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Results for MligTC455_08514

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08514 12 0.25 Mlig455_025008

Neo: -

Age: logFC(26M/2M)=-0.797

 Mlig455_025008 {REF} {Length: 1457} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=34.8]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=124, Expect=7e-33]} {RNA1509_29748} {RNA1310_35120.1} {RNA815_13547.1}

Cumulative graph for MligTC455_08514

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -5.678 0.768 1.00000 1.00000
RegionR2 2.51 0.768 1.00000 1.00000
RegionR3 -0.252 0.768 0.99949 1.00000
RegionR4 2.041 0.768 0.99964 1.00000
RegionR5 -0.344 0.768 1.00000 1.00000
RegionR6 -0.164 0.768 1.00000 1.00000
RegionR7 2.415 0.768 0.99982 1.00000
RegionR8 -0.527 0.768 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 4.537 0.768 0.99996 1.00000
RegenerationR2 1.3 0.768 0.99996 1.00000
RegenerationR3 3.686 0.768 0.06558 0.43093
RegenerationR4 0.631 0.768 0.12513 0.53813
RegenerationR5 1.469 0.768 1.00000 1.00000
RegenerationR6 2.65 0.768 0.99994 1.00000
RegenerationBL 1.267 0.768 0.99998 1.00000
RegenerationTP 1.124 0.768 0.99999 1.00000


Genes with expression patterns similar to MligTC455_08514

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08514 12 0.25 Mlig455_025008

Neo: -

Age: logFC(26M/2M)=-0.797

 2 1.000 1.000 - - - - Mlig455_025008 {REF} {Length: 1457} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=34.8]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=124, Expect=7e-33]} {RNA1509_29748} {RNA1310_35120.1} {RNA815_13547.1}
2. MligTC455_09076 32 0.66 Mlig455_011956

Neo: -

Age: -

 1.934 0.982 0.952 - - - - Mlig455_011956 {REF} {Length: 738} {RNA1509_39566} {RNA1310_47180} {RNA815_26826}
3. MligTC455_07598 25 0.52 Mlig455_065401

Neo: Germline

Age: -

 1.923 0.976 0.947 - - - - Mlig455_065401 {REF} {Length: 887} {RNA1509_32641} {RNA1310_46097.1} {RNA815_53182}
4. MligTC455_50999 138 2.88 Mlig455_011626

Neo: Germline

Age: -

Region-specific R4: 6.249

Region-enriched R4: 5.077/0.00002

 1.906 0.977 0.929 - - - - Mlig455_011626 {REF} {Length: 1131} {RNA1509_26603} {RNA1310_28356} {RNA815_27303.1}
5. MligTC455_03074 52 1.09 Mlig455_006716

Neo: Irradiation

Age: logFC(26M/2M)=-0.505

Region-specific R4: 7.083

Region-enriched R4: 6.241/0.00001

 1.903 0.953 0.950 - - - - Mlig455_006716 {REF} {Length: 1491} {RNA1509_37401} {RNA1310_30754} {RNA815_10474.1}
6. MligTC455_07357 24 0.5 Mlig455_032505, Mlig455_068683

Neo: Germline

Age: -

Region-enriched R4: 3.658/0.01665

 1.903 0.937 0.966 - - - -

Mlig455_032505 {REF} {Length: 566} {RNA1310_46436}

Mlig455_068683 {REF} {Length: 895} {RNA1310_46436} {RNA815_49083}
7. MligTC455_31927 52 1.09 Mlig455_068193

Neo: -

Age: -

Region-enriched R4: 3.790/0.04231

 1.902 0.936 0.966 - - - - Mlig455_068193 {REF} {Length: 2308} {Pfam: Helitron helicase-like domain at N-terminus [PF14214.8, score=121.9]} {Celegans: WBGene00019136, F59H6.5, [Score=147, Expect=3e-38]} {RNA1509_52720} {RNA1310_63836, RNA1509_52720} {RNA1509_52720, RNA815_1650.1}
8. MligTC455_29801 18 0.37 Mlig455_036199

Neo: Irradiation

Age: Up-Down-Down

 SCNN1B 1.902 0.944 0.958 - - - - Mlig455_036199 {REF} {Length: 3178} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=184.5]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=65.5, Expect=2e-10]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=67.0, Expect=3e-11]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=104, Expect=2e-23]} {RNA1509_47645} {RNA1310_11333.1} {RNA815_9471.1}
9. MligTC455_09129 32 0.66 Mlig455_059421

Neo: Germline

Age: -

Region-enriched R4: 5.564/0.00001

 1.899 0.993 0.906 - - - - Mlig455_059421 {REF} {Length: 741} {RNA1509_46948} {RNA1310_47642} {RNA815_53017}
10. MligTC455_26958 189 3.93 Mlig455_025861

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.270

Region-enriched R4: 3.517/0.00002

 TTLL10 1.898 0.970 0.928 - - - - Mlig455_025861 {REF} {Length: 2020} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=74.6]; YheC/D like ATP-grasp [PF14398.8, score=25.9]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=81.6, Expect=8e-16]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=93.2, Expect=6e-20]} {Dmel: FBgn0031853, TTLL3B, Tubulin tyrosine ligase-like 3B, [Score=57.4, Expect=2e-08]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=50.8, Expect=1e-06]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=94.0, Expect=2e-20]} {RNA1509_34167, RNA1509_9761} {RNA1310_8353, RNA1509_34167} {RNA1509_34167, RNA815_12498}
11. MligTC455_15165 89 1.85 Mlig455_022783, Mlig455_022968

Neo: Germline

Age: Up-Down-Down

 1.894 0.971 0.923 - - - -

Mlig455_022783 {REF} {Length: 2666} {RNA1509_18736} {RNA1310_8003} {RNA815_10990}

Mlig455_022968 {REF} {Length: 2631} {RNA1509_18736} {RNA1310_8003} {RNA815_14495}
12. MligTC455_33451 55 1.15 Mlig455_061693

Neo: Germline

Age: Down-Down-Up

 1.894 0.967 0.927 - - - - Mlig455_061693 {REF} {Length: 1301} {Pfam: Family of unknown function (DUF6453) [PF20051.1, score=19.4]} {RNA1509_47001} {RNA1310_55207.1} {RNA815_29866}
13. MligTC455_27324 118 2.45 Mlig455_045818

Neo: Irradiation

Age: Up-Down-Up

Region-enriched R4: 4.088/0.01215

 ANKRA2 1.886 0.963 0.923 - - - - Mlig455_045818 {REF} {Length: 2713} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=46.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.6]; Ankyrin repeat [PF13606.8, score=33.7]; Ankyrin repeats (many copies) [PF13857.8, score=26.4]; Ankyrin repeat [PF00023.32, score=24.1]} {Human: ENSG00000164331, ANKRA2, ankyrin repeat family A member 2, [Score=50.8, Expect=8e-07]; ENSG00000085185, BCORL1, BCL6 corepressor like 1, [Score=50.1, Expect=2e-06]; ENSG00000145362, ANK2, ankyrin 2, [Score=49.7, Expect=4e-06]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=53.5, Expect=1e-07]; ENSMUSG00000036959, Bcorl1, BCL6 co-repressor-like 1, [Score=51.6, Expect=4e-07]} {Dmel: FBgn0086898, dgo, diego, [Score=57.4, Expect=4e-09]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=66.6, Expect=2e-12]} {RNA1509_52102} {RNA1310_40022} {RNA815_16446}
14. MligTC455_46681 175 3.65 Mlig455_036558

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.860

Region-enriched R4: 4.278/0.00287

 1.886 0.956 0.930 - - - - Mlig455_036558 {REF} {Length: 2084} {RNA1509_7069} {RNA1310_10173} {RNA815_15925}
15. MligTC455_08326 353 7.35 Mlig455_005158, Mlig455_021620

Neo: Irradiation

Age: Up-Down-Down

 TTLL10 1.88 0.962 0.918 - - - -

Mlig455_005158 {REF} {Length: 2011} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=103.7]; YheC/D like ATP-grasp [PF14398.8, score=40.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=18.7]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=115, Expect=8e-27]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=114, Expect=2e-26]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=84.3, Expect=8e-17]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=52.4, Expect=5e-07]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=129, Expect=7e-32]} {RNA1509_8225} {RNA1310_13837} {RNA815_5594}

Mlig455_021620 {REF} {Length: 2010} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=103.7]; YheC/D like ATP-grasp [PF14398.8, score=40.0]; Sugar-transfer associated ATP-grasp [PF14397.8, score=18.7]} {Human: ENSG00000162571, TTLL10, tubulin tyrosine ligase like 10, [Score=115, Expect=8e-27]} {Mouse: ENSMUSG00000029074, Ttll10, tubulin tyrosine ligase-like family, member 10, [Score=114, Expect=2e-26]} {Dmel: FBgn0031854, TTLL3A, Tubulin tyrosine ligase-like 3A, [Score=84.3, Expect=8e-17]} {Celegans: WBGene00014232, ttll-4, Tubulin polyglutamylase ttll-4, [Score=52.4, Expect=5e-07]} {Smed: dd_Smed_v6_9664_0_1, dd_Smed_v6_9664_0_1, [Score=129, Expect=7e-32]} {RNA1509_8225} {RNA1310_13837, RNA1509_8225} {RNA1509_8225, RNA815_5594}
16. MligTC455_08451 610 12.7 Mlig455_040784, Mlig455_040837, Mlig455_064619

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 4.649/0.00050

 ITSN1 1.88 0.951 0.929 - - - -

Mlig455_040784 {REF} {Length: 3690} {Pfam: RhoGEF domain [PF00621.22, score=86.4]} {Human: ENSG00000205726, ITSN1, intersectin 1, [Score=73.2, Expect=9e-13]; ENSG00000146426, TIAM2, T cell lymphoma invasion and metastasis 2, [Score=70.5, Expect=6e-12]} {Mouse: ENSMUSG00000022957, Itsn1, intersectin 1 (SH3 domain protein 1A), [Score=73.2, Expect=2e-13]; ENSMUSG00000023800, Tiam2, T cell lymphoma invasion and metastasis 2, [Score=71.2, Expect=3e-12]} {Dmel: FBgn0035574, RhoGEF64C, Rho guanine nucleotide exchange factor at 64C, [Score=135, Expect=1e-32]} {Celegans: WBGene00006468, rhgf-1, RHo Guanine nucleotide exchange Factor, [Score=61.6, Expect=1e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=60.5, Expect=3e-09]} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_040837 {REF} {Length: 489} {NoTransDecoderORF} {RNA1509_22763} {RNA1310_48876} {RNA815_25180}

Mlig455_064619 {REF} {Length: 555} {RNA1509_22763} {RNA1310_48876, RNA1509_22763} {RNA1509_22763, RNA815_25180}
17. MligTC455_11854 112 2.32 Mlig455_057286

Neo: Irradiation

Age: -

Region-specific R4: 6.358

Region-enriched R4: 5.060/0.00000

 1.878 0.955 0.923 - - - - Mlig455_057286 {REF} {Length: 793} {RNA1509_33398} {RNA1310_24396.1} {RNA815_21615}
18. MligTC455_35914 165 3.44 Mlig455_053024

Neo: Germline

Age: -

Region-specific R4: 4.962

Region-enriched R4: 4.001/0.00000

 1.878 0.972 0.906 - - - - Mlig455_053024 {REF} {Length: 1081} {RNA1509_6281} {RNA1310_36696.2} {RNA815_16776}
19. MligTC455_47009 20 0.42 Mlig455_070488

Neo: -

Age: -

 1.876 0.917 0.959 - - - - Mlig455_070488 {REF} {Length: 556} {TRANSSPLICED} {RNA1509_31914} {RNA1310_20047} {RNA815_22831}
20. MligTC455_51000 198 4.12 Mlig455_049960

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.562

Region-enriched R4: 4.208/0.00007

 1.876 0.964 0.912 - - - - Mlig455_049960 {REF} {Length: 1570} {RNA1509_26603} {RNA1310_40732.3, RNA1509_26603} {RNA1509_26603, RNA815_27303.1}
21. MligTC455_53698 115 2.39 Mlig455_013373, Mlig455_054833

Neo: Germline

Age: logFC(26M/2M)=-0.811

Region-specific R4: 6.106

 1.875 0.922 0.953 - - - -

Mlig455_013373 {REF} {Length: 1376} {Pfam: THAP domain [PF05485.14, score=40.7]} {RNA1509_58410} {RNA1310_37810} {RNA815_17175}

Mlig455_054833 {REF} {Length: 318} {NoTransDecoderORF} {RNA1509_10052} {RNA1310_14804} {RNA815_8889}
22. MligTC455_19902 117 2.43 Mlig455_022145, Mlig455_044861

Neo: Germline

Age: -

Region-specific R4: 5.228

Region-enriched R4: 4.481/0.00001

 1.871 0.953 0.918 - - - -

Mlig455_022145 {REF} {Length: 652} {RNA1310_57012} {RNA815_28837}

Mlig455_044861 {REF} {Length: 714} {RNA1310_54631} {RNA815_28837}
23. MligTC455_08868 56 1.17 Mlig455_065532

Neo: Germline

Age: Up-Down-Up, logFC(26M/2M)=1.802

Region-enriched R4: 6.299/0.00003

 1.87 0.965 0.905 - - - - Mlig455_065532 {REF} {Length: 1143} {RNA1509_9730} {RNA1310_27510, RNA1509_9730} {RNA1509_9730, RNA815_10425}
24. MligTC455_08219 7 0.14 Mlig455_049440

Neo: -

Age: -

 1.869 0.913 0.956 - - - - Mlig455_049440 {REF} {Length: 172} {NoTransDecoderORF}
25. MligTC455_11486 50 1.04 Mlig455_052772

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.597

 1.869 0.975 0.894 - - - - Mlig455_052772 {REF} {Length: 1385} {NoTransDecoderORF} {RNA1310_30802} {RNA815_43528}
26. MligTC455_18551 63 1.32 Mlig455_033246

Neo: Irradiation

Age: -

 1.868 0.977 0.891 - - - - Mlig455_033246 {REF} {Length: 1613} {RNA1509_32165} {RNA1310_17890} {RNA815_5462.1}
27. MligTC455_44130 19 0.41 Mlig455_055443

Neo: Germline

Age: -

 1.868 0.971 0.897 - - - - Mlig455_055443 {REF} {Length: 654} {RNA1509_42921} {RNA1310_29530} {RNA815_41809}
28. MligTC455_17538 158 3.29 Mlig455_000938

Neo: Germline

Age: -

Region-specific R4: 6.343

Region-enriched R4: 3.327/0.02236

 1.867 0.955 0.912 - - - - Mlig455_000938 {REF} {Length: 791} {RNA1509_37604} {RNA1310_58023, RNA1509_37604} {RNA1509_37604, RNA815_31228}
29. MligTC455_37958 107 2.24 Mlig455_052774

Neo: -

Age: Down-Up-Down

 1.862 0.977 0.885 - - - - Mlig455_052774 {REF} {Length: 1744} {RNA1509_46450} {RNA1310_47398.1} {RNA815_31782}
30. MligTC455_08963 104 2.18 Mlig455_057627

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 6.528

Region-enriched R4: 3.092/0.01961

 1.861 0.966 0.895 - - - - Mlig455_057627 {REF} {Length: 1347} {RNA1509_49959} {RNA1310_44422.1, RNA1509_49959} {RNA1509_49959, RNA815_20021.1}
31. MligTC455_12518 11 0.22 Mlig455_023552

Neo: -

Age: -

 1.861 0.906 0.955 - - - - Mlig455_023552 {REF} {Length: 673} {RNA1509_22223} {RNA1310_60769} {RNA815_31256}
32. MligTC455_48890 937 19.53 Mlig455_063442, Mlig455_063476

Neo: Germline

Age: -

Region-specific R4: 5.350

Region-enriched R4: 4.179/0.00000

 DLL4 1.861 0.954 0.907 - - - -

Mlig455_063442 {REF} {Length: 2091} {Pfam: Delta serrate ligand [PF01414.21, score=58.9]} {Human: ENSG00000128917, DLL4, delta like canonical Notch ligand 4, [Score=54.3, Expect=5e-08]} {Mouse: ENSMUSG00000027314, Dll4, delta like canonical Notch ligand 4, [Score=55.1, Expect=2e-08]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_7412} {RNA1310_30627} {RNA815_14058.1}

Mlig455_063476 {REF} {Length: 1150} {Pfam: Delta serrate ligand [PF01414.21, score=59.7]} {Human: ENSG00000128917, DLL4, delta like canonical Notch ligand 4, [Score=51.2, Expect=8e-07]; ENSG00000184916, JAG2, jagged 2, [Score=49.7, Expect=3e-06]} {Mouse: ENSMUSG00000027314, Dll4, delta like canonical Notch ligand 4, [Score=52.0, Expect=3e-07]} {Smed: dd_Smed_v6_11876_0_1, dd_Smed_v6_11876_0_1, [Score=48.1, Expect=3e-06]} {RNA1509_53382, RNA1509_7412} {RNA1310_30627, RNA1509_53382, RNA1509_7412} {RNA1509_53382, RNA1509_7412, RNA815_14058.1}
33. MligTC455_47008 37 0.76 Mlig455_046606

Neo: Irradiation

Age: -

 1.86 0.958 0.902 - - - - Mlig455_046606 {REF} {Length: 1136} {RNA1509_41845} {RNA1310_20047} {RNA815_17976.1}
34. MligTC455_34453 24 0.5 Mlig455_052246

Neo: Irradiation

Age: Up-Down-Down

Region-enriched R4: 3.366/0.04841

 PPP1CA 1.857 0.979 0.878 - - - - Mlig455_052246 {REF} {Length: 1412} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=85.2]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=3e-48]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=161, Expect=2e-47]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=158, Expect=3e-46]} {Mouse: ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=2e-48]; ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=163, Expect=2e-48]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=160, Expect=4e-47]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=158, Expect=2e-46]} {Dmel: FBgn0005779, PpD6, Protein phosphatase D6, [Score=167, Expect=7e-50]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [Score=166, Expect=7e-50]} {Smed: dd_Smed_v6_2425_0_1, dd_Smed_v6_2425_0_1, [Score=160, Expect=3e-48]} {RNA1509_8839} {RNA1310_6142.1} {RNA815_11327.2}
35. MligTC455_39234 473 9.86 Mlig455_042685

Neo: Irradiation

Age: logFC(26M/2M)=-0.485

Region-specific R4: 6.317

Region-enriched R4: 4.239/0.00000

Regeneration-downregulated R4: -2.068

Regeneration-depleted R4: -2.068

 1.856 0.950 0.906 - - - - Mlig455_042685 {REF} {Length: 1465} {RNA1509_1804} {RNA1310_22800.1, RNA1509_1804} {RNA1509_1804, RNA815_9652}
36. MligTC455_32073 43 0.9 Mlig455_043621

Neo: Irradiation

Age: -

Region-enriched R4: 3.888/0.00237

 1.855 0.971 0.884 - - - - Mlig455_043621 {REF} {Length: 2838} {RNA1509_45511} {RNA1310_28603.1} {RNA815_29511.1}
37. MligTC455_25193 10 0.22 Mlig455_011347

Neo: Irradiation

Age: Up-Down-Up

 1.852 0.991 0.861 - - - - Mlig455_011347 {REF} {Length: 1405} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=26.9]; Retrotransposon gag protein [PF03732.19, score=19.9]} {RNA1509_41435} {RNA1310_7272} {RNA815_7456}
38. MligTC455_32884 479 9.98 Mlig455_038615

Neo: Germline

Age: -

Region-specific R4: 5.450

Region-enriched R4: 3.576/0.00000

 1.851 0.967 0.884 - - - - Mlig455_038615 {REF} {Length: 1633} {RNA1509_17401} {RNA1310_25128} {RNA815_24193}
39. MligTC455_05744 92 1.92 Mlig455_024065, Mlig455_055884

Neo: -

Age: -

Region-specific R4: 6.653

Region-enriched R4: 7.259/0.00000

 1.85 0.960 0.890 - - - -

Mlig455_024065 {REF} {Length: 738} {NoTransDecoderORF} {RNA1509_48443} {RNA1310_65554, RNA1509_48443} {RNA1509_48443, RNA815_21116}

Mlig455_055884 {REF} {Length: 666} {NoTransDecoderORF} {RNA1509_48443} {RNA1310_65554} {RNA815_21116}
40. MligTC455_37340 87 1.82 Mlig455_056941

