Expect=3e-154]} {Smed: dd_Smed_v6_5028_0_1, dd_Smed_v6_5028_0_1, [RH, Score=375, Expect=3e-115]} {RNA1509_16484} {RNA1310_5272.1, RNA1509_16484} {RNA1509_16484, RNA815_3723} |
| 7. | MligTC455_14621 | 10 | 0.21 | Mlig455_055817, Mlig455_056762 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_055817 {REF} {Length: 552} {NoTransDecoderORF} {RNA1509_31170} {RNA1310_11842} {RNA815_552.2} Mlig455_056762 {REF} {Length: 613} {NoTransDecoderORF} {RNA1509_31170} {RNA1310_11842} {RNA815_2791.1} |
|
| 8. | MligTC455_42286 | 59 | 1.22 | Mlig455_042711 | Neo: - Age: - |
GPR83 | 0.966 | - | - | - | - | 0.966 | - | Mlig455_042711 {REF} {Length: 1706} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=100.2]} {Human: ENSG00000123901, GPR83, G protein-coupled receptor 83, [Score=67.8, Expect=1e-11]} {Mouse: ENSMUSG00000031932, Gpr83, G protein-coupled receptor 83, [Score=68.2, Expect=5e-12]; ENSMUSG00000020090, Npffr1, neuropeptide FF receptor 1, [Score=67.4, Expect=1e-11]; ENSMUSG00000048337, Npy4r, neuropeptide Y receptor Y4, [Score=67.4, Expect=9e-12]} {Dmel: FBgn0004622, TkR99D, Tachykinin-like receptor at 99D, [Score=90.9, Expect=2e-19]} {Celegans: WBGene00021897, ser-6, SERotonin/octopamine receptor family, [Score=64.3, Expect=5e-11]} {Smed: dd_Smed_v6_29182_0_1, dd_Smed_v6_29182_0_1, [Score=67.8, Expect=3e-12]} {RNA1310_19087.1} {RNA815_19700} |
| 9. | MligTC455_20980 | 555 | 11.57 | Mlig455_052512 | Neo: - Age: - |
0.959 | - | - | 0.959 | - | - | - | Mlig455_052512 {REF} {Length: 494} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_55721} {RNA1310_5855} {RNA815_34079} | |
| 10. | MligTC455_43163 | 83 | 1.72 | Mlig455_049916 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_049916 {REF} {Length: 5533} {RNA1509_42367} {RNA1310_23812} {RNA815_14835.1} | |
| 11. | MligTC455_53999 | 175 | 3.65 | Mlig455_031065 | Neo: - Age: - |
ZNF668 | 0.954 | - | - | 0.954 | - | - | - | Mlig455_031065 {REF} {Length: 1242} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=58.2]; C2H2-type zinc finger [PF13894.8, score=49.6]; Zinc-finger double domain [PF13465.8, score=35.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=22.2]; C2H2 type zinc-finger (2 copies) [PF12756.9, score=21.7]} {Human: ENSG00000167394, ZNF668, zinc finger protein 668, [Score=114, Expect=5e-29]; ENSG00000141946, ZIM3, zinc finger imprinted 3, [Score=114, Expect=5e-29]; ENSG00000198453, ZNF568, zinc finger protein 568, [Score=112, Expect=3e-28]; ENSG00000171649, ZIK1, zinc finger protein interacting with K protein 1, [Score=110, Expect=8e-28]; ENSG00000196152, ZNF79, zinc finger protein 79, [Score=109, Expect=2e-27]; ENSG00000099326, MZF1, myeloid zinc finger 1, [Score=109, Expect=3e-27]} {Mouse: ENSMUSG00000049728, Zfp668, zinc finger protein 668, [Score=114, Expect=5e-29]; ENSMUSG00000050954, Zfp169, zinc finger protein 169, [Score=114, Expect=6e-29]; ENSMUSG00000030393, Zik1, zinc finger protein interacting with K protein 1, [Score=110, Expect=5e-28]} {Dmel: FBgn0051632, sens-2, senseless-2, [Score=100, Expect=3e-24]} {Celegans: WBGene00000483, che-1, Transcription factor che-1, [Score=88.6, Expect=1e-21]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=94.7, Expect=4e-23]} {RNA1509_49200, RNA1509_59469} {RNA1310_30149, RNA1509_49200, RNA1509_59469} {RNA1509_49200, RNA1509_59469, RNA815_12591} |
| 12. | MligTC455_03638 | 127 | 2.65 | Mlig455_036032 | Neo: - Age: logFC(26M/2M)=-0.368 |
0.953 | - | - | 0.953 | - | - | - | Mlig455_036032 {REF} {Length: 2195} {TRANSSPLICED} {Pfam: Sulfotransferase domain [PF17784.3, score=200.7]; Sulfotransferase family [PF13469.8, score=21.0]} {Smed: dd_Smed_v6_5024_0_1, dd_Smed_v6_5024_0_1, [Score=164, Expect=6e-50]} {RNA1509_56128} {RNA1310_34491} {RNA815_18571} | |
| 13. | MligTC455_23164 | 517 | 10.77 | Mlig455_010296 | Neo: Irradiation Age: logFC(26M/2M)=0.244 Region-enriched R5: 1.570/0.00003 |
BICD2 | 0.952 | - | - | 0.952 | - | - | - | Mlig455_010296 {REF} {Length: 5817} {Pfam: Microtubule-associated protein Bicaudal-D [PF09730.11, score=354.1]} {Human: ENSG00000185963, BICD2, BICD cargo adaptor 2, [RH, Score=201, Expect=7e-53]; ENSG00000151746, BICD1, BICD cargo adaptor 1, [RH, Score=199, Expect=2e-52]} {Mouse: ENSMUSG00000003452, Bicd1, BICD cargo adaptor 1, [RH, Score=199, Expect=1e-52]; ENSMUSG00000037933, Bicd2, BICD cargo adaptor 2, [RH, Score=199, Expect=1e-52]} {Dmel: FBgn0000183, BicD, Bicaudal D, [RH, Score=212, Expect=4e-57]} {Celegans: WBGene00016611, bicd-1, BICaudal D (Drosophila) homolog, [RH, Score=145, Expect=2e-35]} {Smed: dd_Smed_v6_758_0_1, dd_Smed_v6_758_0_1, [Score=212, Expect=9e-57]} {RNA1509_8363} {RNA1310_3839} {RNA815_1115} |