Data search
Results for MligTC455_08140
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_08140 | 408 | 8.51 | Mlig455_004848 | Neo: - Age: - |
FRMD6 | Mlig455_004848 {REF} {Length: 6104} {Pfam: FERM central domain [PF00373.20, score=40.4]; FERM N-terminal domain [PF09379.12, score=24.7]; FERM C-terminal PH-like domain [PF09380.12, score=24.4]} {Human: ENSG00000139926, FRMD6, FERM domain containing 6, [RH, Score=117, Expect=1e-26]} {Mouse: ENSMUSG00000048285, Frmd6, FERM domain containing 6, [RH, Score=123, Expect=1e-28]} {Smed: dd_Smed_v6_11160_0_1, dd_Smed_v6_11160_0_1, [RH, Score=152, Expect=5e-38]} {RNA1509_16478, RNA1509_32339, RNA1509_51194} {RNA1310_13533, RNA1509_16478, RNA1509_32339, RNA1509_51194} {RNA1509_16478, RNA1509_32339, RNA1509_51194, RNA815_9082} |
Cumulative graph for MligTC455_08140
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.791 | 3.566 | 0.58816 | 1.00000 | |
| RegionR2 | -0.221 | 3.566 | 0.68995 | 1.00000 | |
| RegionR3 | 1.041 | 3.566 | 0.01158 | 0.16906 | |
| RegionR4 | 1.128 | 3.566 | 0.04238 | 0.17224 | |
| RegionR5 | 1.049 | 3.566 | 0.00858 | 0.05163 | |
| RegionR6 | 0.269 | 3.566 | 0.55508 | 1.00000 | |
| RegionR7 | -1.54 | 3.566 | 0.03551 | 0.35877 | |
| RegionR8 | -0.934 | 3.566 | 0.22443 | 0.83342 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.748 | 3.566 | 0.26963 | 0.97333 | |
| RegenerationR2 | -0.504 | 3.566 | 0.25942 | 0.70613 | |
| RegenerationR3 | -0.831 | 3.566 | 0.07132 | 0.44712 | |
| RegenerationR4 | -0.15 | 3.566 | 0.77032 | 0.97676 | |
| RegenerationR5 | -0.552 | 3.566 | 0.20509 | 0.63799 | |
| RegenerationR6 | -0.273 | 3.566 | 0.59298 | 0.86525 | |
| RegenerationBL | -0.908 | 3.566 | 0.27432 | 0.63436 | |
| RegenerationTP | 0.661 | 3.566 | 0.36854 | 0.80639 |
Genes with expression patterns similar to MligTC455_08140
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_08140 | 408 | 8.51 | Mlig455_004848 | Neo: - Age: - |
FRMD6 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_004848 {REF} {Length: 6104} {Pfam: FERM central domain [PF00373.20, score=40.4]; FERM N-terminal domain [PF09379.12, score=24.7]; FERM C-terminal PH-like domain [PF09380.12, score=24.4]} {Human: ENSG00000139926, FRMD6, FERM domain containing 6, [RH, Score=117, Expect=1e-26]} {Mouse: ENSMUSG00000048285, Frmd6, FERM domain containing 6, [RH, Score=123, Expect=1e-28]} {Smed: dd_Smed_v6_11160_0_1, dd_Smed_v6_11160_0_1, [RH, Score=152, Expect=5e-38]} {RNA1509_16478, RNA1509_32339, RNA1509_51194} {RNA1310_13533, RNA1509_16478, RNA1509_32339, RNA1509_51194} {RNA1509_16478, RNA1509_32339, RNA1509_51194, RNA815_9082} |
| 2. | MligTC455_47225 | 366 | 7.63 | Mlig455_055544 | Neo: - Age: - |
RAB9A | 1.679 | - | - | - | - | 0.720 | 0.959 | Mlig455_055544 {REF} {Length: 4152} {TRANSSPLICED} {Pfam: Ras family [PF00071.24, score=172.3]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=111.6]; ADP-ribosylation factor family [PF00025.23, score=38.8]; Gtr1/RagA G protein conserved region [PF04670.14, score=22.4]; RsgA GTPase [PF03193.18, score=21.5]; 50S ribosome-binding GTPase [PF01926.25, score=19.9]} {Human: ENSG00000123595, RAB9A, RAB9A, member RAS oncogene family, [RH, Score=192, Expect=7e-62]; ENSG00000123570, RAB9B, RAB9B, member RAS oncogene family, [RH, Score=192, Expect=9e-62]} {Mouse: ENSMUSG00000079316, Rab9, RAB9, member RAS oncogene family, [RH, Score=194, Expect=1e-62]; ENSMUSG00000043463, Rab9b, RAB9B, member RAS oncogene family, [RH, Score=191, Expect=2e-61]} {Dmel: FBgn0032782, Rab9, [RH, Score=191, Expect=1e-60]} {Celegans: WBGene00004271, rab-7, RAB family, [Score=153, Expect=1e-46]} {Smed: dd_Smed_v6_6588_0_1, dd_Smed_v6_6588_0_1, [RH, Score=158, Expect=3e-48]} {RNA1509_32195, RNA1509_39673, RNA1509_41228} {RNA1310_41092, RNA1509_32195, RNA1509_41228} {RNA1509_32195, RNA1509_41228, RNA815_29088} |
| 3. | MligTC455_23257 | 429 | 8.94 | Mlig455_048632 | Neo: - Age: logFC(26M/2M)=-0.515 Region-enriched R4: 3.681/0.00001 |
0.985 | - | - | - | - | - | 0.985 | Mlig455_048632 {REF} {Length: 6170} {Pfam: BRCA1 C Terminus (BRCT) domain [PF00533.28, score=24.7]; BRCT domain, a BRCA1 C-terminus domain [PF16589.7, score=20.5]} {RNA1509_8517} {RNA1310_2320.1} {RNA815_744} | |
| 4. | MligTC455_12078 | 129 | 2.69 | Mlig455_066996 | Neo: - Age: - |
NPEPPS | 0.958 | - | - | - | - | 0.958 | - | Mlig455_066996 {REF} {Length: 2825} {TRANSSPLICED} {Pfam: Peptidase family M1 domain [PF01433.22, score=291.9]; ERAP1-like C-terminal domain [PF11838.10, score=270.0]; Peptidase M1 N-terminal domain [PF17900.3, score=161.8]} {Human: ENSG00000141279, NPEPPS, aminopeptidase puromycin sensitive, [Score=831, Expect=0.0]} {Mouse: ENSMUSG00000001441, Npepps, aminopeptidase puromycin sensitive, [Score=836, Expect=0.0]} {Dmel: FBgn0261243, Psa, Puromycin sensitive aminopeptidase, [Score=774, Expect=0.0]} {Celegans: WBGene00003914, pam-1, Aminopeptidase, [Score=571, Expect=0.0]} {Smed: dd_Smed_v6_1249_0_1, dd_Smed_v6_1249_0_1, [RH, Score=756, Expect=0.0]} {RNA1509_18469} {RNA1310_4424} {RNA815_16654} |
| 5. | MligTC455_22920 | 196 | 4.08 | Mlig455_039387 | Neo: - Age: - |
TRPC4 | 0.958 | - | - | - | - | - | 0.958 | Mlig455_039387 {REF} {Length: 2289} {Human: ENSG00000133107, TRPC4, transient receptor potential cation channel subfamily C member 4, [Score=62.4, Expect=2e-10]} {Mouse: ENSMUSG00000027748, Trpc4, transient receptor potential cation channel, subfamily C, member 4, [Score=63.5, Expect=6e-11]} {Dmel: FBgn0032593, Trpgamma, Transient receptor potential cation channel gamma, [Score=98.6, Expect=6e-23]} {Smed: dd_Smed_v6_20495_0_1, dd_Smed_v6_20495_0_1, [Score=155, Expect=1e-42]} {RNA1509_26602} {RNA1310_3579} {RNA815_924} |
| 6. | MligTC455_32753 | 687 | 14.31 | Mlig455_053740 | Neo: - |
SYNRG | 0.958 | - | - | - | - | - | 0.958 | Mlig455_053740 {REF} {Length: 4156} {TRANSSPLICED} {Human: ENSG00000274047, SYNRG, synergin gamma, [RH, Score=82.8, Expect=3e-15]; ENSG00000275066, SYNRG, synergin gamma, [RH, Score=82.8, Expect=3e-15]} {Mouse: ENSMUSG00000034940, Synrg, synergin, gamma, [RH, Score=81.3, Expect=5e-15]} {Celegans: WBGene00011218, R10E11.6, [RH, Score=65.5, Expect=6e-11]} {Smed: dd_Smed_v6_8044_0_1, dd_Smed_v6_8044_0_1, [RH, Score=71.2, Expect=2e-12]} {RNA1509_13094} {RNA1310_2948.1} {RNA815_2849} |
| 7. | MligTC455_39337 | 938 | 19.53 | Mlig455_039998 | Neo: - Age: logFC(26M/2M)=-0.274 |
NR1I2 | 0.955 | - | - | - | - | - | 0.955 | Mlig455_039998 {REF} {Length: 6281} {TRANSSPLICED} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=65.3]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=80.5, Expect=2e-15]; ENSG00000143257, NR1I3, nuclear receptor subfamily 1 group I member 3, [Score=79.0, Expect=2e-15]; ENSG00000196482, ESRRG, estrogen related receptor gamma, [Score=77.0, Expect=2e-14]; ENSG00000173153, ESRRA, estrogen related receptor alpha, [Score=77.0, Expect=2e-14]} {Mouse: ENSMUSG00000005677, Nr1i3, nuclear receptor subfamily 1, group I, member 3, [Score=82.4, Expect=1e-16]} {Dmel: FBgn0015240, Hr96, Hormone receptor-like in 96, [Score=85.1, Expect=5e-17]} {Celegans: WBGene00003607, nhr-8, Nuclear hormone receptor family member nhr-8, [Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_14067_0_2, dd_Smed_v6_14067_0_2, [RH, Score=94.0, Expect=5e-20]} {RNA1509_24367, RNA1509_36420, RNA1509_3835, RNA1509_43631, RNA1509_45925, RNA1509_55162, RNA1509_59667} {RNA1310_4758.2, RNA1509_24367, RNA1509_36420, RNA1509_3835, RNA1509_43631, RNA1509_45925, RNA1509_55162, RNA1509_59667} {RNA1509_24367, RNA1509_36420, RNA1509_3835, RNA1509_43631, RNA1509_45925, RNA1509_55162, RNA1509_59667, RNA815_2117} |
| 8. | MligTC455_36893 | 144 | 3 | Mlig455_014086 | Neo: - Age: Down-Down-Up |
0.954 | - | - | - | - | - | 0.954 | Mlig455_014086 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.9]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=26.1]} {RNA1509_56729} {RNA1310_13361} {RNA815_13112} |
Berezikov Lab - 2020-2021 © ERIBA