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.406

 CAPN11 1.848 0.961 0.887 - - - - Mlig455_056941 {REF} {Length: 3285} {TRANSSPLICED} {Pfam: Calpain family cysteine protease [PF00648.23, score=59.3]; Calpain large subunit, domain III [PF01067.24, score=34.0]} {Human: ENSG00000137225, CAPN11, calpain 11, [Score=75.9, Expect=1e-13]} {Mouse: ENSMUSG00000058626, Capn11, calpain 11, [Score=78.2, Expect=1e-14]} {Dmel: FBgn0012051, CalpA, Calpain-A, [Score=68.9, Expect=6e-12]} {Celegans: WBGene00000545, clp-4, CaLPain family, [Score=54.3, Expect=2e-07]} {Smed: dd_Smed_v6_4499_0_1, dd_Smed_v6_4499_0_1, [Score=62.0, Expect=7e-10]} {RNA1509_20190, RNA1509_44206, RNA1509_57673} {RNA1310_5190.1, RNA1509_20190, RNA1509_44206, RNA1509_57673} {RNA1509_20190, RNA1509_44206, RNA1509_57673, RNA815_7766}
41. MligTC455_37409 136 2.84 Mlig455_068553

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 2.269/0.01551

 1.844 0.890 0.954 - - - - Mlig455_068553 {REF} {Length: 4122} {Pfam: Protein of unknown function (DUF753) [PF05444.14, score=19.7]} {RNA1509_51360} {RNA1310_2237.1} {RNA815_726.1}
42. MligTC455_37057 113 2.36 Mlig455_059702

Neo: Germline

Age: Up-Down-Up

Region-specific R4: 5.321

Region-enriched R4: 3.904/0.00164

 1.843 0.964 0.879 - - - - Mlig455_059702 {REF} {Length: 2310} {RNA1509_45711, RNA1509_46164} {RNA1310_331, RNA1509_45711} {RNA1509_45711, RNA815_7970.1}
43. MligTC455_50926 131 2.73 Mlig455_015482

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 4.805

Region-enriched R4: 3.431/0.00001

 1.843 0.968 0.875 - - - - Mlig455_015482 {REF} {Length: 2766} {Smed: dd_Smed_v6_22487_0_1, dd_Smed_v6_22487_0_1, [Score=70.5, Expect=3e-13]} {RNA1509_3548} {RNA1310_4106} {RNA815_21210.1}
44. MligTC455_32882 375 7.81 Mlig455_038410

Neo: Irradiation

Age: -

Region-specific R4: 5.423

Region-enriched R4: 4.086/0.00000

 1.842 0.952 0.890 - - - - Mlig455_038410 {REF} {Length: 1470} {RNA1509_9260} {RNA1310_8831.1} {RNA815_12633}
45. MligTC455_18675 14 0.3 Mlig455_030130, Mlig455_071090

Neo: -

Age: -

 1.841 0.960 0.881 - - - -

Mlig455_030130 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_32086} {RNA1310_41612.1} {RNA815_51913}

Mlig455_071090 {REF} {Length: 1159} {RNA1310_134040}
46. MligTC455_03005 58 1.21 Mlig455_004257, Mlig455_004306

Neo: Germline

Age: -

 1.84 0.956 0.884 - - - -

Mlig455_004257 {REF} {Length: 330} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}

Mlig455_004306 {REF} {Length: 257} {NoTransDecoderORF} {RNA1509_32444} {RNA1310_45150} {RNA815_10124.1}
47. MligTC455_50797 68 1.41 Mlig455_017800

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.732

Region-enriched R4: 4.948/0.00001

 NEFM 1.84 0.888 0.952 - - - - Mlig455_017800 {REF} {Length: 2914} {Human: ENSG00000104722, NEFM, neurofilament medium, [RH, Score=55.5, Expect=3e-07]} {RNA1509_16831, RNA1509_43018} {RNA1310_7404, RNA1509_43018} {RNA1509_43018, RNA815_2824.1}
48. MligTC455_09971 31 0.65 Mlig455_064852

Neo: Germline

Age: -

 1.838 0.962 0.876 - - - - Mlig455_064852 {REF} {Length: 1220} {RNA1509_42137} {RNA1310_85499} {RNA815_2275.1}
49. MligTC455_32887 326 6.8 Mlig455_038614

Neo: Germline

Age: -

 1.838 0.970 0.868 - - - - Mlig455_038614 {REF} {Length: 1336} {RNA1509_7781} {RNA1310_35841.1} {RNA815_17077}
50. MligTC455_09468 270 5.63 Mlig455_030764, Mlig455_030806

Neo: -

Age: Up-Down-Up

Region-specific R4: 6.384

 PRR9 1.837 0.964 0.873 - - - -

Mlig455_030764 {REF} {Length: 432} {RNA1509_34666} {RNA1310_96435} {RNA815_49891}

Mlig455_030806 {REF} {Length: 4283} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=4e-06]} {RNA1509_32949, RNA1509_34666} {RNA1310_96435, RNA1509_32949, RNA1509_34666} {RNA1509_32949, RNA1509_34666, RNA815_49891}
51. MligTC455_18975 286 5.97 Mlig455_059132

Neo: Germline

Age: -

Region-enriched R4: 3.652/0.00001

 1.837 0.950 0.887 - - - - Mlig455_059132 {REF} {Length: 1515} {RNA1509_35598} {RNA1310_23207.1} {RNA815_10106}
52. MligTC455_31338 436 9.08 Mlig455_019988, Mlig455_027844, Mlig455_036853, Mlig455_040495, Mlig455_040496, Mlig455_051878, Mlig455_070985

Neo: -

Age: Up-Down-Down

Region-specific R4: 4.817

Region-enriched R4: 4.146/0.00029

 NYNRIN 1.836 0.959 0.877 - - - -

Mlig455_019988 {REF} {Length: 2150} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.7]; Integrase core domain [PF13683.8, score=19.1]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=114, Expect=2e-26]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_027844 {REF} {Length: 2192} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.3]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.1]; Integrase core domain [PF00665.28, score=46.4]; Integrase core domain [PF13683.8, score=19.2]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=8e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=92.8, Expect=7e-19]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=112, Expect=7e-26]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_036853 {REF} {Length: 3565} {Pfam: Integrase zinc binding domain [PF17921.3, score=59.7]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=54.7]; Integrase core domain [PF00665.28, score=46.0]; Zinc knuckle [PF00098.25, score=18.7]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=2e-17]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=92.8, Expect=2e-18]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=127, Expect=2e-29]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_040495 {REF} {Length: 1109} {RNA1509_25498} {RNA1310_33494, RNA1509_25498} {RNA1509_25498, RNA815_15678.1}

Mlig455_040496 {REF} {Length: 4434} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=108.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=76.4]; Integrase zinc binding domain [PF17921.3, score=59.3]; Integrase core domain [PF00665.28, score=46.1]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=89.0, Expect=4e-17]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=1e-21]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [RH, Score=103, Expect=1e-21]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=334, Expect=5e-97]} {RNA1509_18367} {RNA1310_1117.1, RNA1509_18367} {RNA1509_18367, RNA815_895.1}

