M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28432

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28432 140 2.93 Mlig455_067063

Neo: -

Age: -

 Mlig455_067063 {REF} {Length: 554} {NoTransDecoderORF} {RNA1509_35415} {RNA1310_51313} {RNA815_47793}

Cumulative graph for MligTC455_28432

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.435 2.281 0.38226 1.00000
RegionR2 1.283 2.281 0.22616 0.59683
RegionR3 1.263 2.281 0.15155 0.65891
RegionR4 1.212 2.281 0.26933 0.57468
RegionR5 -0.765 2.281 0.97818 1.00000
RegionR6 0.875 2.281 0.36452 0.94596
RegionR7 0.867 2.281 0.45502 1.00000
RegionR8 -0.3 2.281 0.93258 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.046 2.281 1.00000 1.00000
RegenerationR2 -0.587 2.281 0.35029 0.78180
RegenerationR3 -1.203 2.281 0.09944 0.50288
RegenerationR4 -1.325 2.281 0.11080 0.51100
RegenerationR5 1.347 2.281 0.07251 0.42256
RegenerationR6 -0.341 2.281 0.66922 0.90829
RegenerationBL -1.84 2.281 0.20903 0.55182
RegenerationTP 1.383 2.281 0.15068 0.57493


Genes with expression patterns similar to MligTC455_28432

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28432 140 2.93 Mlig455_067063

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_067063 {REF} {Length: 554} {NoTransDecoderORF} {RNA1509_35415} {RNA1310_51313} {RNA815_47793}
2. MligTC455_28431 575 11.98 Mlig455_033574, Mlig455_062886, Mlig455_067021

Neo: -

Age: -

 CPEB2, CPEB4 5.516 0.959 0.965 0.772 0.909 0.923 0.988

Mlig455_033574 {REF} {Length: 5383} {TRANSSPLICED} {Pfam: RNA recognition motif [PF16367.7, score=114.3]; Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=73.1]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=51.0]} {Human: ENSG00000283087, CPEB2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=464, Expect=3e-153]; ENSG00000137449, CPEB2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=464, Expect=3e-153]; ENSG00000113742, CPEB4, cytoplasmic polyadenylation element binding protein 4, [RH, Score=462, Expect=3e-156]; ENSG00000107864, CPEB3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=461, Expect=5e-156]} {Mouse: ENSMUSG00000039782, Cpeb2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=464, Expect=9e-154]; ENSMUSG00000020300, Cpeb4, cytoplasmic polyadenylation element binding protein 4, [RH, Score=463, Expect=2e-156]; ENSMUSG00000111861, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=461, Expect=3e-156]; ENSMUSG00000039652, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=461, Expect=3e-156]} {Dmel: FBgn0264307, orb2, [RH, Score=461, Expect=2e-156]} {Celegans: WBGene00000770, cpb-1, Cytoplasmic polyadenylation element-binding protein 1, [RH, Score=263, Expect=2e-81]} {Smed: dd_Smed_v6_8889_0_1, dd_Smed_v6_8889_0_1, [RH, Score=465, Expect=1e-162]} {RNA1509_17336} {RNA1310_6139} {RNA815_15725}

Mlig455_062886 {REF} {Length: 4636} {Pfam: Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=75.7]; RNA recognition motif [PF16367.7, score=51.2]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=23.4]} {Human: ENSG00000137449, CPEB2, cytoplasmic polyadenylation element binding protein 2, [Score=374, Expect=1e-121]; ENSG00000283087, CPEB2, cytoplasmic polyadenylation element binding protein 2, [Score=374, Expect=1e-121]; ENSG00000113742, CPEB4, cytoplasmic polyadenylation element binding protein 4, [Score=373, Expect=3e-124]; ENSG00000107864, CPEB3, cytoplasmic polyadenylation element binding protein 3, [Score=372, Expect=3e-124]} {Mouse: ENSMUSG00000039782, Cpeb2, cytoplasmic polyadenylation element binding protein 2, [Score=374, Expect=4e-122]; ENSMUSG00000020300, Cpeb4, cytoplasmic polyadenylation element binding protein 4, [Score=373, Expect=2e-124]; ENSMUSG00000111861, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [Score=372, Expect=3e-124]; ENSMUSG00000039652, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [Score=372, Expect=3e-124]} {Dmel: FBgn0264307, orb2, [Score=369, Expect=8e-125]} {Celegans: WBGene00000770, cpb-1, Cytoplasmic polyadenylation element-binding protein 1, [Score=228, Expect=4e-70]} {Smed: dd_Smed_v6_8889_0_2, dd_Smed_v6_8889_0_2, [Score=379, Expect=1e-131]} {RNA1509_17336, RNA1509_35415} {RNA1310_6139, RNA1509_17336, RNA1509_35415} {RNA1509_17336, RNA1509_35415, RNA815_22698}

Mlig455_067021 {REF} {Length: 5343} {TRANSSPLICED} {Pfam: RNA recognition motif [PF16367.7, score=114.1]; Cytoplasmic polyadenylation element-binding protein ZZ domain [PF16366.7, score=74.8]; RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=51.0]} {Human: ENSG00000113742, CPEB4, cytoplasmic polyadenylation element binding protein 4, [RH, Score=464, Expect=2e-156]; ENSG00000283087, CPEB2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=464, Expect=1e-153]; ENSG00000137449, CPEB2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=464, Expect=1e-153]} {Mouse: ENSMUSG00000039782, Cpeb2, cytoplasmic polyadenylation element binding protein 2, [RH, Score=465, Expect=4e-154]; ENSMUSG00000020300, Cpeb4, cytoplasmic polyadenylation element binding protein 4, [RH, Score=464, Expect=6e-157]; ENSMUSG00000039652, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=457, Expect=2e-158]; ENSMUSG00000111861, Cpeb3, cytoplasmic polyadenylation element binding protein 3, [RH, Score=457, Expect=2e-158]} {Dmel: FBgn0264307, orb2, [RH, Score=462, Expect=1e-156]} {Celegans: WBGene00000770, cpb-1, Cytoplasmic polyadenylation element-binding protein 1, [Score=264, Expect=1e-81]} {Smed: dd_Smed_v6_8889_0_1, dd_Smed_v6_8889_0_1, [RH, Score=466, Expect=7e-163]} {RNA1509_10832, RNA1509_17336} {RNA1310_6139, RNA1509_10832} {RNA1509_10832, RNA815_15725}
3. MligTC455_51378 237 4.94 Mlig455_065169, Mlig455_065171

Neo: -

Age: Up-Down-Up

 GRIN1 1.75 - - 0.794 - - 0.956

Mlig455_065169 {REF} {Length: 3243} {Pfam: Calmodulin-binding domain C0 of NMDA receptor NR1 subunit [PF10562.11, score=45.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=26.7]} {Human: ENSG00000176884, GRIN1, glutamate ionotropic receptor NMDA type subunit 1, [Score=171, Expect=1e-47]} {Mouse: ENSMUSG00000026959, Grin1, glutamate receptor, ionotropic, NMDA1 (zeta 1), [Score=171, Expect=7e-48]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=168, Expect=4e-47]} {Celegans: WBGene00003774, nmr-1, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1, [Score=138, Expect=1e-36]} {Smed: dd_Smed_v6_8187_0_3, dd_Smed_v6_8187_0_3, [RH, Score=248, Expect=4e-77]} {RNA1509_25324} {RNA1310_53103} {RNA815_23220.1}

Mlig455_065171 {REF} {Length: 2901} {Pfam: Calmodulin-binding domain C0 of NMDA receptor NR1 subunit [PF10562.11, score=45.1]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=26.7]} {Human: ENSG00000176884, GRIN1, glutamate ionotropic receptor NMDA type subunit 1, [Score=171, Expect=9e-48]} {Mouse: ENSMUSG00000026959, Grin1, glutamate receptor, ionotropic, NMDA1 (zeta 1), [Score=171, Expect=6e-48]} {Dmel: FBgn0010399, Nmdar1, NMDA receptor 1, [Score=168, Expect=4e-47]} {Celegans: WBGene00003774, nmr-1, NMDA class glutamate Receptor; NMDA-type ionotropic glutamate receptor NMR-1, [Score=138, Expect=1e-36]} {Smed: dd_Smed_v6_8187_0_3, dd_Smed_v6_8187_0_3, [RH, Score=248, Expect=3e-77]} {RNA1509_25324} {RNA1310_53103} {RNA815_23220.1}
4. MligTC455_11208 151 3.14 Mlig455_025101

Neo: -

Age: -

Region-enriched R6: 3.858/0.00018

 PPP1R9A 1.742 - - - 0.972 0.770 - Mlig455_025101 {REF} {Length: 1656} {Pfam: PDZ domain [PF00595.26, score=41.2]; PDZ domain [PF17820.3, score=25.0]} {Human: ENSG00000158528, PPP1R9A, protein phosphatase 1 regulatory subunit 9A, [Score=83.2, Expect=3e-16]} {Mouse: ENSMUSG00000032827, Ppp1r9a, protein phosphatase 1, regulatory subunit 9A, [Score=82.8, Expect=2e-16]} {Dmel: FBgn0010905, Spn, Spinophilin, [Score=82.8, Expect=2e-16]} {Celegans: WBGene00003516, nab-1, NeurABin, [Score=79.7, Expect=1e-15]} {Smed: dd_Smed_v6_4446_0_1, dd_Smed_v6_4446_0_1, [Score=75.9, Expect=2e-14]} {RNA1509_23438} {RNA1310_38599} {RNA815_61482}
5. MligTC455_07028 111 2.32 Mlig455_008885, Mlig455_008990

Neo: -

Age: Up-Down-Down

 KCNB1, KCNC1 1.71 - - - - 0.954 0.756

Mlig455_008885 {REF} {Length: 4331} {Pfam: Ion transport protein [PF00520.33, score=106.1]; BTB/POZ domain [PF02214.24, score=58.3]; Ion channel [PF07885.18, score=54.1]} {Human: ENSG00000158445, KCNB1, potassium voltage-gated channel subfamily B member 1, [Score=211, Expect=1e-56]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=209, Expect=2e-57]; ENSG00000182674, KCNB2, potassium voltage-gated channel subfamily B member 2, [Score=205, Expect=1e-54]; ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=205, Expect=3e-56]} {Mouse: ENSMUSG00000050556, Kcnb1, potassium voltage gated channel, Shab-related subfamily, member 1, [Score=211, Expect=6e-57]; ENSMUSG00000092083, Kcnb2, potassium voltage gated channel, Shab-related subfamily, member 2, [Score=207, Expect=2e-55]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=207, Expect=9e-57]; ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=204, Expect=3e-56]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=217, Expect=6e-61]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=208, Expect=4e-58]} {Smed: dd_Smed_v6_13416_0_1, dd_Smed_v6_13416_0_1, [Score=207, Expect=8e-57]} {RNA1509_26535} {RNA1310_9659.1} {RNA815_18929}

Mlig455_008990 {REF} {Length: 3389} {Pfam: BTB/POZ domain [PF02214.24, score=59.9]; Ion transport protein [PF00520.33, score=19.3]} {Human: ENSG00000129159, KCNC1, potassium voltage-gated channel subfamily C member 1, [Score=80.5, Expect=7e-16]; ENSG00000166006, KCNC2, potassium voltage-gated channel subfamily C member 2, [Score=77.4, Expect=7e-15]} {Mouse: ENSMUSG00000058975, Kcnc1, potassium voltage gated channel, Shaw-related subfamily, member 1, [Score=80.1, Expect=6e-16]; ENSMUSG00000035681, Kcnc2, potassium voltage gated channel, Shaw-related subfamily, member 2, [Score=77.0, Expect=7e-15]} {Dmel: FBgn0003386, Shaw, Shaker cognate w, [Score=88.2, Expect=8e-19]} {Celegans: WBGene00001202, egl-36, Potassium voltage-gated channel protein egl-36, [Score=87.4, Expect=1e-18]} {Smed: dd_Smed_v6_42862_0_1, dd_Smed_v6_42862_0_1, [Score=148, Expect=2e-41]} {RNA1509_26535} {RNA1310_9659.1} {RNA815_18929}
6. MligTC455_20385 320 6.67 Mlig455_026192

Neo: -

Age: -

Region-enriched R8: 3.215/0.01738
Region-enriched R7: 2.779/0.00840

 1.683 - - - 0.978 - 0.705 Mlig455_026192 {REF} {Length: 6207} {Smed: dd_Smed_v6_14319_0_1, dd_Smed_v6_14319_0_1, [RH, Score=79.0, Expect=1e-16]} {RNA1509_51615} {RNA1310_6888, RNA1509_51615} {RNA1509_51615, RNA815_13531.1}
7. MligTC455_50738 141 2.95 Mlig455_053327

Neo: -

Age: logFC(26M/2M)=0.489

 MXI1 0.975 - - - - - 0.975 Mlig455_053327 {REF} {Length: 3210} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=40.0]} {Human: ENSG00000119950, MXI1, MAX interactor 1, dimerization protein, [Score=58.2, Expect=3e-09]} {Mouse: ENSMUSG00000001156, Mxd1, MAX dimerization protein 1, [Score=60.1, Expect=3e-10]; ENSMUSG00000025025, Mxi1, MAX interactor 1, dimerization protein, [Score=58.9, Expect=1e-09]} {Dmel: FBgn0023215, Mnt, [Score=50.4, Expect=8e-07]} {Celegans: WBGene00003163, mdl-1, MAD-Like; MAD-like-1 homolog, [Score=47.4, Expect=4e-06]} {Smed: dd_Smed_v6_4415_0_1, dd_Smed_v6_4415_0_1, [Score=65.5, Expect=3e-12]} {RNA1509_21599} {RNA1310_15507} {RNA815_5411}
8. MligTC455_20569 89 1.86 Mlig455_050936, Mlig455_067794

Neo: -

Age: -

 ASIC4 0.968 - - - - 0.968 -

Mlig455_050936 {REF} {Length: 3300} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=170.9]} {Human: ENSG00000072182, ASIC4, acid sensing ion channel subunit family member 4, [Score=53.9, Expect=6e-07]; ENSG00000256394, ASIC5, acid sensing ion channel subunit family member 5, [Score=52.8, Expect=1e-06]} {Mouse: ENSMUSG00000033007, Asic4, acid-sensing (proton-gated) ion channel family member 4, [Score=52.4, Expect=1e-06]} {Celegans: WBGene00012116, del-4, DEgenerin Like, [Score=100, Expect=4e-22]} {Smed: dd_Smed_v6_16346_0_1, dd_Smed_v6_16346_0_1, [Score=113, Expect=3e-26]} {RNA1310_32756} {RNA815_27486}

Mlig455_067794 {REF} {Length: 4487} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=102.6]} {Celegans: WBGene00016066, acd-2, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_16346_0_1, dd_Smed_v6_16346_0_1, [Score=75.5, Expect=2e-14]} {RNA1509_43293} {RNA1310_32756} {RNA815_27486}
9. MligTC455_09295 18 0.37 Mlig455_021998

Neo: -

Age: -

 0.966 - - - 0.966 - - Mlig455_021998 {REF} {Length: 1197}
10. MligTC455_40104 165 3.45 Mlig455_008744, Mlig455_008758, Mlig455_035898

Neo: -

Age: -

 KCNMA1 0.966 - - - - - 0.966

Mlig455_008744 {REF} {Length: 4230} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.0]; Ion transport protein [PF00520.33, score=57.1]; Ion channel [PF07885.18, score=55.9]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205, RNA1509_45041} {RNA1509_45041, RNA815_19099}

Mlig455_008758 {REF} {Length: 4229} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=103.9]; Ion transport protein [PF00520.33, score=56.3]; Ion channel [PF07885.18, score=55.6]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [RH, Score=1112, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [RH, Score=1109, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [RH, Score=1199, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [RH, Score=1118, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [RH, Score=1140, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099}

Mlig455_035898 {REF} {Length: 4325} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=104.8]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=578, Expect=0.0]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=574, Expect=0.0]} {Dmel: FBgn0003429, slo, slowpoke, [Score=595, Expect=0.0]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=583, Expect=0.0]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=621, Expect=0.0]} {RNA1509_45041} {RNA1310_2205} {RNA815_19099}
11. MligTC455_15578 382 7.96 Mlig455_029888, Mlig455_063959

Neo: -

Age: Up-Up-Down, logFC(26M/2M)=0.623

 BBOX1 0.96 - - - - - 0.960

Mlig455_029888 {REF} {Length: 1898} {Pfam: Taurine catabolism dioxygenase TauD, TfdA family [PF02668.18, score=124.5]; Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=51.2]} {Human: ENSG00000129151, BBOX1, gamma-butyrobetaine hydroxylase 1, [RH, Score=266, Expect=4e-85]} {Mouse: ENSMUSG00000041660, Bbox1, butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase), [RH, Score=258, Expect=5e-82]} {Dmel: FBgn0030575, CG5321, [RH, Score=249, Expect=2e-78]} {Celegans: WBGene00001522, gbh-1, Probable gamma-butyrobetaine dioxygenase, [RH, Score=190, Expect=5e-56]} {Smed: dd_Smed_v6_42907_0_1, dd_Smed_v6_42907_0_1, [Score=67.0, Expect=2e-12]} {RNA1509_21760} {RNA1310_10122.2, RNA1509_21760} {RNA1509_21760, RNA815_6301.1}

Mlig455_063959 {REF} {Length: 2107} {Pfam: Taurine catabolism dioxygenase TauD, TfdA family [PF02668.18, score=124.2]; Gamma-butyrobetaine hydroxylase-like, N-terminal [PF06155.14, score=50.9]} {Human: ENSG00000129151, BBOX1, gamma-butyrobetaine hydroxylase 1, [RH, Score=265, Expect=1e-84]} {Mouse: ENSMUSG00000041660, Bbox1, butyrobetaine (gamma), 2-oxoglutarate dioxygenase 1 (gamma-butyrobetaine hydroxylase), [RH, Score=258, Expect=4e-82]} {Dmel: FBgn0030575, CG5321, [RH, Score=248, Expect=6e-78]} {Celegans: WBGene00001522, gbh-1, Probable gamma-butyrobetaine dioxygenase, [RH, Score=191, Expect=2e-56]} {Smed: dd_Smed_v6_42907_0_1, dd_Smed_v6_42907_0_1, [Score=67.8, Expect=1e-12]} {RNA1509_21760} {RNA1310_10122.1} {RNA815_6301.1}
12. MligTC455_20866 1464 30.5 Mlig455_024728

Neo: -

Age: Down-Up-Down

Region-enriched R7: 1.588/0.00000
Region-enriched R8: 1.156/0.04882

Regeneration-downregulated BL: -1.801

Regeneration-depleted BL: -1.801

 NPDC1 0.959 - - - - - 0.959 Mlig455_024728 {REF} {Length: 1658} {Pfam: Neural proliferation differentiation control-1 protein (NPDC1) [PF06809.13, score=109.7]} {Human: ENSG00000107281, NPDC1, neural proliferation, differentiation and control 1, [RH, Score=114, Expect=1e-29]} {Mouse: ENSMUSG00000015094, Npdc1, neural proliferation, differentiation and control 1, [RH, Score=110, Expect=2e-28]} {Dmel: FBgn0265182, CG44247, [RH, Score=118, Expect=3e-30]} {Celegans: WBGene00000277, cab-1, [RH, Score=76.3, Expect=8e-16]} {Smed: dd_Smed_v6_2985_0_1, dd_Smed_v6_2985_0_1, [Score=94.0, Expect=5e-23]} {RNA1509_5405} {RNA1310_7418} {RNA815_1669.1}
13. MligTC455_23504 217 4.51 Mlig455_002932

Neo: Int S/G2/M

Age: Up-Down-Up, logFC(26M/2M)=0.353

 MZT1 0.959 - - - 0.959 - - Mlig455_002932 {REF} {Length: 1746} {TRANSSPLICED} {Pfam: Mitotic-spindle organizing gamma-tubulin ring associated [PF12554.10, score=67.3]} {Human: ENSG00000204899, MZT1, mitotic spindle organizing protein 1, [RH, Score=59.7, Expect=2e-12]} {Mouse: ENSMUSG00000033186, Mzt1, mitotic spindle organizing protein 1, [RH, Score=60.8, Expect=4e-13]} {Smed: dd_Smed_v6_3812_0_1, dd_Smed_v6_3812_0_1, [RH, Score=56.6, Expect=5e-12]} {RNA1509_22089, RNA1509_57606} {RNA1310_27443.1, RNA1509_57606} {RNA1509_57606, RNA815_23473}
14. MligTC455_41998 5856 122.01 Mlig455_053397

Neo: -

Age: -

Region-enriched R6: 3.889/0.00000
Region-enriched R2: 2.314/0.01703

 0.955 - - - - 0.955 - Mlig455_053397 {REF} {Length: 1427} {Pfam: Bradykinin [PF06753.14, score=46.7]} {RNA1509_31712, RNA1509_8327} {RNA1310_28972.1, RNA1509_31712} {RNA1509_31712, RNA815_13792.1}
15. MligTC455_41824 194 4.03 Mlig455_048229

Neo: -

Age: -

Region-enriched R2: 3.040/0.03860

 0.954 - - - - - 0.954 Mlig455_048229 {REF} {Length: 769} {RNA1509_49797} {RNA1310_60350, RNA1509_49797} {RNA1509_49797, RNA815_30999}
16. MligTC455_40281 70 1.46 Mlig455_043108

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_043108 {REF} {Length: 1772} {Pfam: TMEM154 protein family [PF15102.8, score=23.3]} {RNA1509_39924} {RNA1310_12761.1} {RNA815_3894.1}
17. MligTC455_23220 56 1.18 Mlig455_060190

Neo: -

Age: -

 ACKR3 0.952 - - - - - 0.952 Mlig455_060190 {REF} {Length: 2108} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=106.0]} {Human: ENSG00000144476, ACKR3, atypical chemokine receptor 3, [RH, Score=99.0, Expect=1e-22]} {Mouse: ENSMUSG00000026180, Cxcr2, chemokine (C-X-C motif) receptor 2, [Score=112, Expect=1e-27]} {Dmel: FBgn0266429, AstA-R1, Allatostatin A receptor 1, [Score=102, Expect=4e-24]} {Celegans: WBGene00021439, ckr-2, CholecystoKinin Receptor homolog; Cholecystokinin receptor 2 splice isoform b, [Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_10325_0_1, dd_Smed_v6_10325_0_1, [Score=81.6, Expect=5e-17]} {RNA1310_66504} {RNA815_39432}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA