TomoSeq data search

Data search

Results for MligTC455_08366

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_08366

4082

85.04

Mlig455_049130

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.310

DYNLRB1

Mlig455_049130 {REF} {Length: 964} {Pfam: Roadblock/LC7 domain [PF03259.19, score=79.3]; Ragulator complex protein LAMTOR5 [PF16672.7, score=22.4]} {Human: ENSG00000125971, DYNLRB1, dynein light chain roadblock-type 1, [RH, Score=137, Expect=2e-43]; ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=3e-41]} {Mouse: ENSMUSG00000047459, Dynlrb1, dynein light chain roadblock-type 1, [RH, Score=134, Expect=3e-42]; ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=134, Expect=4e-42]} {Dmel: FBgn0024196, robl, roadblock, [Score=132, Expect=1e-41]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=98.6, Expect=2e-28]} {Smed: dd_Smed_v6_5440_0_1, dd_Smed_v6_5440_0_1, [RH, Score=133, Expect=4e-42]} {RNA1509_19902, RNA1509_2355, RNA1509_6206} {RNA1310_34984, RNA1509_19902, RNA1509_2355, RNA1509_6206} {RNA1509_19902, RNA1509_2355, RNA1509_6206, RNA815_17288.1}

Cumulative graph for MligTC455_08366

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.071	6.542	0.03427	0.46303
RegionR2	0.323	6.542	0.20076	0.56162
RegionR3	0.35	6.542	0.09748	0.54802
RegionR4	0.799	6.542	0.00142	0.01369
RegionR5	0.212	6.542	0.30989	0.64838
RegionR6	0.061	6.542	0.78129	1.00000
RegionR7	-0.257	6.542	0.30598	0.94036
RegionR8	-0.416	6.542	0.15910	0.72204

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.233	6.542	0.74434	1.00000
RegenerationR2	-0.375	6.542	0.12029	0.53915
RegenerationR3	-0.334	6.542	0.19556	0.63087
RegenerationR4	-0.451	6.542	0.08824	0.46606
RegenerationR5	-0.32	6.542	0.21498	0.64990
RegenerationR6	-0.863	6.542	0.00162	0.04487
RegenerationBL	-0.887	6.542	0.00201	0.03621
RegenerationTP	-0.57	6.542	0.06043	0.39845

Genes with expression patterns similar to MligTC455_08366

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_08366	4082	85.04	Mlig455_049130	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.310	DYNLRB1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_049130 {REF} {Length: 964} {Pfam: Roadblock/LC7 domain [PF03259.19, score=79.3]; Ragulator complex protein LAMTOR5 [PF16672.7, score=22.4]} {Human: ENSG00000125971, DYNLRB1, dynein light chain roadblock-type 1, [RH, Score=137, Expect=2e-43]; ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=3e-41]} {Mouse: ENSMUSG00000047459, Dynlrb1, dynein light chain roadblock-type 1, [RH, Score=134, Expect=3e-42]; ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=134, Expect=4e-42]} {Dmel: FBgn0024196, robl, roadblock, [Score=132, Expect=1e-41]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=98.6, Expect=2e-28]} {Smed: dd_Smed_v6_5440_0_1, dd_Smed_v6_5440_0_1, [RH, Score=133, Expect=4e-42]} {RNA1509_19902, RNA1509_2355, RNA1509_6206} {RNA1310_34984, RNA1509_19902, RNA1509_2355, RNA1509_6206} {RNA1509_19902, RNA1509_2355, RNA1509_6206, RNA815_17288.1}
2.	MligTC455_08365	2725	56.78	Mlig455_049105	Neo: - Age: -	DYNLRB1	3.559	-	0.781	0.913	0.978	-	0.887	Mlig455_049105 {REF} {Length: 862} {Pfam: Roadblock/LC7 domain [PF03259.19, score=79.3]; Ragulator complex protein LAMTOR5 [PF16672.7, score=22.4]} {Human: ENSG00000125971, DYNLRB1, dynein light chain roadblock-type 1, [RH, Score=137, Expect=2e-43]; ENSG00000168589, DYNLRB2, dynein light chain roadblock-type 2, [RH, Score=132, Expect=3e-41]} {Mouse: ENSMUSG00000047459, Dynlrb1, dynein light chain roadblock-type 1, [RH, Score=134, Expect=3e-42]; ENSMUSG00000034467, Dynlrb2, dynein light chain roadblock-type 2, [RH, Score=134, Expect=4e-42]} {Dmel: FBgn0024196, robl, roadblock, [Score=132, Expect=1e-41]} {Celegans: WBGene00012004, dyrb-1, Dynein light chain roadblock, [RH, Score=98.6, Expect=2e-28]} {Smed: dd_Smed_v6_5440_0_1, dd_Smed_v6_5440_0_1, [RH, Score=133, Expect=4e-42]} {RNA1509_6206} {RNA1310_34984} {RNA815_17288.1}
3.	MligTC455_52129	3929	81.86	Mlig455_011780, Mlig455_013012, Mlig455_013041	Neo: - Age: Down-Up-Up Region-enriched R4: 1.012/0.02624	CALM2	3.507	-	-	0.910	0.903	0.743	0.951	Mlig455_011780 {REF} {Length: 754} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=60.7]; EF-hand domain pair [PF13833.8, score=47.6]; EF hand [PF00036.34, score=39.8]; EF-hand domain [PF13405.8, score=33.6]; EF-hand domain [PF14658.8, score=30.4]; EF hand [PF13202.8, score=29.3]; EF-hand domain [PF08976.13, score=20.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=136, Expect=9e-41]; ENSG00000160014, CALM3, calmodulin 3, [Score=134, Expect=3e-40]; ENSG00000198668, CALM1, calmodulin 1, [Score=134, Expect=2e-40]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=136, Expect=2e-41]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=135, Expect=2e-40]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=134, Expect=2e-40]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=134, Expect=2e-40]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=132, Expect=5e-40]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=132, Expect=3e-40]} {Smed: dd_Smed_v6_10239_0_1, dd_Smed_v6_10239_0_1, [RH, Score=138, Expect=3e-42]} {RNA1509_7925} {RNA1310_37112.2} {RNA815_24030} Mlig455_013012 {REF} {Length: 765} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=60.7]; EF-hand domain pair [PF13833.8, score=47.6]; EF hand [PF00036.34, score=39.8]; EF-hand domain [PF13405.8, score=33.6]; EF-hand domain [PF14658.8, score=30.4]; EF hand [PF13202.8, score=29.3]; EF-hand domain [PF08976.13, score=20.5]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=136, Expect=9e-41]; ENSG00000160014, CALM3, calmodulin 3, [Score=134, Expect=3e-40]; ENSG00000198668, CALM1, calmodulin 1, [Score=134, Expect=2e-40]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=136, Expect=2e-41]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=135, Expect=2e-40]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=134, Expect=2e-40]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=134, Expect=2e-40]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=132, Expect=5e-40]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=132, Expect=3e-40]} {Smed: dd_Smed_v6_10239_0_1, dd_Smed_v6_10239_0_1, [RH, Score=138, Expect=3e-42]} {RNA1509_7925} {RNA1310_37112.2} {RNA815_24030} Mlig455_013041 {REF} {Length: 786} {TRANSSPLICED} {Pfam: EF-hand domain pair [PF13499.8, score=60.1]; EF-hand domain pair [PF13833.8, score=47.6]; EF hand [PF00036.34, score=38.5]; EF-hand domain [PF13405.8, score=34.4]; EF-hand domain [PF14658.8, score=29.1]; EF hand [PF13202.8, score=28.7]; EF-hand domain [PF08976.13, score=20.4]} {Human: ENSG00000143933, CALM2, calmodulin 2, [Score=136, Expect=8e-41]; ENSG00000160014, CALM3, calmodulin 3, [Score=134, Expect=3e-40]; ENSG00000198668, CALM1, calmodulin 1, [Score=134, Expect=2e-40]} {Mouse: ENSMUSG00000063130, Calml3, calmodulin-like 3, [Score=136, Expect=2e-41]; ENSMUSG00000001175, Calm1, calmodulin 1, [Score=135, Expect=2e-40]; ENSMUSG00000036438, Calm2, calmodulin 2, [Score=134, Expect=2e-40]; ENSMUSG00000019370, Calm3, calmodulin 3, [Score=134, Expect=2e-40]} {Dmel: FBgn0000253, Cam, Calmodulin, [Score=132, Expect=4e-40]} {Celegans: WBGene00000552, cmd-1, Calmodulin, [Score=132, Expect=3e-40]} {Smed: dd_Smed_v6_10239_0_1, dd_Smed_v6_10239_0_1, [RH, Score=137, Expect=7e-42]} {RNA1509_20533, RNA1509_7925} {RNA1310_37112.2, RNA1509_20533, RNA1509_7925} {RNA1509_20533, RNA1509_7925, RNA815_24030}
4.	MligTC455_20365	2559	53.3	Mlig455_002848	Neo: - Age: logFC(26M/2M)=-0.276 Regeneration-downregulated BL: -1.317 Regeneration-depleted BL: -1.317	C17orf98	3.339	-	0.775	-	0.811	0.793	0.960	Mlig455_002848 {REF} {Length: 1484} {Pfam: Domain of unknown function (DUF4542) [PF15075.8, score=129.0]; Transcription factor IIA, alpha/beta subunit [PF03153.15, score=20.9]} {Human: ENSG00000275489, C17orf98, chromosome 17 open reading frame 98, [RH, Score=101, Expect=2e-26]; ENSG00000276913, C17orf98, chromosome 17 open reading frame 98, [RH, Score=101, Expect=2e-26]} {Mouse: ENSMUSG00000018543, 1700001P01Rik, RIKEN cDNA 1700001P01 gene, [Score=95.5, Expect=2e-24]} {Smed: dd_Smed_v6_9687_0_1, dd_Smed_v6_9687_0_1, [RH, Score=176, Expect=7e-56]} {RNA1509_10250, RNA1509_13459, RNA1509_4099, RNA1509_7327} {RNA1310_32570.1, RNA1509_10250, RNA1509_13459, RNA1509_4099, RNA1509_7327} {RNA1509_10250, RNA1509_13459, RNA1509_4099, RNA1509_7327, RNA815_13443.1}
5.	MligTC455_35205	586	12.21	Mlig455_041626	Neo: - Age: - Region-enriched R2: 1.740/0.01659	KIF1B	1.792	-	-	-	0.956	-	0.836	Mlig455_041626 {REF} {Length: 4699} {Pfam: Kinesin motor domain [PF00225.25, score=294.3]; Microtubule binding [PF16796.7, score=66.4]; Kinesin protein 1B [PF12423.10, score=35.6]; FHA domain [PF00498.28, score=29.1]; First C2 domain of RPGR-interacting protein 1 [PF11618.10, score=23.8]; XH domain [PF03469.16, score=20.7]} {Human: ENSG00000054523, KIF1B, kinesin family member 1B, [Score=343, Expect=1e-98]; ENSG00000118193, KIF14, kinesin family member 14, [Score=343, Expect=3e-99]; ENSG00000130294, KIF1A, kinesin family member 1A, [Score=336, Expect=1e-96]; ENSG00000197892, KIF13B, kinesin family member 13B, [Score=327, Expect=3e-98]} {Mouse: ENSMUSG00000087236, Kif28, kinesin family member 28, [Score=526, Expect=1e-170]} {Dmel: FBgn0019968, Khc-73, Kinesin heavy chain 73, [Score=342, Expect=1e-98]} {Celegans: WBGene00002218, klp-6, Kinesin-like protein, [Score=717, Expect=0.0]} {Smed: dd_Smed_v6_12573_0_1, dd_Smed_v6_12573_0_1, [Score=518, Expect=2e-168]} {RNA1509_2295} {RNA1310_3322.1} {RNA815_1060}
6.	MligTC455_19760	6101	127.11	Mlig455_004980, Mlig455_005294	Neo: - Age: logFC(26M/2M)=-0.196	DNAI1	1.71	-	-	0.755	-	-	0.955	Mlig455_004980 {REF} {Length: 2735} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.3]} {Human: ENSG00000122735, DNAI1, dynein axonemal intermediate chain 1, [RH, Score=773, Expect=0.0]} {Mouse: ENSMUSG00000061322, Dnaic1, dynein, axonemal, intermediate chain 1, [RH, Score=773, Expect=0.0]} {Dmel: FBgn0034566, CG9313, [RH, Score=522, Expect=1e-176]} {Celegans: WBGene00015927, dyci-1, DYnein Chain, light Intermediate, [Score=112, Expect=9e-26]} {Smed: dd_Smed_v6_4753_0_1, dd_Smed_v6_4753_0_1, [RH, Score=858, Expect=0.0]} {RNA1509_16663, RNA1509_31620, RNA1509_34544, RNA1509_36463, RNA1509_40409, RNA1509_41706, RNA1509_51014} {RNA1310_13300.1, RNA1509_16663, RNA1509_31620, RNA1509_34544, RNA1509_36463, RNA1509_40409, RNA1509_41706} {RNA1509_16663, RNA1509_31620, RNA1509_34544, RNA1509_36463, RNA1509_40409, RNA1509_41706, RNA815_2412.1} Mlig455_005294 {REF} {Length: 2692} {Pfam: WD domain, G-beta repeat [PF00400.34, score=34.6]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=29.5]} {Human: ENSG00000122735, DNAI1, dynein axonemal intermediate chain 1, [RH, Score=772, Expect=0.0]} {Mouse: ENSMUSG00000061322, Dnaic1, dynein, axonemal, intermediate chain 1, [RH, Score=772, Expect=0.0]} {Dmel: FBgn0034566, CG9313, [RH, Score=525, Expect=6e-178]} {Celegans: WBGene00015927, dyci-1, DYnein Chain, light Intermediate, [Score=112, Expect=9e-26]} {Smed: dd_Smed_v6_4753_0_1, dd_Smed_v6_4753_0_1, [RH, Score=860, Expect=0.0]} {RNA1509_51014} {RNA1310_13300.1} {RNA815_2412.1}
7.	MligTC455_43791	1365	28.43	Mlig455_044501	Neo: - Age: logFC(26M/2M)=-0.753 Region-enriched R2: 1.262/0.02262	CAPSL	1.682	-	-	-	-	0.950	0.732	Mlig455_044501 {REF} {Length: 1977} {TRANSSPLICED} {Pfam: EF-hand domain [PF13405.8, score=66.4]; EF-hand domain pair [PF13499.8, score=64.1]; EF hand [PF00036.34, score=59.3]; EF hand [PF13202.8, score=45.3]; EF-hand domain pair [PF13833.8, score=40.6]} {Human: ENSG00000152611, CAPSL, calcyphosine like, [RH, Score=271, Expect=8e-93]} {Mouse: ENSMUSG00000039676, Capsl, calcyphosine-like, [RH, Score=280, Expect=2e-96]} {Dmel: FBgn0051345, CG31345, [RH, Score=244, Expect=1e-82]} {Celegans: WBGene00019770, M04F3.4, [Score=50.4, Expect=6e-08]} {Smed: dd_Smed_v6_4512_0_1, dd_Smed_v6_4512_0_1, [RH, Score=290, Expect=1e-100]} {RNA1509_16154, RNA1509_16210, RNA1509_5158} {RNA1310_25986.1, RNA1509_16154, RNA1509_16210, RNA1509_5158} {RNA1509_16154, RNA1509_16210, RNA1509_5158, RNA815_11323}
8.	MligTC455_16150	267	5.56	Mlig455_057692	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.781	KLHDC8A	0.959	-	-	-	-	-	0.959	Mlig455_057692 {REF} {Length: 1684} {Pfam: Kelch motif [PF13964.8, score=56.8]; Kelch motif [PF01344.27, score=52.7]; Kelch motif [PF07646.17, score=36.4]; Galactose oxidase, central domain [PF13418.8, score=35.1]; Kelch motif [PF13854.8, score=27.6]} {Human: ENSG00000162873, KLHDC8A, kelch domain containing 8A, [Score=58.5, Expect=3e-09]} {Mouse: ENSMUSG00000042115, Klhdc8a, kelch domain containing 8A, [Score=63.5, Expect=1e-10]} {Smed: dd_Smed_v6_14507_0_1, dd_Smed_v6_14507_0_1, [RH, Score=209, Expect=3e-63]} {RNA1509_58319, RNA1509_58644} {RNA1310_20213, RNA1509_58319, RNA1509_58644} {RNA1509_58319, RNA1509_58644, RNA815_8052}

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