Mlig455_051878 {REF} {Length: 2123} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=46.6]; Integrase core domain [PF00665.28, score=44.7]; Integrase core domain [PF13683.8, score=18.9]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=8e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=89.7, Expect=7e-18]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=90.9, Expect=6e-19]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}

Mlig455_070985 {REF} {Length: 3554} {Pfam: Integrase zinc binding domain [PF17921.3, score=61.4]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=55.6]; Integrase core domain [PF00665.28, score=47.3]; Integrase core domain [PF13683.8, score=19.0]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=90.1, Expect=7e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=92.8, Expect=7e-19]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=113, Expect=3e-26]} {RNA1509_18367} {RNA1310_1117.1} {RNA815_895.1}
53. MligTC455_34450 23 0.48 Mlig455_052287

Neo: -

Age: -

 PPP1CA 1.836 0.959 0.877 - - - - Mlig455_052287 {REF} {Length: 1273} {Pfam: Calcineurin-like phosphoesterase [PF00149.30, score=83.4]} {Human: ENSG00000172531, PPP1CA, protein phosphatase 1 catalytic subunit alpha, [Score=147, Expect=8e-43]; ENSG00000186298, PPP1CC, protein phosphatase 1 catalytic subunit gamma, [Score=145, Expect=4e-42]; ENSG00000213639, PPP1CB, protein phosphatase 1 catalytic subunit beta, [Score=142, Expect=6e-41]} {Mouse: ENSMUSG00000040385, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=147, Expect=6e-43]; ENSMUSG00000096994, Ppp1ca, protein phosphatase 1 catalytic subunit alpha, [Score=147, Expect=6e-43]; ENSMUSG00000004455, Ppp1cc, protein phosphatase 1 catalytic subunit gamma, [Score=144, Expect=7e-42]; ENSMUSG00000014956, Ppp1cb, protein phosphatase 1 catalytic subunit beta, [Score=142, Expect=4e-41]} {Dmel: FBgn0261399, Pp1-Y1, Protein phosphatase 1, Y-linked 1, [Score=148, Expect=8e-44]} {Celegans: WBGene00001748, gsp-2, Serine/threonine-protein phosphatase PP1-beta, [Score=151, Expect=8e-45]} {Smed: dd_Smed_v6_2425_0_1, dd_Smed_v6_2425_0_1, [Score=144, Expect=8e-43]} {RNA1509_8839} {RNA1310_6142.1} {RNA815_11327.2}
54. MligTC455_13814 28 0.58 Mlig455_056136

Neo: Int S/G2/M

Age: -

Region-enriched R4: 5.042/0.00008

 1.835 0.958 0.877 - - - - Mlig455_056136 {REF} {Length: 1151} {RNA1310_29105} {RNA815_44614}
55. MligTC455_06664 63 1.32 Mlig455_010697, Mlig455_010802

Neo: -

Age: Up-Down-Down

 1.833 0.956 0.877 - - - -

Mlig455_010697 {REF} {Length: 438} {Mouse: ENSMUSG00000068078, 2310034C09Rik, RIKEN cDNA 2310034C09 gene, [RH, Score=45.4, Expect=1e-06]} {RNA1509_55894}

Mlig455_010802 {REF} {Length: 505} {NoTransDecoderORF} {RNA1509_55894}
56. MligTC455_09491 102 2.13 Mlig455_019935

Neo: Germline

Age: logFC(26M/2M)=-0.411

Region-enriched R4: 5.132/0.00004

 1.831 0.959 0.872 - - - - Mlig455_019935 {REF} {Length: 1428} {Pfam: Tetraspanin family [PF00335.22, score=80.7]} {Mouse: ENSMUSG00000025351, Cd63, CD63 antigen, [Score=47.0, Expect=6e-06]} {RNA1509_7651} {RNA1310_24634} {RNA815_10380.1}
57. MligTC455_21732 13 0.27 Mlig455_006718

Neo: -

Age: -

 1.831 0.870 0.961 - - - - Mlig455_006718 {REF} {Length: 2049} {Celegans: WBGene00015646, mlt-10, [Score=154, Expect=1e-42]} {RNA1509_8154} {RNA1310_936} {RNA815_2209}
58. MligTC455_08964 74 1.54 Mlig455_060167

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.843

 1.829 0.970 0.859 - - - - Mlig455_060167 {REF} {Length: 1981} {RNA1509_28937} {RNA1310_44422.3} {RNA815_20021.1}
59. MligTC455_10109 293 6.1 Mlig455_048170, Mlig455_048192

Neo: Irradiation

Age: -

Region-specific R4: 5.686

Region-enriched R4: 4.002/0.00000

 1.828 0.956 0.872 - - - -

Mlig455_048170 {REF} {Length: 1500} {RNA1509_24982} {RNA1310_29998} {RNA815_15111}

Mlig455_048192 {REF} {Length: 1497} {RNA1509_24982} {RNA1310_29998} {RNA815_15111}
60. MligTC455_17173 46 0.96 Mlig455_059401

Neo: -

Age: Up-Down-Up

Region-enriched R4: 6.142/0.00000

 1.828 0.961 0.867 - - - - Mlig455_059401 {REF} {Length: 798} {RNA1310_42556} {RNA815_63393}
61. MligTC455_50798 63 1.3 Mlig455_017810

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.336

Region-specific R4: 6.736

Region-enriched R4: 4.515/0.00020

 NEFM 1.828 0.976 0.852 - - - - Mlig455_017810 {REF} {Length: 2787} {Human: ENSG00000104722, NEFM, neurofilament medium, [Score=50.4, Expect=9e-06]} {Dmel: FBgn0053196, dpy, dumpy, [Score=53.9, Expect=6e-07]} {RNA1509_16831} {RNA1310_7404, RNA1509_16831} {RNA1509_16831, RNA815_2824.1}
62. MligTC455_31709 310 6.45 Mlig455_057287

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 4.738

Region-enriched R4: 2.936/0.00001

 CLCA4 1.825 0.952 0.873 - - - - Mlig455_057287 {REF} {Length: 5345} {Pfam: von Willebrand factor type A domain [PF13519.8, score=48.0]; Calcium-activated chloride channel N terminal [PF08434.13, score=41.0]; von Willebrand factor type A domain [PF13768.8, score=39.6]; von Willebrand factor type A domain [PF00092.30, score=33.9]; VWA domain containing CoxE-like protein [PF05762.16, score=20.7]} {Human: ENSG00000016602, CLCA4, chloride channel accessory 4, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000068547, Clca4a, chloride channel accessory 4A, [Score=96.7, Expect=5e-20]; ENSMUSG00000074195, Clca4b, chloride channel accessory 4B, [Score=92.0, Expect=1e-18]} {Smed: dd_Smed_v6_968_0_1, dd_Smed_v6_968_0_1, [Score=115, Expect=5e-26]} {RNA1509_49579} {RNA1310_7037.2, RNA1509_49579} {RNA1509_49579, RNA815_717.3}
63. MligTC455_47676 221 4.61 Mlig455_004999

Neo: Irradiation

Age: Up-Down-Down

Region-specific R4: 5.655

Region-enriched R4: 3.894/0.00000

Regeneration-downregulated R4: -2.977

Regeneration-depleted R4: -2.977

 1.825 0.951 0.874 - - - - Mlig455_004999 {REF} {Length: 1868} {RNA1509_39325} {RNA1310_11534.1} {RNA815_3858.2}
64. MligTC455_15144 24 0.49 Mlig455_044189

Neo: Germline

Age: Down-Up-Down

Region-enriched R4: 3.732/0.00994

 1.824 0.976 0.848 - - - - Mlig455_044189 {REF} {Length: 1011} {NoTransDecoderORF} {RNA1310_45181} {RNA815_19245}
65. MligTC455_10278 80 1.66 Mlig455_045385

Neo: Irradiation

Age: logFC(26M/2M)=-0.489

Region-enriched R4: 3.490/0.00114

 1.822 0.858 0.964 - - - - Mlig455_045385 {REF} {Length: 1603} {Pfam: Integrase core domain [PF00665.28, score=37.6]} {RNA1509_29486} {RNA1310_21626, RNA1509_29486} {RNA1509_29486, RNA815_8923.1}
66. MligTC455_44399 246 5.13 Mlig455_021182, Mlig455_057884

Neo: -

Age: Up-Down-Up

Region-specific R4: 6.866

Region-enriched R4: 4.534/0.00125

 1.822 0.973 0.849 - - - -

Mlig455_021182 {REF} {Length: 911} {RNA1509_6315} {RNA1310_29655} {RNA815_4464.1}

Mlig455_057884 {REF} {Length: 1187} {RNA1509_6315} {RNA1310_35785} {RNA815_17495}
67. MligTC455_33566 27 0.56 Mlig455_041108, Mlig455_057624

Neo: -

Age: -

Region-enriched R2: 7.159/0.00089

 CNBP 1.819 0.863 0.956 - - - -

Mlig455_041108 {REF} {Length: 2520} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=103.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=78.6]; Integrase zinc binding domain [PF17921.3, score=67.0]; Integrase core domain [PF00665.28, score=45.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=23.6]; Zinc knuckle [PF00098.25, score=22.8]} {Human: ENSG00000169714, CNBP, CCHC-type zinc finger nucleic acid binding protein, [Score=49.7, Expect=3e-06]} {Mouse: ENSMUSG00000061186, Sfmbt2, Scm-like with four mbt domains 2, [Score=65.5, Expect=2e-10]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=94.4, Expect=1e-20]} {RNA1509_38544} {RNA1310_2645.1} {RNA815_16906}

Mlig455_057624 {REF} {Length: 1616} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=79.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=24.0]} {Smed: dd_Smed_v6_15498_0_18, dd_Smed_v6_15498_0_18, [Score=92.0, Expect=3e-20]} {RNA1509_38544} {RNA1310_2645.1} {RNA815_16906}
68. MligTC455_33924 42 0.87 Mlig455_058587

Neo: Germline

Age: Up-Down-Down

Region-enriched R4: 3.836/0.01199

 1.816 0.961 0.855 - - - - Mlig455_058587 {REF} {Length: 1664} {NoTransDecoderORF} {RNA1509_42119} {RNA1310_39896.2} {RNA815_16973}
69. MligTC455_08785 9 0.2 Mlig455_067653

Neo: -

Age: -

 1.806 0.962 0.844 - - - - Mlig455_067653 {REF} {Length: 1107} {RNA1310_91815} {RNA815_10183.3}
70. MligTC455_09926 70 1.47 Mlig455_025816

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 7.101

Region-enriched R4: 4.629/0.00490

 1.804 0.952 0.852 - - - - Mlig455_025816 {REF} {Length: 1953} {RNA1509_26184, RNA1509_32110} {RNA1310_7987, RNA1509_26184} {RNA1509_26184, RNA815_4326}
71. MligTC455_26211 33 0.68 Mlig455_052565

Neo: Irradiation

Age: Up-Down-Down

 1.804 0.977 0.827 - - - - Mlig455_052565 {REF} {Length: 1850} {Pfam: WSC domain [PF01822.21, score=22.6]} {RNA1509_18417} {RNA1310_74668} {RNA815_2520.1}
72. MligTC455_36235 135 2.82 Mlig455_025893

Neo: Germline

Age: -

Region-specific R4: 5.829

Region-enriched R4: 3.850/0.01505

 1.804 0.970 0.834 - - - - Mlig455_025893 {REF} {Length: 769} {RNA1509_42448} {RNA1310_37163.2} {RNA815_26896}
73. MligTC455_45868 56 1.16 Mlig455_012764, Mlig455_021163, Mlig455_057862

Neo: Int S/G2/M

Age: -

 1.804 0.965 0.839 - - - -

Mlig455_012764 {REF} {Length: 2288} {Pfam: F5/8 type C domain [PF00754.27, score=29.4]} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}

Mlig455_021163 {REF} {Length: 2502} {Pfam: F5/8 type C domain [PF00754.27, score=19.7]} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}

Mlig455_057862 {REF} {Length: 4610} {RNA1509_36146} {RNA1310_40043.1} {RNA815_38807}
74. MligTC455_30201 49 1.02 Mlig455_006805

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.603

 SCNN1B 1.802 0.954 0.848 - - - - Mlig455_006805 {REF} {Length: 2461} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=193.3]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=54.7, Expect=3e-07]; ENSG00000166828, SCNN1G, sodium channel epithelial 1 gamma subunit, [Score=54.7, Expect=4e-07]} {Mouse: ENSMUSG00000038276, Asic3, acid-sensing (proton-gated) ion channel 3, [Score=58.2, Expect=2e-08]; ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=55.5, Expect=1e-07]} {Celegans: WBGene00012137, asic-2, Degenerin-like protein asic-2, [Score=53.9, Expect=2e-07]} {Smed: dd_Smed_v6_17245_0_1, dd_Smed_v6_17245_0_1, [Score=95.1, Expect=2e-20]} {RNA1509_36956} {RNA1310_12232.1} {RNA815_4577.1}
75. MligTC455_50919 190 3.96 Mlig455_031585

Neo: Germline

Age: -

Region-specific R4: 6.389

Region-enriched R4: 2.911/0.00105

 1.8 0.957 0.843 - - - - Mlig455_031585 {REF} {Length: 1283} {RNA1509_47688} {RNA1310_28031.2, RNA1509_47688} {RNA1509_47688, RNA815_13214.1}
76. MligTC455_32883 1153 24.03 Mlig455_015037, Mlig455_038471

Neo: Germline

Age: -

Region-specific R4: 5.467

Region-enriched R4: 4.202/0.00000

 1.798 0.951 0.847 - - - -

Mlig455_015037 {REF} {Length: 2794} {RNA1509_9260} {RNA1310_35841.1} {RNA815_12633}

Mlig455_038471 {REF} {Length: 1032} {RNA1509_9260} {RNA1310_8831.1} {RNA815_12633}
77. MligTC455_24648 100 2.09 Mlig455_019953

Neo: Germline

Age: -

Region-enriched R4: 4.731/0.00001

 GLIPR1 1.797 0.975 0.822 - - - - Mlig455_019953 {REF} {Length: 3117} {Pfam: Cysteine-rich secretory protein family [PF00188.28, score=77.8]} {Human: ENSG00000139278, GLIPR1, GLI pathogenesis related 1, [RH, Score=99.4, Expect=2e-22]} {Mouse: ENSMUSG00000056888, Glipr1, GLI pathogenesis-related 1 (glioma), [Score=98.2, Expect=2e-22]} {Celegans: WBGene00011724, scl-18, SCP-Like extracellular protein, [Score=52.4, Expect=3e-07]} {Smed: dd_Smed_v6_2021_0_1, dd_Smed_v6_2021_0_1, [Score=121, Expect=2e-28]} {RNA1509_48050} {RNA1310_12767.1} {RNA815_4203.1}
78. MligTC455_50142 6 0.12 Mlig455_011350

Neo: -

Age: -

 1.797 0.980 0.817 - - - - Mlig455_011350 {REF} {Length: 196} {NoTransDecoderORF} {RNA1509_41435} {RNA1310_24697} {RNA815_7456}
79. MligTC455_30717 16 0.32 Mlig455_038408

Neo: Germline

Age: -

Region-enriched R4: 6.585/0.04772

 1.795 0.950 0.845 - - - - Mlig455_038408 {REF} {Length: 644} {RNA1509_17401} {RNA1310_63118} {RNA815_22702.2}
80. MligTC455_49312 8 0.16 Mlig455_051046

Neo: -

Age: -

 WNT5A 1.793 0.977 0.816 - - - - Mlig455_051046 {REF} {Length: 2120} {Pfam: wnt family [PF00110.21, score=184.2]} {Human: ENSG00000114251, WNT5A, Wnt family member 5A, [Score=147, Expect=8e-43]; ENSG00000002745, WNT16, Wnt family member 16, [Score=144, Expect=7e-42]; ENSG00000111186, WNT5B, Wnt family member 5B, [Score=143, Expect=2e-41]} {Mouse: ENSMUSG00000021994, Wnt5a, wingless-type MMTV integration site family, member 5A, [Score=147, Expect=6e-43]; ENSMUSG00000030170, Wnt5b, wingless-type MMTV integration site family, member 5B, [Score=144, Expect=2e-42]; ENSMUSG00000029671, Wnt16, wingless-type MMTV integration site family, member 16, [Score=143, Expect=2e-41]} {Dmel: FBgn0010194, Wnt5, Wnt oncogene analog 5, [RH, Score=155, Expect=7e-44]} {Celegans: WBGene00000857, cwn-1, [Score=135, Expect=1e-38]} {Smed: dd_Smed_v6_15469_0_1, dd_Smed_v6_15469_0_1, [Score=139, Expect=2e-40]} {RNA1509_36146} {RNA1310_8772.2} {RNA815_7310}
81. MligTC455_11879 115 2.4 Mlig455_022135, Mlig455_044851

Neo: Germline

Age: -

Region-specific R4: 7.266

Regeneration-upregulated R4: 5.324

Regeneration-enriched R4: 5.324

 1.791 0.966 0.825 - - - -

Mlig455_022135 {REF} {Length: 1384} {RNA1310_28618} {RNA815_36494}

Mlig455_044851 {REF} {Length: 1695} {RNA1310_28618} {RNA815_36494}
82. MligTC455_14406 103 2.15 Mlig455_002589

Neo: Irradiation

Age: Up-Down-Down

 1.791 0.840 0.951 - - - - Mlig455_002589 {REF} {Length: 1277} {NoTransDecoderORF} {RNA1509_10088, RNA1509_30779, RNA1509_49666} {RNA1310_40837, RNA1509_10088, RNA1509_30779, RNA1509_49666} {RNA1509_10088, RNA1509_30779, RNA1509_49666, RNA815_26697}
83. MligTC455_05295 14 0.28 Mlig455_059005

Neo: -

Age: -

 1.787 0.955 0.832 - - - - Mlig455_059005 {REF} {Length: 2036} {RNA1509_48191} {RNA1310_47921} {RNA815_39328}
84. MligTC455_18549 35 0.72 Mlig455_003836

Neo: -

Age: Up-Down-Down

 1.781 0.970 0.811 - - - - Mlig455_003836 {REF} {Length: 1990} {RNA1509_32165} {RNA1310_13450} {RNA815_5462.1}
85. MligTC455_21736 54 1.12 Mlig455_023919, Mlig455_040958, Mlig455_057346

Neo: Germline

Age: logFC(26M/2M)=-0.873

 RTL1 1.775 0.817 0.958 - - - -

Mlig455_023919 {REF} {Length: 557} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=93.2]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=85.0]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=47.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=76.3, Expect=1e-14]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=174, Expect=5e-49]} {RNA1509_49309} {RNA1310_936} {RNA815_13565}

Mlig455_040958 {REF} {Length: 4329} {Pfam: Integrase core domain [PF00665.28, score=33.0]; Integrase core domain [PF13683.8, score=23.1]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=58.5, Expect=5e-10]} {RNA1509_30470} {RNA1310_936} {RNA815_2209}

Mlig455_057346 {REF} {Length: 4336} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=109.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=109.2]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=90.8]; Integrase zinc binding domain [PF17921.3, score=61.0]; Integrase core domain [PF00665.28, score=42.4]; H2C2 zinc finger [PF09337.12, score=36.4]; gag-polyprotein putative aspartyl protease [PF13975.8, score=24.7]; Integrase core domain [PF13683.8, score=20.4]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=77.8, Expect=1e-13]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=264, Expect=4e-73]} {RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1310_936, RNA1509_30470, RNA1509_49309, RNA1509_8154} {RNA1509_30470, RNA1509_49309, RNA1509_8154, RNA815_2209}
86. MligTC455_05558 34 0.71 Mlig455_019821

Neo: -

Age: logFC(26M/2M)=0.687

Region-enriched R4: 5.756/0.00061

 1.773 0.815 0.958 - - - - Mlig455_019821 {REF} {Length: 1251} {NoTransDecoderORF} {RNA1310_35019} {RNA815_8697}
87. MligTC455_37056 212 4.42 Mlig455_015938

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 5.924

Region-enriched R4: 3.197/0.00031

 1.763 0.950 0.813 - - - - Mlig455_015938 {REF} {Length: 2844} {RNA1509_46164} {RNA1310_331, RNA1509_46164} {RNA1509_46164, RNA815_7970.1}
88. MligTC455_44107 322 6.7 Mlig455_017804

Neo: Germline

Age: Up-Down-Down, logFC(26M/2M)=-0.481

Region-specific R4: 5.523

Region-enriched R4: 3.471/0.00038

 1.763 0.813 0.950 - - - - Mlig455_017804 {REF} {Length: 2802} {RNA1509_27258, RNA1509_49173, RNA1509_5155} {RNA1310_7200, RNA1509_27258, RNA1509_49173} {RNA1509_27258, RNA1509_49173, RNA815_10121.2}
89. MligTC455_10715 16 0.33 Mlig455_003415

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.674

Regeneration-downregulated R4: -6.044

Regeneration-depleted R4: -6.044

 1.762 0.967 0.795 - - - - Mlig455_003415 {REF} {Length: 436} {NoTransDecoderORF} {RNA1509_24834} {RNA1310_5898.1} {RNA815_31793}
90. MligTC455_11331 16 0.34 Mlig455_057603

Neo: -

Age: Up-Down-Down

Region-enriched R4: 4.551/0.00719

 1.761 0.802 0.959 - - - - Mlig455_057603 {REF} {Length: 2457} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.0]} {RNA1509_7952} {RNA1310_7617} {RNA815_31120}
91. MligTC455_49828 595 12.39 Mlig455_070285

Neo: Germline

Age: Up-Down-Down

Region-specific R4: 6.587

Region-enriched R4: 2.578/0.00199

 TUBA1C 1.758 0.950 0.808 - - - - Mlig455_070285 {REF} {Length: 1795} {Pfam: Tubulin/FtsZ family, GTPase domain [PF00091.27, score=217.8]; Tubulin C-terminal domain [PF03953.19, score=171.6]} {Human: ENSG00000167553, TUBA1C, tubulin alpha 1c, [Score=756, Expect=0.0]; ENSG00000123416, TUBA1B, tubulin alpha 1b, [Score=754, Expect=0.0]; ENSG00000075886, TUBA3D, tubulin alpha 3d, [Score=753, Expect=0.0]; ENSG00000198033, TUBA3C, tubulin alpha 3c, [Score=753, Expect=0.0]; ENSG00000167552, TUBA1A, tubulin alpha 1a, [Score=752, Expect=0.0]; ENSG00000127824, TUBA4A, tubulin alpha 4a, [Score=745, Expect=0.0]; ENSG00000152086, TUBA3E, tubulin alpha 3e, [Score=743, Expect=0.0]; ENSG00000183785, TUBA8, tubulin alpha 8, [Score=733, Expect=0.0]} {Mouse: ENSMUSG00000043091, Tuba1c, tubulin, alpha 1C, [Score=757, Expect=0.0]; ENSMUSG00000023004, Tuba1b, tubulin, alpha 1B, [Score=754, Expect=0.0]; ENSMUSG00000067702, Tuba3a, tubulin, alpha 3A, [Score=753, Expect=0.0]; ENSMUSG00000067338, Tuba3b, tubulin, alpha 3B, [Score=753, Expect=0.0]; ENSMUSG00000072235, Tuba1a, tubulin, alpha 1A, [Score=752, Expect=0.0]; ENSMUSG00000026202, Tuba4a, tubulin, alpha 4A, [Score=745, Expect=0.0]; ENSMUSG00000030137, Tuba8, tubulin, alpha 8, [Score=732, Expect=0.0]} {Dmel: FBgn0003884, alphaTub84B, alpha-Tubulin at 84B, [Score=747, Expect=0.0]} {Celegans: WBGene00006529, tba-2, Tubulin alpha-2 chain, [Score=737, Expect=0.0]} {Smed: dd_Smed_v6_124_0_1, dd_Smed_v6_124_0_1, [Score=723, Expect=0.0]} {RNA1509_11310, RNA1509_19951, RNA1509_23535} {RNA1310_16392.1, RNA1509_11310, RNA1509_19951, RNA1509_23535} {RNA1509_11310, RNA1509_19951, RNA1509_23535, RNA815_6652}
92. MligTC455_27265 100 2.08 Mlig455_059999

Neo: -

Age: -

 1.756 0.792 0.964 - - - - Mlig455_059999 {REF} {Length: 1244} {Pfam: Cell division protein ZapB [PF06005.14, score=22.4]} {RNA1509_34331} {RNA1310_24939, RNA1509_34331} {RNA1509_34331, RNA815_13293}
93. MligTC455_50141 21 0.44 Mlig455_011349

Neo: -

Age: -

 1.753 0.972 0.781 - - - - Mlig455_011349 {REF} {Length: 1517} {Pfam: Integrase core domain [PF00665.28, score=51.4]; Integrase core domain [PF13683.8, score=28.4]; DDE superfamily endonuclease [PF13358.8, score=28.3]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=70.9, Expect=5e-14]} {RNA1509_41435} {RNA1310_24697} {RNA815_7456}
94. MligTC455_31667 14 0.3 Mlig455_047051

Neo: -

Age: Down-Down-Down

 1.751 0.966 0.785 - - - - Mlig455_047051 {REF} {Length: 3464} {RNA1509_2515} {RNA1310_28603.1} {RNA815_3258.1}
95. MligTC455_28939 158 3.3 Mlig455_051092

Neo: Germline

Age: -

Region-specific R4: 6.221

Region-enriched R4: 4.354/0.00000

 1.746 0.952 0.794 - - - - Mlig455_051092 {REF} {Length: 3433} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=62.9]} {RNA1509_17512} {RNA1310_14948} {RNA815_4608.1}
96. MligTC455_12754 29 0.61 Mlig455_055984, Mlig455_056091

Neo: -

Age: Down-Up-Down

 1.745 0.967 0.778 - - - -

Mlig455_055984 {REF} {Length: 236} {NoTransDecoderORF} {RNA1310_75562} {RNA815_42187}

Mlig455_056091 {REF} {Length: 966} {RNA1310_75562} {RNA815_42187}
97. MligTC455_19791 6 0.13 Mlig455_011291

Neo: -

Age: -

 1.741 0.952 0.789 - - - - Mlig455_011291 {REF} {Length: 1008} {NoTransDecoderORF} {RNA1509_14401} {RNA1310_29512} {RNA815_34442}
98. MligTC455_12852 178 3.7 Mlig455_014152

Neo: Int S/G2/M

Age: Up-Down-Down

Region-specific R4: 5.817

 1.74 0.782 0.958 - - - - Mlig455_014152 {REF} {Length: 1814} {RNA1509_42412} {RNA1310_6102, RNA1509_42412} {RNA1509_42412, RNA815_18587}
99. MligTC455_02959 13 0.27 Mlig455_062902

Neo: -

Age: -

 1.737 0.972 0.765 - - - - Mlig455_062902 {REF} {Length: 1152} {RNA1509_30715} {RNA1310_26336} {RNA815_38021}
100. MligTC455_03900 48 1.01 Mlig455_036053, Mlig455_054090

Neo: Germline

Age: Down-Down-Up

Region-enriched R4: 5.227/0.00526

 1.737 0.963 0.774 - - - -

Mlig455_036053 {REF} {Length: 1013} {RNA1310_49209} {RNA815_35917}

Mlig455_054090 {REF} {Length: 1385} {Pfam: Phage integrase family [PF00589.24, score=20.6]} {RNA1310_49209} {RNA815_35917}

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