Data search
Results for MligTC455_08100
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_08100 | 25 | 0.52 | Mlig455_016439 | Neo: - Age: - |
Mlig455_016439 {REF} {Length: 1194} {NoTransDecoderORF} |
Cumulative graph for MligTC455_08100
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | - | - | - | - | |
| RegionR2 | - | - | - | - | |
| RegionR3 | - | - | - | - | |
| RegionR4 | - | - | - | - | |
| RegionR5 | - | - | - | - | |
| RegionR6 | - | - | - | - | |
| RegionR7 | - | - | - | - | |
| RegionR8 | - | - | - | - |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | - | - | - | - | |
| RegenerationR2 | - | - | - | - | |
| RegenerationR3 | - | - | - | - | |
| RegenerationR4 | - | - | - | - | |
| RegenerationR5 | - | - | - | - | |
| RegenerationR6 | - | - | - | - | |
| RegenerationBL | - | - | - | - | |
| RegenerationTP | - | - | - | - |
Genes with expression patterns similar to MligTC455_08100
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_08100 | 25 | 0.52 | Mlig455_016439 | Neo: - Age: - |
1 | - | - | - | - | - | 1.000 | Mlig455_016439 {REF} {Length: 1194} {NoTransDecoderORF} | |
| 2. | MligTC455_17563 | 30 | 0.62 | Mlig455_024249 | Neo: - Age: - |
MEOX1 | 0.974 | - | - | - | - | - | 0.974 | Mlig455_024249 {REF} {Length: 1506} {Pfam: Homeodomain [PF00046.31, score=77.2]} {Human: ENSG00000005102, MEOX1, mesenchyme homeobox 1, [RH, Score=105, Expect=2e-27]; ENSG00000106511, MEOX2, mesenchyme homeobox 2, [RH, Score=104, Expect=1e-26]} {Mouse: ENSMUSG00000001493, Meox1, mesenchyme homeobox 1, [RH, Score=104, Expect=2e-27]; ENSMUSG00000036144, Meox2, mesenchyme homeobox 2, [RH, Score=103, Expect=1e-26]} {Dmel: FBgn0014949, btn, buttonless, [RH, Score=102, Expect=1e-27]} {Celegans: WBGene00000436, ceh-12, Homeobox protein ceh-12, [Score=79.7, Expect=9e-19]} {Smed: dd_Smed_v6_12317_0_1, dd_Smed_v6_12317_0_1, [RH, Score=99.4, Expect=4e-25]} {RNA1310_43427.1} |
| 3. | MligTC455_40769 | 26 | 0.54 | Mlig455_007570 | Neo: - Age: - |
SIX1 | 0.972 | - | - | - | - | - | 0.972 | Mlig455_007570 {REF} {Length: 3034} {Pfam: Transcriptional regulator, SIX1, N-terminal SD domain [PF16878.7, score=158.1]; Homeodomain [PF00046.31, score=52.2]; Homeobox KN domain [PF05920.13, score=46.6]} {Human: ENSG00000126778, SIX1, SIX homeobox 1, [RH, Score=343, Expect=3e-116]; ENSG00000170577, SIX2, SIX homeobox 2, [RH, Score=341, Expect=4e-115]} {Mouse: ENSMUSG00000051367, Six1, sine oculis-related homeobox 1, [RH, Score=343, Expect=2e-116]; ENSMUSG00000024134, Six2, sine oculis-related homeobox 2, [RH, Score=342, Expect=1e-115]} {Dmel: FBgn0003460, so, sine oculis, [RH, Score=343, Expect=1e-114]} {Celegans: WBGene00000454, ceh-33, Homeobox protein ceh-33, [RH, Score=254, Expect=3e-82]} {Smed: dd_Smed_v6_9774_0_1, dd_Smed_v6_9774_0_1, [RH, Score=357, Expect=5e-119]} {RNA1509_55511} {RNA1310_57635} {RNA815_51085} |
| 4. | MligTC455_11384 | 4 | 0.09 | Mlig455_040084 | Neo: - Age: - |
0.958 | - | - | - | - | - | 0.958 | Mlig455_040084 {REF} {Length: 1998} {NoTransDecoderORF} {RNA1509_13168} {RNA1310_31893} {RNA815_24542} | |
| 5. | MligTC455_25109 | 692 | 14.41 | Mlig455_011813 | Neo: Germline Age: Down-Up-Down, logFC(26M/2M)=0.263 Region-enriched R5: 4.103/0.00000 |
0.952 | - | - | - | - | - | 0.952 | Mlig455_011813 {REF} {Length: 2866} {RNA1509_2109, RNA1509_54398} {RNA1310_50308, RNA1509_54398} {RNA1509_54398, RNA815_8058.1} |
Berezikov Lab - 2020-2021 © ERIBA