Data search
Results for MligTC455_36893
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_36893 | 144 | 3.00 | Mlig455_014086 | Neo: - Age: Down-Down-Up |
Mlig455_014086 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.9]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=26.1]} {RNA1509_56729} {RNA1310_13361} {RNA815_13112} |
Cumulative graph for MligTC455_36893
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.727 | 2.396 | 0.77612 | 1.00000 | |
| RegionR2 | 0.063 | 2.396 | 0.95399 | 1.00000 | |
| RegionR3 | -0.185 | 2.396 | 0.81804 | 1.00000 | |
| RegionR4 | 0.112 | 2.396 | 0.89624 | 1.00000 | |
| RegionR5 | 0.071 | 2.396 | 0.92270 | 1.00000 | |
| RegionR6 | -0.357 | 2.396 | 0.66594 | 1.00000 | |
| RegionR7 | 0.301 | 2.396 | 0.76367 | 1.00000 | |
| RegionR8 | 0.722 | 2.396 | 0.54387 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -4.615 | 2.396 | 0.48668 | 1.00000 | |
| RegenerationR2 | 0.643 | 2.396 | 0.40000 | 0.81434 | |
| RegenerationR3 | -0.728 | 2.396 | 0.41634 | 0.81279 | |
| RegenerationR4 | -0.146 | 2.396 | 0.86741 | 1.00000 | |
| RegenerationR5 | -0.116 | 2.396 | 0.88154 | 1.00000 | |
| RegenerationR6 | 0.624 | 2.396 | 0.49335 | 0.80101 | |
| RegenerationBL | -1.626 | 2.396 | 0.21009 | 0.55332 | |
| RegenerationTP | -2.456 | 2.396 | 0.07728 | 0.44403 |
Genes with expression patterns similar to MligTC455_36893
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_36893 | 144 | 3 | Mlig455_014086 | Neo: - Age: Down-Down-Up |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_014086 {REF} {Length: 2062} {TRANSSPLICED} {Pfam: C2H2-type zinc finger [PF13894.8, score=26.9]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=26.1]} {RNA1509_56729} {RNA1310_13361} {RNA815_13112} | |
| 2. | MligTC455_36892 | 196 | 4.09 | Mlig455_014059 | Neo: - Age: - |
5.401 | 0.960 | 0.966 | 0.823 | 0.965 | 0.981 | 0.706 | Mlig455_014059 {REF} {Length: 1934} {RNA1509_56729} {RNA1310_13361} {RNA815_23265} | |
| 3. | MligTC455_21647 | 792 | 16.5 | Mlig455_002380, Mlig455_044554 | Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.277 Region-enriched R4: 2.190/0.01220 |
HELT | 0.974 | - | - | - | - | 0.974 | - | Mlig455_002380 {REF} {Length: 2483} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=49.3]} {Human: ENSG00000187821, HELT, helt bHLH transcription factor, [RH, Score=80.5, Expect=7e-17]} {Mouse: ENSMUSG00000047171, Helt, helt bHLH transcription factor, [RH, Score=80.1, Expect=7e-17]} {Dmel: FBgn0259938, cwo, clockwork orange, [Score=82.8, Expect=6e-17]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=65.5, Expect=7e-12]} {RNA1509_45131} {RNA1310_22639, RNA1509_45131} {RNA1509_45131, RNA815_9348} Mlig455_044554 {REF} {Length: 2524} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=49.3]} {Human: ENSG00000187821, HELT, helt bHLH transcription factor, [Score=78.2, Expect=4e-16]} {Mouse: ENSMUSG00000047171, Helt, helt bHLH transcription factor, [Score=77.4, Expect=5e-16]} {Dmel: FBgn0259938, cwo, clockwork orange, [Score=82.4, Expect=7e-17]} {Smed: dd_Smed_v6_22479_0_1, dd_Smed_v6_22479_0_1, [Score=65.5, Expect=6e-12]} {RNA1509_45131, RNA1509_52656} {RNA1310_22639, RNA1509_52656} {RNA1509_52656, RNA815_9348} |
| 4. | MligTC455_28562 | 165 | 3.44 | Mlig455_042324, Mlig455_047105 | Neo: - Age: - |
INPP1 | 0.958 | - | - | 0.958 | - | - | - | Mlig455_042324 {REF} {Length: 2884} {Pfam: Inositol monophosphatase family [PF00459.27, score=115.6]} {Human: ENSG00000151689, INPP1, inositol polyphosphate-1-phosphatase, [RH, Score=270, Expect=6e-87]} {Mouse: ENSMUSG00000026102, Inpp1, inositol polyphosphate-1-phosphatase, [RH, Score=305, Expect=1e-100]} {Dmel: FBgn0016672, Ipp, Inositol polyphosphate 1-phosphatase, [RH, Score=243, Expect=3e-77]} {Celegans: WBGene00044063, bpnt-1, 3'(2'), 5'-BisPhosphate NucleoTidase 1 homolog, [Score=76.3, Expect=3e-15]} {Smed: dd_Smed_v6_9612_0_1, dd_Smed_v6_9612_0_1, [Score=182, Expect=1e-53]} {RNA1509_47975} {RNA1310_24152, RNA1509_47975} {RNA1509_47975, RNA815_18809} Mlig455_047105 {REF} {Length: 2512} {Pfam: Inositol monophosphatase family [PF00459.27, score=115.6]} {Human: ENSG00000151689, INPP1, inositol polyphosphate-1-phosphatase, [RH, Score=270, Expect=6e-87]} {Mouse: ENSMUSG00000026102, Inpp1, inositol polyphosphate-1-phosphatase, [RH, Score=305, Expect=1e-100]} {Dmel: FBgn0016672, Ipp, Inositol polyphosphate 1-phosphatase, [RH, Score=243, Expect=3e-77]} {Celegans: WBGene00044063, bpnt-1, 3'(2'), 5'-BisPhosphate NucleoTidase 1 homolog, [Score=76.3, Expect=3e-15]} {Smed: dd_Smed_v6_9612_0_1, dd_Smed_v6_9612_0_1, [Score=182, Expect=1e-53]} {RNA1509_47975} {RNA1310_24152} {RNA815_18809} |
| 5. | MligTC455_08140 | 408 | 8.51 | Mlig455_004848 | Neo: - Age: - |
FRMD6 | 0.954 | - | - | - | - | - | 0.954 | Mlig455_004848 {REF} {Length: 6104} {Pfam: FERM central domain [PF00373.20, score=40.4]; FERM N-terminal domain [PF09379.12, score=24.7]; FERM C-terminal PH-like domain [PF09380.12, score=24.4]} {Human: ENSG00000139926, FRMD6, FERM domain containing 6, [RH, Score=117, Expect=1e-26]} {Mouse: ENSMUSG00000048285, Frmd6, FERM domain containing 6, [RH, Score=123, Expect=1e-28]} {Smed: dd_Smed_v6_11160_0_1, dd_Smed_v6_11160_0_1, [RH, Score=152, Expect=5e-38]} {RNA1509_16478, RNA1509_32339, RNA1509_51194} {RNA1310_13533, RNA1509_16478, RNA1509_32339, RNA1509_51194} {RNA1509_16478, RNA1509_32339, RNA1509_51194, RNA815_9082} |