Data search


search
Exact
Search

Results for MligTC455_08324

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08324 738 15.37 Mlig455_060730

Neo: Int S/G2/M

Age: Up-Down-Up

ROMO1 Mlig455_060730 {REF} {Length: 1252} {TRANSSPLICED} {Pfam: Reactive mitochondrial oxygen species modulator 1 [PF10247.11, score=80.5]} {Human: ENSG00000125995, ROMO1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=3e-23]} {Mouse: ENSMUSG00000067847, Romo1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=2e-23]} {Dmel: FBgn0036488, CG6878, [RH, Score=87.8, Expect=4e-24]} {Smed: dd_Smed_v6_691_0_1, dd_Smed_v6_691_0_1, [RH, Score=76.6, Expect=6e-20]} {RNA1509_26926} {RNA1310_46637} {RNA815_29226.1}

Cumulative graph for MligTC455_08324

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -8.181 4.249 0.00623 0.24452
RegionR2 2.228 4.249 0.00375 0.05319
RegionR3 1.611 4.249 0.01925 0.23130
RegionR4 0.146 4.249 0.79051 1.00000
RegionR5 1.428 4.249 0.02978 0.12888
RegionR6 1.453 4.249 0.04316 0.38918
RegionR7 -0.004 4.249 0.85427 1.00000
RegionR8 1.32 4.249 0.22345 0.83133

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 8.551 4.249 0.00713 0.39519
RegenerationR2 -1.4 4.249 0.00467 0.10602
RegenerationR3 -0.957 4.249 0.06226 0.42148
RegenerationR4 -0.812 4.249 0.10772 0.50575
RegenerationR5 -1.017 4.249 0.03633 0.31568
RegenerationR6 -0.745 4.249 0.14753 0.47053
RegenerationBL 0.331 4.249 0.59540 0.94396
RegenerationTP -1.193 4.249 0.13141 0.54504


Genes with expression patterns similar to MligTC455_08324

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08324 738 15.37 Mlig455_060730

Neo: Int S/G2/M

Age: Up-Down-Up

ROMO1 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_060730 {REF} {Length: 1252} {TRANSSPLICED} {Pfam: Reactive mitochondrial oxygen species modulator 1 [PF10247.11, score=80.5]} {Human: ENSG00000125995, ROMO1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=3e-23]} {Mouse: ENSMUSG00000067847, Romo1, reactive oxygen species modulator 1, [RH, Score=86.7, Expect=2e-23]} {Dmel: FBgn0036488, CG6878, [RH, Score=87.8, Expect=4e-24]} {Smed: dd_Smed_v6_691_0_1, dd_Smed_v6_691_0_1, [RH, Score=76.6, Expect=6e-20]} {RNA1509_26926} {RNA1310_46637} {RNA815_29226.1}
2. MligTC455_38362 1015 21.16 Mlig455_045508

Neo: -

Age: -

Region-enriched R4: 1.693/0.01745
Region-enriched R5: 1.163/0.02906

AADAC 1.796 - 0.953 - - 0.843 - Mlig455_045508 {REF} {Length: 2224} {Pfam: alpha/beta hydrolase fold [PF07859.15, score=113.1]; Carboxylesterase family [PF00135.30, score=19.9]} {Human: ENSG00000114771, AADAC, arylacetamide deacetylase, [Score=96.3, Expect=2e-21]; ENSG00000197953, AADACL2, arylacetamide deacetylase like 2, [Score=93.6, Expect=2e-20]; ENSG00000261846, AADACL2, arylacetamide deacetylase like 2, [Score=93.6, Expect=2e-20]} {Mouse: ENSMUSG00000090527, Gm5538, predicted gene 5538, [Score=102, Expect=1e-23]; ENSMUSG00000095522, Gm8298, predicted gene 8298, [Score=98.2, Expect=3e-22]} {Dmel: FBgn0034491, Hsl, Hormone-sensitive lipase, [Score=65.5, Expect=4e-11]} {Celegans: WBGene00012810, nceh-1, Neutral Cholesterol Ester Hydrolase homolog, [Score=98.2, Expect=2e-22]} {Smed: dd_Smed_v6_4674_0_1, dd_Smed_v6_4674_0_1, [Score=82.0, Expect=5e-17]} {RNA1509_14307} {RNA1310_15560.2} {RNA815_8354}
3. MligTC455_40876 1006 20.96 Mlig455_028183

Neo: -

Age: Down-Up-Down

Region-enriched R4: 1.153/0.01519
Region-enriched R3: 1.090/0.00901

ETHE1 1.729 - 0.778 - - 0.951 - Mlig455_028183 {REF} {Length: 1716} {TRANSSPLICED} {Pfam: Metallo-beta-lactamase superfamily [PF00753.29, score=45.0]} {Human: ENSG00000105755, ETHE1, ETHE1, persulfide dioxygenase, [RH, Score=323, Expect=6e-112]} {Mouse: ENSMUSG00000064254, Ethe1, ethylmalonic encephalopathy 1, [RH, Score=321, Expect=4e-111]} {Dmel: FBgn0050022, CG30022, [RH, Score=292, Expect=2e-99]} {Celegans: WBGene00007886, ethe-1, ETHE1 (Human ETHylmalonic Encephalopathy) homolog, [RH, Score=286, Expect=1e-97]} {Smed: dd_Smed_v6_944_0_1, dd_Smed_v6_944_0_1, [RH, Score=318, Expect=2e-110]} {RNA1509_7310} {RNA1310_16001.1} {RNA815_19195}
4. MligTC455_17727 4189 87.27 Mlig455_057688, Mlig455_059984

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-1.941

Region-enriched R6: 2.088/0.01181
Region-enriched R5: 1.460/0.04298

0.954 - - - - 0.954 -

Mlig455_057688 {REF} {Length: 980} {RNA1509_889} {RNA1310_48596} {RNA815_26649}

Mlig455_059984 {REF} {Length: 988} {RNA1509_14511, RNA1509_20501, RNA1509_889} {RNA1310_48596, RNA1509_14511, RNA1509_20501, RNA1509_889} {RNA1509_14511, RNA1509_20501, RNA1509_889, RNA815_26649}
5. MligTC455_26049 5227 108.9 Mlig455_026021

Neo: -

Age: -

GCSH 0.952 - - - - 0.952 - Mlig455_026021 {REF} {Length: 2584} {Pfam: Glycine cleavage H-protein [PF01597.21, score=143.1]} {Human: ENSG00000140905, GCSH, glycine cleavage system protein H, [RH, Score=125, Expect=3e-36]} {Mouse: ENSMUSG00000034424, Gcsh, glycine cleavage system protein H (aminomethyl carrier), [RH, Score=128, Expect=8e-38]} {Dmel: FBgn0027945, ppl, pumpless, [RH, Score=120, Expect=6e-35]} {Celegans: WBGene00009918, gcsh-2, Glycine cleavage system H protein, [RH, Score=124, Expect=1e-36]} {Smed: dd_Smed_v6_1939_0_1, dd_Smed_v6_1939_0_1, [RH, Score=138, Expect=2e-42]} {RNA1509_15537, RNA1509_1611, RNA1509_8346} {RNA1310_18409.1, RNA1509_15537, RNA1509_1611, RNA1509_8346} {RNA1509_15537, RNA1509_1611, RNA1509_8346, RNA815_7854}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA