Data search


search
Exact
Search

Results for MligTC455_08549

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_08549 19 0.40 Mlig455_044281

Neo: -

Age: -

Mlig455_044281 {REF} {Length: 1325} {NoTransDecoderORF} {RNA1310_47481} {RNA815_20504}

Cumulative graph for MligTC455_08549

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.095 0.739 1.00000 1.00000
RegionR2 1.898 0.739 0.99961 1.00000
RegionR3 -0.195 0.739 0.99992 1.00000
RegionR4 -2.102 0.739 0.99963 1.00000
RegionR5 -1.077 0.739 0.99986 1.00000
RegionR6 -0.29 0.739 0.99990 1.00000
RegionR7 1.176 0.739 1.00000 1.00000
RegionR8 1.684 0.739 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 1.003 0.739 1.00000 1.00000
RegenerationR2 1.922 0.739 0.13726 0.56541
RegenerationR3 3.581 0.739 0.29156 0.72351
RegenerationR4 3.582 0.739 0.36697 0.79158
RegenerationR5 3.791 0.739 0.14651 0.56316
RegenerationR6 1.875 0.739 0.40399 0.74041
RegenerationBL -0.993 0.739 0.99991 1.00000
RegenerationTP -0.47 0.739 1.00000 1.00000


Genes with expression patterns similar to MligTC455_08549

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_08549 19 0.4 Mlig455_044281

Neo: -

Age: -

2 - - - - 1.000 1.000 Mlig455_044281 {REF} {Length: 1325} {NoTransDecoderORF} {RNA1310_47481} {RNA815_20504}
2. MligTC455_20936 149 3.11 Mlig455_022961

Neo: -

Age: -

SLC35B2 0.982 - - - - 0.982 - Mlig455_022961 {REF} {Length: 3403} {Pfam: UAA transporter family [PF08449.13, score=110.5]; Triose-phosphate Transporter family [PF03151.18, score=19.9]} {Human: ENSG00000157593, SLC35B2, solute carrier family 35 member B2, [Score=173, Expect=6e-48]} {Mouse: ENSMUSG00000037089, Slc35b2, solute carrier family 35, member B2, [Score=172, Expect=2e-48]} {Dmel: FBgn0038524, sll, slalom, [Score=189, Expect=6e-54]} {Celegans: WBGene00004206, pst-1, Adenosine 3'-phospho 5'-phosphosulfate transporter 1, [Score=143, Expect=1e-37]} {Smed: dd_Smed_v6_6703_0_2, dd_Smed_v6_6703_0_2, [Score=184, Expect=4e-52]} {RNA1509_54238} {RNA1310_21943.1, RNA1509_54238} {RNA1509_54238, RNA815_11106.1}
3. MligTC455_14961 39 0.82 Mlig455_048867

Neo: -

Age: -

0.976 - - - - 0.976 - Mlig455_048867 {REF} {Length: 979} {NoTransDecoderORF} {RNA1310_98124}
4. MligTC455_22091 16 0.33 Mlig455_007206

Neo: -

Age: -

PRR9 0.963 - - - - 0.963 - Mlig455_007206 {REF} {Length: 2075} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=50.8, Expect=1e-07]} {RNA1310_45787}
5. MligTC455_27537 384 8 Mlig455_006514, Mlig455_006630

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=0.415

Region-enriched R4: 5.650/0.00051

CRB2, NOTCH2 0.955 - - - - 0.955 -

Mlig455_006514 {REF} {Length: 4855} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=175.4]; Human growth factor-like EGF [PF12661.9, score=89.0]; Laminin G domain [PF02210.26, score=30.6]} {Human: ENSG00000134250, NOTCH2, notch 2, [Score=263, Expect=2e-70]} {Mouse: ENSMUSG00000027878, Notch2, notch 2, [Score=262, Expect=3e-70]} {Dmel: FBgn0004647, N, Notch, [Score=258, Expect=3e-69]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=191, Expect=2e-48]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=187, Expect=1e-47]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_9776.1}

Mlig455_006630 {REF} {Length: 4640} {Pfam: EGF-like domain [PF00008.29, score=165.3]; Human growth factor-like EGF [PF12661.9, score=85.9]; Laminin G domain [PF02210.26, score=31.0]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=334, Expect=1e-95]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=333, Expect=5e-95]} {Dmel: FBgn0259685, crb, crumbs, [Score=422, Expect=5e-123]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=237, Expect=5e-63]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=253, Expect=5e-68]} {RNA1509_54879} {RNA1310_14888.1} {RNA815_693.1}
6. MligTC455_01097 48 0.99 Mlig455_029156

Neo: -

Age: -

0.952 - - - - 0.952 - Mlig455_029156 {REF} {Length: 1154} {NoTransDecoderORF} {RNA1310_90423}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA