Data search
Results for MligTC455_07805
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_07805 | 688 | 14.32 | Mlig455_000060, Mlig455_057252 | Neo: - Age: - |
WDR97 | Mlig455_000060 {REF} {Length: 5357} {Pfam: WD domain, G-beta repeat [PF00400.34, score=58.2]} {Human: ENSG00000179698, WDR97, WD repeat domain 97, [Score=234, Expect=7e-62]} {Mouse: ENSMUSG00000109179, Gm35339, predicted gene, 35339, [Score=156, Expect=8e-38]} {Dmel: FBgn0025725, alphaCOP, Coat Protein (coatomer) alpha, [Score=51.2, Expect=7e-06]} {Celegans: WBGene00270321, Y41C4A.32, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_11828_0_1, dd_Smed_v6_11828_0_1, [Score=384, Expect=1e-111]} {RNA1509_10940} {RNA1310_1415} {RNA815_8779} Mlig455_057252 {REF} {Length: 224} {Human: ENSG00000179698, WDR97, WD repeat domain 97, [Score=62.4, Expect=1e-12]} {Mouse: ENSMUSG00000109179, Gm35339, predicted gene, 35339, [Score=66.6, Expect=2e-14]} {Smed: dd_Smed_v6_11828_0_1, dd_Smed_v6_11828_0_1, [Score=52.0, Expect=1e-09]} {RNA1509_10940} {RNA1310_1415} {RNA815_8779} |
Cumulative graph for MligTC455_07805
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.414 | 4.063 | 0.31265 | 0.96169 | |
| RegionR2 | 1.351 | 4.063 | 0.00968 | 0.09860 | |
| RegionR3 | 0.101 | 4.063 | 0.81361 | 1.00000 | |
| RegionR4 | -0.31 | 4.063 | 0.55367 | 0.87398 | |
| RegionR5 | -0.264 | 4.063 | 0.52846 | 0.89079 | |
| RegionR6 | 0.593 | 4.063 | 0.15992 | 0.71251 | |
| RegionR7 | -1.15 | 4.063 | 0.09604 | 0.59368 | |
| RegionR8 | 1.094 | 4.063 | 0.07629 | 0.52684 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 1.306 | 4.063 | 0.47255 | 1.00000 | |
| RegenerationR2 | 0.064 | 4.063 | 0.87039 | 1.00000 | |
| RegenerationR3 | 0.331 | 4.063 | 0.47611 | 0.84738 | |
| RegenerationR4 | -0.167 | 4.063 | 0.72996 | 0.96441 | |
| RegenerationR5 | -0.273 | 4.063 | 0.54396 | 0.88262 | |
| RegenerationR6 | -0.333 | 4.063 | 0.47083 | 0.78503 | |
| RegenerationBL | 0.488 | 4.063 | 0.34919 | 0.71658 | |
| RegenerationTP | -0.888 | 4.063 | 0.21921 | 0.66235 |
Genes with expression patterns similar to MligTC455_07805
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_07805 | 688 | 14.32 | Mlig455_000060, Mlig455_057252 | Neo: - Age: - |
WDR97 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_000060 {REF} {Length: 5357} {Pfam: WD domain, G-beta repeat [PF00400.34, score=58.2]} {Human: ENSG00000179698, WDR97, WD repeat domain 97, [Score=234, Expect=7e-62]} {Mouse: ENSMUSG00000109179, Gm35339, predicted gene, 35339, [Score=156, Expect=8e-38]} {Dmel: FBgn0025725, alphaCOP, Coat Protein (coatomer) alpha, [Score=51.2, Expect=7e-06]} {Celegans: WBGene00270321, Y41C4A.32, [Score=56.6, Expect=4e-08]} {Smed: dd_Smed_v6_11828_0_1, dd_Smed_v6_11828_0_1, [Score=384, Expect=1e-111]} {RNA1509_10940} {RNA1310_1415} {RNA815_8779} Mlig455_057252 {REF} {Length: 224} {Human: ENSG00000179698, WDR97, WD repeat domain 97, [Score=62.4, Expect=1e-12]} {Mouse: ENSMUSG00000109179, Gm35339, predicted gene, 35339, [Score=66.6, Expect=2e-14]} {Smed: dd_Smed_v6_11828_0_1, dd_Smed_v6_11828_0_1, [Score=52.0, Expect=1e-09]} {RNA1509_10940} {RNA1310_1415} {RNA815_8779} |
| 2. | MligTC455_30348 | 10872 | 226.5 | Mlig455_022281 | Neo: - Age: Up-Down-Up |
TUBB4B | 2.576 | - | - | - | 0.896 | 0.717 | 0.963 | Mlig455_022281 {REF} {Length: 1685} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=232.0]; Tubulin C-terminal domain [PF03953.19, score=144.9]; Misato Segment II tubulin-like domain [PF10644.11, score=24.4]} {Human: ENSG00000188229, TUBB4B, tubulin beta 4B class IVb, [RH, Score=922, Expect=0.0]; ENSG00000137285, TUBB2B, tubulin beta 2B class IIb, [RH, Score=910, Expect=0.0]; ENSG00000104833, TUBB4A, tubulin beta 4A class IVa, [RH, Score=908, Expect=0.0]; ENSG00000227739, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000196230, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232421, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000224156, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000235067, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000183311, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000229684, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000232575, TUBB, tubulin beta class I, [RH, Score=905, Expect=0.0]; ENSG00000137267, TUBB2A, tubulin beta 2A class IIa, [RH, Score=905, Expect=0.0]} {Mouse: ENSMUSG00000036752, Tubb4b, tubulin, beta 4B class IVB, [RH, Score=922, Expect=0.0]; ENSMUSG00000045136, Tubb2b, tubulin, beta 2B class IIB, [RH, Score=910, Expect=0.0]; ENSMUSG00000062591, Tubb4a, tubulin, beta 4A class IVA, [RH, Score=908, Expect=0.0]; ENSMUSG00000058672, Tubb2a, tubulin, beta 2A class IIA, [RH, Score=905, Expect=0.0]; ENSMUSG00000001525, Tubb5, tubulin, beta 5 class I, [RH, Score=905, Expect=0.0]} {Dmel: FBgn0284243, betaTub56D, beta-Tubulin at 56D, [RH, Score=863, Expect=0.0]} {Celegans: WBGene00006538, tbb-4, Tubulin beta-4 chain, [RH, Score=860, Expect=0.0]} {Smed: dd_Smed_v6_83_0_3, dd_Smed_v6_83_0_3, [RH, Score=919, Expect=0.0]} {RNA1509_21, RNA1509_4990} {RNA1310_17208, RNA1509_4990} {RNA1509_4990, RNA815_4202.1} |
| 3. | MligTC455_45843 | 4759 | 99.14 | Mlig455_054096 | Neo: - |
1.804 | - | - | - | 0.854 | - | 0.950 | Mlig455_054096 {REF} {Length: 2587} {Smed: dd_Smed_v6_5981_0_1, dd_Smed_v6_5981_0_1, [RH, Score=80.9, Expect=4e-17]} {RNA1509_639} {RNA1310_9589.1, RNA1509_639} {RNA1509_639, RNA815_3156} | |
| 4. | MligTC455_51042 | 2813 | 58.6 | Mlig455_024763, Mlig455_068658 | Neo: - Age: Down-Up-Up Regeneration-upregulated BL: 1.067 Regeneration-enriched BL: 1.067 |
RBM38 | 1.7 | - | 0.730 | - | - | 0.970 | - | Mlig455_024763 {REF} {Length: 2020} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=65.1]; RNA recognition motif [PF16367.7, score=20.1]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=149, Expect=5e-44]; ENSG00000112183, RBM24, RNA binding motif protein 24, [RH, Score=148, Expect=2e-43]} {Mouse: ENSMUSG00000038132, Rbm24, RNA binding motif protein 24, [RH, Score=147, Expect=4e-43]; ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=146, Expect=8e-43]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=73.6, Expect=1e-14]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=167, Expect=6e-51]} {Smed: dd_Smed_v6_11304_0_1, dd_Smed_v6_11304_0_1, [RH, Score=174, Expect=2e-53]} {RNA1509_4417} {RNA1310_12671.2} {RNA815_6387.1} Mlig455_068658 {REF} {Length: 2135} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=65.0]; RNA recognition motif [PF16367.7, score=20.0]} {Human: ENSG00000132819, RBM38, RNA binding motif protein 38, [RH, Score=150, Expect=5e-44]; ENSG00000112183, RBM24, RNA binding motif protein 24, [RH, Score=148, Expect=2e-43]} {Mouse: ENSMUSG00000038132, Rbm24, RNA binding motif protein 24, [RH, Score=147, Expect=4e-43]; ENSMUSG00000027510, Rbm38, RNA binding motif protein 38, [RH, Score=146, Expect=9e-43]} {Dmel: FBgn0260943, Rbp6, RNA-binding protein 6, [Score=73.2, Expect=1e-14]} {Celegans: WBGene00006321, sup-12, SUPpressor, [RH, Score=167, Expect=5e-51]} {Smed: dd_Smed_v6_11304_0_1, dd_Smed_v6_11304_0_1, [RH, Score=174, Expect=2e-53]} {RNA1509_4417} {RNA1310_12671.1, RNA1509_4417} {RNA1509_4417, RNA815_6387.1} |
| 5. | MligTC455_53513 | 1255 | 26.15 | Mlig455_028733 | Neo: - Age: logFC(26M/2M)=-0.303 Region-enriched R2: 1.279/0.01798 |
IFT172 | 0.977 | - | - | - | - | - | 0.977 | Mlig455_028733 {REF} {Length: 5542} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=39.2]; Region in Clathrin and VPS [PF00637.22, score=37.8]; WD domain, G-beta repeat [PF00400.34, score=31.8]; Tetratricopeptide repeat [PF13176.8, score=29.3]; Coatomer WD associated region [PF04053.16, score=21.1]} {Human: ENSG00000138002, IFT172, intraflagellar transport 172, [RH, Score=2013, Expect=0.0]} {Mouse: ENSMUSG00000038564, Ift172, intraflagellar transport 172, [RH, Score=2020, Expect=0.0]} {Dmel: FBgn0035317, Oseg2, Outer segment 2, [RH, Score=1459, Expect=0.0]} {Celegans: WBGene00003883, osm-1, Intraflagellar transport protein osm-1, [RH, Score=1306, Expect=0.0]} {Smed: dd_Smed_v6_10638_0_1, dd_Smed_v6_10638_0_1, [RH, Score=1736, Expect=0.0]} {RNA1509_20015, RNA1509_2378} {RNA1310_994, RNA1509_20015, RNA1509_2378} {RNA1509_20015, RNA1509_2378, RNA815_250} |
| 6. | MligTC455_01224 | 39 | 0.82 | Mlig455_025513 | Neo: - Age: - |
0.973 | - | - | - | - | 0.973 | - | Mlig455_025513 {REF} {Length: 240} {NoTransDecoderORF} | |
| 7. | MligTC455_51951 | 80 | 1.67 | Mlig455_039069 | Neo: - Age: - |
0.971 | - | - | - | - | 0.971 | - | Mlig455_039069 {REF} {Length: 1636} {TRANSSPLICED} {RNA1310_35048} {RNA815_19493} | |
| 8. | MligTC455_09428 | 1119 | 23.32 | Mlig455_024321, Mlig455_024377 | Neo: - Age: - |
0.97 | - | - | - | - | - | 0.970 | Mlig455_024321 {REF} {Length: 1822} {TRANSSPLICED} {Pfam: Mitotic checkpoint protein [PF05557.15, score=19.0]} {Smed: dd_Smed_v6_11072_0_1, dd_Smed_v6_11072_0_1, [Score=78.2, Expect=2e-15]} {RNA1509_37043} {RNA1310_13592} {RNA815_15407} Mlig455_024377 {REF} {Length: 3598} {TRANSSPLICED} {Pfam: Mitotic checkpoint protein [PF05557.15, score=18.9]} {Smed: dd_Smed_v6_11072_0_1, dd_Smed_v6_11072_0_1, [Score=78.2, Expect=2e-15]} {RNA1509_37043} {RNA1310_13592, RNA1509_37043} {RNA1509_37043, RNA815_15407} |
|
| 9. | MligTC455_45161 | 29 | 0.6 | Mlig455_027613 | Neo: Irradiation Age: - |
WSCD2 | 0.97 | - | - | - | - | 0.970 | - | Mlig455_027613 {REF} {Length: 1427} {Pfam: WSC domain [PF01822.21, score=56.9]; PAN domain [PF00024.28, score=21.6]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=54.3, Expect=4e-08]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=56.6, Expect=4e-09]} {Dmel: FBgn0015360, oxt, peptide O-xylosyltransferase, [Score=61.2, Expect=8e-11]} {Celegans: WBGene00005024, sqv-6, Xylosyltransferase sqv-6, [Score=52.8, Expect=4e-08]} {RNA1509_29094} {RNA1310_36326} {RNA815_27950.1} |
| 10. | MligTC455_34285 | 182 | 3.79 | Mlig455_029837 | Neo: - Age: - Region-enriched R4: 3.268/0.00673 |
0.967 | - | - | - | - | 0.967 | - | Mlig455_029837 {REF} {Length: 2097} {TRANSSPLICED} {Pfam: PKC-activated protein phosphatase-1 inhibitor [PF05361.14, score=45.3]} {Dmel: FBgn0032297, CG17124, [RH, Score=85.1, Expect=2e-22]} {Smed: dd_Smed_v6_6245_0_1, dd_Smed_v6_6245_0_1, [RH, Score=81.3, Expect=3e-21]} {RNA1509_28546, RNA1509_37788} {RNA1310_20897, RNA1509_28546, RNA1509_37788} {RNA1509_28546, RNA1509_37788, RNA815_19369.2} | |
| 11. | MligTC455_31947 | 130 | 2.71 | Mlig455_027667 | Neo: Int S/G2/M Age: - |
0.964 | - | - | - | - | 0.964 | - | Mlig455_027667 {REF} {Length: 3211} {TRANSSPLICED} {RNA1509_21281} {RNA1310_16403.1} {RNA815_2223.1} | |
| 12. | MligTC455_48974 | 124 | 2.58 | Mlig455_055974 | Neo: - Age: - Regeneration-upregulated BL: 5.064 Regeneration-enriched BL: 5.064 |
0.961 | - | - | - | - | 0.961 | - | Mlig455_055974 {REF} {Length: 739} {NoTransDecoderORF} {RNA1310_50966} {RNA815_42094} | |
| 13. | MligTC455_22562 | 62 | 1.28 | Mlig455_004519 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_004519 {REF} {Length: 131} {NoTransDecoderORF} {RNA1310_25912.1} {RNA815_57017} | |
| 14. | MligTC455_52845 | 257 | 5.35 | Mlig455_026037 | Neo: Int S/G2/M Age: - |
PHF12 | 0.955 | - | - | - | - | 0.955 | - | Mlig455_026037 {REF} {Length: 2833} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=51.8]} {Human: ENSG00000109118, PHF12, PHD finger protein 12, [Score=92.4, Expect=6e-19]} {Mouse: ENSMUSG00000037791, Phf12, PHD finger protein 12, [Score=91.7, Expect=6e-19]} {Dmel: FBgn0029861, CG3815, [Score=103, Expect=7e-23]} {Celegans: WBGene00008081, athp-1, AT Hook plus PHD finger transcription factor, [Score=70.1, Expect=3e-12]} {Smed: dd_Smed_v6_11130_0_1, dd_Smed_v6_11130_0_1, [Score=137, Expect=3e-34]} {RNA1509_39252} {RNA1310_6431} {RNA815_9255} |
| 15. | MligTC455_16272 | 170 | 3.54 | Mlig455_042206 | Neo: - |
TRPM1 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_042206 {REF} {Length: 3835} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=68.4]; Ankyrin repeats (many copies) [PF13637.8, score=65.1]; Ankyrin repeats (many copies) [PF13857.8, score=59.8]; Ankyrin repeat [PF13606.8, score=56.1]; Ion transport protein [PF00520.33, score=50.9]; Ankyrin repeat [PF00023.32, score=37.8]} {Human: ENSG00000274965, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=123, Expect=9e-28]; ENSG00000134160, TRPM1, transient receptor potential cation channel subfamily M member 1, [Score=123, Expect=8e-28]} {Mouse: ENSMUSG00000030523, Trpm1, transient receptor potential cation channel, subfamily M, member 1, [Score=125, Expect=2e-28]} {Dmel: FBgn0005614, trpl, transient receptor potential-like, [Score=71.2, Expect=5e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=95.1, Expect=2e-19]} {Smed: dd_Smed_v6_8382_0_1, dd_Smed_v6_8382_0_1, [Score=199, Expect=4e-52]} {RNA1509_2368} {RNA1310_977, RNA1509_2368} {RNA1509_2368, RNA815_2896} |
| 16. | MligTC455_25194 | 218 | 4.55 | Mlig455_057371 | Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.674 Region-enriched R3: 1.742/0.04295 |
KY | 0.951 | - | - | - | 0.951 | - | - | Mlig455_057371 {REF} {Length: 5685} {Human: ENSG00000174611, KY, kyphoscoliosis peptidase, [Score=80.1, Expect=1e-14]} {Mouse: ENSMUSG00000035606, Ky, kyphoscoliosis peptidase, [Score=84.0, Expect=7e-16]} {Dmel: FBgn0050147, Hil, Hillarin, [Score=82.8, Expect=1e-15]} {Celegans: WBGene00003089, ltd-1, Lim and Transglutaminase Domain; Lim and transglutaminase domain protein, [Score=70.9, Expect=5e-12]} {Smed: dd_Smed_v6_1109_0_1, dd_Smed_v6_1109_0_1, [Score=95.9, Expect=9e-20]} {RNA1509_6021} {RNA1310_875.2} {RNA815_349} |
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